RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TEKT3Q9BXF9 490 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 PRDM10Q9NQV6 1147 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 KIAA0232Q92628 1395 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 IFRD2Q12894 506 aaPredicted RBP6.09□□□□□ -1.43
PTPRD-202ENST00000356435 HADHQ16836 314 aaKnown RBP6.09□□□□□ -1.43
PTPRD-202ENST00000356435 VPS18Q9P253 973 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 SLC8A2Q9UPR5 921 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 ANXA13P27216 316 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 ZNF131P52739 623 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 CDR2Q01850 454 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 CEP57Q86XR8 500 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 GPATCH11Q8N954 259 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 TRIML1Q8N9V2 468 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 POMGNT1Q8WZA1 660 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 APPBP2Q92624 585 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 DDX41Q9UJV9 622 aaKnown RBP6.09□□□□□ -1.43
PTPRD-202ENST00000356435 LRRIQ1Q96JM4 1722 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 TMEM191BP0C7N4 346 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 ALAS1P13196 640 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 PDE6CP51160 858 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 RINT1Q6NUQ1 792 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 C4orf50Q6ZRC1 276 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 MRFAP1L1Q96HT8 127 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 TBC1D7Q9P0N9 293 aa6.09□□□□□ -1.43
PTPRD-202ENST00000356435 PRDM1O75626 825 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 HPDP32754 393 aaPredicted RBP6.09□□□□□ -1.44
PTPRD-202ENST00000356435 PPARAQ07869 468 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 MAPK8IP2Q13387 824 aaPredicted RBP6.09□□□□□ -1.44
PTPRD-202ENST00000356435 TSTA3Q13630 321 aaPredicted RBP6.09□□□□□ -1.44
PTPRD-202ENST00000356435 PPP2R5AQ15172 486 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 RPS6KA2Q15349 733 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 DIXDC1Q155Q3 683 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 PHLDB2Q86SQ0 1253 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.09□□□□□ -1.44
PTPRD-202ENST00000356435 KRT12Q99456 494 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 JPH2Q9BR39 696 aaPredicted RBP6.09□□□□□ -1.44
PTPRD-202ENST00000356435 GPAA1O43292 621 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 ICA1Q05084 483 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 JADE1Q6IE81 842 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 CABP7Q86V35 215 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 GPBP1Q86WP2 473 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 NME8Q8N427 588 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 RETREG2Q8NC44 543 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 ANAPC5Q9UJX4 755 aa6.09□□□□□ -1.44
PTPRD-202ENST00000356435 F8W8V4 182 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 CTDSPL2Q05D32 466 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 GCKRQ14397 625 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 RIC8AQ9NPQ8 531 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 VAMP4O75379 141 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 LMNB1P20700 586 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 POLGP54098 1239 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-202ENST00000356435 RNASELQ05823 741 aaKnown RBP6.08□□□□□ -1.44
PTPRD-202ENST00000356435 ARMC9Q7Z3E5 817 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 LMNTD2Q8IXW0 634 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 LMCD1Q9NZU5 365 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 TCP10L2B9ZVM9 353 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 TAF5LO75529 589 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 PDE6AP16499 860 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 KLHL30Q0D2K2 578 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 DNAJC21Q5F1R6 531 aaKnown RBP6.08□□□□□ -1.44
PTPRD-202ENST00000356435 XKR9Q5GH70 373 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 GBP6Q6ZN66 633 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 CHMP6Q96FZ7 201 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 CPSF1Q10570 1443 aaKnown RBP6.08□□□□□ -1.44
PTPRD-202ENST00000356435 EDC4Q6P2E9 1401 aaKnown RBP6.08□□□□□ -1.44
PTPRD-202ENST00000356435 A6NJR5 290 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 A6NNZ2 444 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 PPFIA4O75335 1185 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 TBC1D8O95759 1140 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 NFKBIAP25963 317 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 GARSP41250 739 aaKnown RBP6.08□□□□□ -1.44
PTPRD-202ENST00000356435 PSMD6Q15008 389 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 TUBB8Q3ZCM7 444 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 RAB44Q7Z6P3 723 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-202ENST00000356435 BAG5Q9UL15 447 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 WDR64B1ANS9 1081 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 GSTA1P08263 222 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 GSTA2P09210 222 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 KRT15P19012 456 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 ATP2B4P23634 1241 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 PPP2R3AQ06190 1150 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 TERF2Q15554 542 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 NELFBQ8WX92 580 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 PPEF1O14829 653 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-202ENST00000356435 ATP6V1E1P36543 226 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 PIK3CAP42336 1068 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 TMC4Q7Z404 712 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 AFAP1L1Q8TED9 768 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 ZNF215Q9UL58 517 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-202ENST00000356435 ABT1Q9ULW3 272 aaKnown RBP6.08□□□□□ -1.44
PTPRD-202ENST00000356435 CFAP74Q9C0B2 1584 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 PBRM1Q86U86 1689 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 KCNA6P17658 529 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 RUFY4Q6ZNE9 571 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 B4GALNT4Q76KP1 1039 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 PEX26Q7Z412 305 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 CCDC84Q86UT8 332 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-202ENST00000356435 EYA1Q99502 592 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 NUB1Q9Y5A7 615 aa6.08□□□□□ -1.44
PTPRD-202ENST00000356435 SPDYE2BA6NHP3 402 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms