RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TMEM87AQ8NBN3 555 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 NMRK2Q9NPI5 230 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 SNCAIPQ9Y6H5 919 aa20.93■□□□□ 0.94
SMARCD3-202ENST00000356800 BTBD18B2RXH4 712 aa20.92■□□□□ 0.94
SMARCD3-202ENST00000356800 DGKZQ13574 1117 aa20.92■□□□□ 0.94
SMARCD3-202ENST00000356800 MOB2Q70IA6 237 aa20.92■□□□□ 0.94
SMARCD3-202ENST00000356800 HEATR3Q7Z4Q2 680 aa20.92■□□□□ 0.94
SMARCD3-202ENST00000356800 DIS3L2Q8IYB7 885 aaKnown RBP20.92■□□□□ 0.94
SMARCD3-202ENST00000356800 OXER1Q8TDS5 423 aa20.92■□□□□ 0.94
SMARCD3-202ENST00000356800 SH3GLB2Q9NR46 395 aa20.92■□□□□ 0.94
SMARCD3-202ENST00000356800 BARHL2Q9NY43 387 aa20.92■□□□□ 0.94
SMARCD3-202ENST00000356800 ADAMTS3O15072 1205 aa20.91■□□□□ 0.94
SMARCD3-202ENST00000356800 PRPF40AO75400 957 aaKnown RBP20.91■□□□□ 0.94
SMARCD3-202ENST00000356800 SPP2Q13103 211 aa20.91■□□□□ 0.94
SMARCD3-202ENST00000356800 MTMR2Q13614 643 aa20.91■□□□□ 0.94
SMARCD3-202ENST00000356800 GDPD2Q9HCC8 539 aa20.91■□□□□ 0.94
SMARCD3-202ENST00000356800 SEC63Q9UGP8 760 aaKnown RBP20.91■□□□□ 0.94
SMARCD3-202ENST00000356800 ZHX2Q9Y6X8 837 aa20.91■□□□□ 0.94
SMARCD3-202ENST00000356800 PTPRFP10586 1907 aa20.91■□□□□ 0.94
SMARCD3-202ENST00000356800 TRAF5O00463 557 aa20.9■□□□□ 0.94
SMARCD3-202ENST00000356800 PPP1R11O60927 126 aaPredicted RBP20.9■□□□□ 0.94
SMARCD3-202ENST00000356800 NF2P35240 595 aa20.9■□□□□ 0.94
SMARCD3-202ENST00000356800 FMR1Q06787 632 aaKnown RBP eCLIP20.9■□□□□ 0.94
SMARCD3-202ENST00000356800 BRAPQ7Z569 592 aa20.9■□□□□ 0.94
SMARCD3-202ENST00000356800 ZNF280CQ8ND82 737 aa20.9■□□□□ 0.94
SMARCD3-202ENST00000356800 EMILIN3Q9NT22 766 aa20.9■□□□□ 0.94
SMARCD3-202ENST00000356800 TFIP11Q9UBB9 837 aaKnown RBP20.9■□□□□ 0.94
SMARCD3-202ENST00000356800 PNMA6FA0A0J9YX94 578 aa20.89■□□□□ 0.94
SMARCD3-202ENST00000356800 IREB2P48200 963 aaKnown RBP20.89■□□□□ 0.94
SMARCD3-202ENST00000356800 KRT85P78386 507 aa20.89■□□□□ 0.94
SMARCD3-202ENST00000356800 NR5A1Q13285 461 aa20.89■□□□□ 0.94
SMARCD3-202ENST00000356800 SAFBQ15424 915 aaKnown RBP eCLIP20.89■□□□□ 0.94
SMARCD3-202ENST00000356800 SYDE2Q5VT97 1194 aa20.89■□□□□ 0.94
SMARCD3-202ENST00000356800 ZNF526Q8TF50 670 aaPredicted RBP20.89■□□□□ 0.94
SMARCD3-202ENST00000356800 FOXP1Q9H334 677 aaPredicted RBP20.89■□□□□ 0.94
SMARCD3-202ENST00000356800 AS3MTQ9HBK9 375 aa20.89■□□□□ 0.94
SMARCD3-202ENST00000356800 PARP14Q460N5 1801 aa20.89■□□□□ 0.93
SMARCD3-202ENST00000356800 ZBTB5O15062 677 aa20.89■□□□□ 0.93
SMARCD3-202ENST00000356800 NCLP19338 710 aaKnown RBP20.89■□□□□ 0.93
SMARCD3-202ENST00000356800 BACE1P56817 501 aa20.89■□□□□ 0.93
SMARCD3-202ENST00000356800 NLRP5P59047 1200 aa20.89■□□□□ 0.93
SMARCD3-202ENST00000356800 MAP3K11Q16584 847 aa20.89■□□□□ 0.93
SMARCD3-202ENST00000356800 CSPP1Q1MSJ5 1256 aa20.89■□□□□ 0.93
SMARCD3-202ENST00000356800 LDHDQ86WU2 507 aa20.89■□□□□ 0.93
SMARCD3-202ENST00000356800 LPAR1Q92633 364 aa20.89■□□□□ 0.93
SMARCD3-202ENST00000356800 TRIM75PA6NK02 468 aa20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 KRT2P35908 639 aa20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 STAT2P52630 851 aa20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 IKQ13123 557 aaPredicted RBP20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 QRICH1Q2TAL8 776 aa20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 MYSM1Q5VVJ2 828 aa20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 ATL3Q6DD88 541 aa20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 NOSTRINQ8IVI9 506 aa20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 TNFRSF25Q93038 417 aa20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 FTOQ9C0B1 505 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 PRR12Q9ULL5 1215 aa20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 AFG3L2Q9Y4W6 797 aa20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 SMCHD1A6NHR9 2005 aa20.88■□□□□ 0.93
SMARCD3-202ENST00000356800 FIBPO43427 364 aa20.87■□□□□ 0.93
SMARCD3-202ENST00000356800 PLA2G6O60733 806 aa20.87■□□□□ 0.93
SMARCD3-202ENST00000356800 SNAP25P60880 206 aa20.87■□□□□ 0.93
SMARCD3-202ENST00000356800 GNL2Q13823 731 aaKnown RBP20.87■□□□□ 0.93
SMARCD3-202ENST00000356800 CDC37Q16543 378 aaPredicted RBP20.87■□□□□ 0.93
SMARCD3-202ENST00000356800 CNKSR2Q8WXI2 1034 aa20.87■□□□□ 0.93
SMARCD3-202ENST00000356800 COA7Q96BR5 231 aa20.87■□□□□ 0.93
SMARCD3-202ENST00000356800 CLMNQ96JQ2 1002 aa20.87■□□□□ 0.93
SMARCD3-202ENST00000356800 FBXO28Q9NVF7 368 aa20.87■□□□□ 0.93
SMARCD3-202ENST00000356800 CSADQ9Y600 493 aa20.87■□□□□ 0.93
SMARCD3-202ENST00000356800 WDR46O15213 610 aaKnown RBP20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 USP14P54578 494 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 NAPAP54920 295 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 TTLL12Q14166 644 aaPredicted RBP20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 KLHL40Q2TBA0 621 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 FAM177A1Q8N128 213 aaPredicted RBP20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 CCDC148Q8NFR7 591 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 USP28Q96RU2 1077 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 RLFQ13129 1914 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 hCG_1984214I3L0E3 225 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 VCAM1P19320 739 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 CALML3P27482 149 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 NOM1Q5C9Z4 860 aaKnown RBP20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 EARS2Q5JPH6 523 aaKnown RBP20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 ANKRD13AQ8IZ07 590 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 ZNF713Q8N859 430 aaPredicted RBP20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 CHURC1Q8WUH1 139 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 SCAND2PQ9GZW5 306 aaPredicted RBP20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 ZMYND12Q9H0C1 365 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 FEM1BQ9UK73 627 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 PCDHA4Q9UN74 947 aa20.86■□□□□ 0.93
SMARCD3-202ENST00000356800 FAM205CA6NFA0 338 aa20.85■□□□□ 0.93
SMARCD3-202ENST00000356800 M0R2N6 131 aa20.85■□□□□ 0.93
SMARCD3-202ENST00000356800 HMGCS2P54868 508 aa20.85■□□□□ 0.93
SMARCD3-202ENST00000356800 BLIDQ8IZY5 108 aa20.85■□□□□ 0.93
SMARCD3-202ENST00000356800 DAGLBQ8NCG7 672 aa20.85■□□□□ 0.93
SMARCD3-202ENST00000356800 C12orf42Q96LP6 360 aa20.85■□□□□ 0.93
SMARCD3-202ENST00000356800 ZNF396Q96N95 335 aaPredicted RBP20.85■□□□□ 0.93
SMARCD3-202ENST00000356800 ELP3Q9H9T3 547 aa20.85■□□□□ 0.93
SMARCD3-202ENST00000356800 CFAP45Q9UL16 551 aa20.85■□□□□ 0.93
SMARCD3-202ENST00000356800 DDX49Q9Y6V7 483 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 543.9 ms