RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 FGAP02671 866 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 FGRP09769 529 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 JAG1P78504 1218 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 ICA1Q05084 483 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 PABPC4Q13310 644 aaKnown RBP eCLIP4.7□□□□□ -1.66
CNOT4-202ENST00000356162 SEPT2Q15019 361 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 TMEM132AQ24JP5 1023 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 SHROOM1Q2M3G4 852 aaPredicted RBP4.7□□□□□ -1.66
CNOT4-202ENST00000356162 BRICD5Q6PL45 260 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 GADL1Q6ZQY3 521 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 CCDC84Q86UT8 332 aaPredicted RBP4.7□□□□□ -1.66
CNOT4-202ENST00000356162 FAM160A2Q8N612 972 aaPredicted RBP4.7□□□□□ -1.66
CNOT4-202ENST00000356162 PARK7Q99497 189 aaKnown RBP4.7□□□□□ -1.66
CNOT4-202ENST00000356162 FEZ1Q99689 392 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 REPIN1Q9BWE0 567 aaKnown RBP4.7□□□□□ -1.66
CNOT4-202ENST00000356162 KIAA1683Q9H0B3 1180 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 IL25Q9H293 177 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 MKNK2Q9HBH9 465 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 ARHGEF10LQ9HCE6 1279 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 PRDM10Q9NQV6 1147 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 TMOD4Q9NZQ9 345 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 SYNPO2Q9UMS6 1093 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 AGTPBP1Q9UPW5 1226 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 ADGRA2Q96PE1 1338 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 TRIM75PA6NK02 468 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 USP17L10C9JJH3 530 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 SMIM22K7EJ46 135 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 BACE1P56817 501 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 CTDSPL2Q05D32 466 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 SPP2Q13103 211 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 MTMR2Q13614 643 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 RAB3GAP1Q15042 981 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 TAF1CQ15572 869 aaPredicted RBP4.7□□□□□ -1.66
CNOT4-202ENST00000356162 IMMTQ16891 758 aaKnown RBP4.7□□□□□ -1.66
CNOT4-202ENST00000356162 PLA2G2CQ5R387 149 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 GPAT2Q6NUI2 795 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 RNF19BQ6ZMZ0 732 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 TBC1D10CQ8IV04 446 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 FAM43AQ8N2R8 423 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 NEDD1Q8NHV4 660 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 GTF3C2Q8WUA4 911 aaPredicted RBP4.7□□□□□ -1.66
CNOT4-202ENST00000356162 PTPN18Q99952 460 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 KANSL2Q9H9L4 492 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 ZFYVE28Q9HCC9 887 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 NYAP2Q9P242 653 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 MGAMO43451 1857 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 NRG2O14511 850 aaPredicted RBP4.69□□□□□ -1.66
CNOT4-202ENST00000356162 HMGCS2P54868 508 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 USP46P62068 366 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 AMHR2Q16671 573 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 AKNAD1Q5T1N1 836 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 LIAT1Q6ZQX7 453 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 KIAA1211Q6ZU35 1233 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 ZNF444Q8N0Y2 327 aaPredicted RBP4.69□□□□□ -1.66
CNOT4-202ENST00000356162 LSG1Q9H089 658 aaKnown RBP4.69□□□□□ -1.66
CNOT4-202ENST00000356162 NEDD4P46934 1319 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 RLFQ13129 1914 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 PDHXO00330 501 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 ZNF213O14771 459 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 WDR46O15213 610 aaKnown RBP4.69□□□□□ -1.66
CNOT4-202ENST00000356162 TRPA1O75762 1119 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 TSPY3P0CV98 308 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 TSPY8P0CW00 308 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 HAND2P61296 217 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 PTH1RQ03431 593 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 CRHR2Q13324 411 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 CCDC178Q5BJE1 867 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 MFSD6Q6ZSS7 791 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 ACER1Q8TDN7 264 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 LPAR1Q92633 364 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.69□□□□□ -1.66
CNOT4-202ENST00000356162 VCPKMTQ9H867 229 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 CNNM2Q9H8M5 875 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 GOPCQ9HD26 462 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 TCP11L1Q9NUJ3 509 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 TMX2Q9Y320 296 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 TACC3Q9Y6A5 838 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 ZNF236Q9UL36 1845 aa4.69□□□□□ -1.66
CNOT4-202ENST00000356162 TSPY2A6NKD2 308 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 GPR25O00155 361 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 HOXA2O43364 376 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 EPB41L2O43491 1005 aaKnown RBP4.68□□□□□ -1.66
CNOT4-202ENST00000356162 FKTNO75072 461 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 PRDM1O75626 825 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 TTLL1O95922 423 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 EEF2P13639 858 aaKnown RBP4.68□□□□□ -1.66
CNOT4-202ENST00000356162 HOXA7P31268 230 aaPredicted RBP4.68□□□□□ -1.66
CNOT4-202ENST00000356162 NOVP48745 357 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 Q3C1V9 767 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 MSS51Q4VC12 460 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 TREML2Q5T2D2 321 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 Q6ZNB5 142 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 CLEC10AQ8IUN9 316 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 STK11IPQ8N1F8 1099 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 ESR2Q92731 530 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 MAP4K1Q92918 833 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 KRT23Q9C075 422 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 RBM8AQ9Y5S9 174 aaKnown RBP4.68□□□□□ -1.66
CNOT4-202ENST00000356162 ZSWIM8A7E2V4 1837 aa4.68□□□□□ -1.66
CNOT4-202ENST00000356162 MYPNQ86TC9 1320 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms