RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 APBA1Q02410 837 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 CKAP4Q07065 602 aaKnown RBP15.22■□□□□ 0.03
TRIM4-203ENST00000355947 SPAG1Q07617 926 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 CEP57Q86XR8 500 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 ESR2Q92731 530 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 SECISBP2LQ93073 1101 aaKnown RBP15.22■□□□□ 0.03
TRIM4-203ENST00000355947 ARL8AQ96BM9 186 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 JPH2Q9BR39 696 aaPredicted RBP15.22■□□□□ 0.03
TRIM4-203ENST00000355947 NLRC4Q9NPP4 1024 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 CRYBG1Q9Y4K1 1723 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 ABCC6O95255 1503 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 ZSCAN5CA6NGD5 496 aaPredicted RBP15.22■□□□□ 0.03
TRIM4-203ENST00000355947 HSF2BPO75031 334 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 ATF3P18847 181 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 IRAK1P51617 712 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 ODF2Q5BJF6 829 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 IQCA1Q86XH1 822 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 MS4A14Q96JA4 679 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 NOC4LQ9BVI4 516 aaKnown RBP15.22■□□□□ 0.03
TRIM4-203ENST00000355947 CPVLQ9H3G5 476 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 HAUS4Q9H6D7 363 aa15.22■□□□□ 0.03
TRIM4-203ENST00000355947 SLIT1O75093 1534 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 SLC5A1P13866 664 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 USP5P45974 858 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 HERVK_113P62684 666 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRIM4-203ENST00000355947 KANSL2Q9H9L4 492 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 NHEJ1Q9H9Q4 299 aaPredicted RBP15.21■□□□□ 0.03
TRIM4-203ENST00000355947 PPANQ9NQ55 473 aaKnown RBP15.21■□□□□ 0.03
TRIM4-203ENST00000355947 LAMA4Q16363 1823 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 NALCNQ8IZF0 1738 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 WTIPA6NIX2 430 aaPredicted RBP15.21■□□□□ 0.03
TRIM4-203ENST00000355947 LIFRP42702 1097 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 KRT83P78385 493 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 UBE3CQ15386 1083 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 CDKAL1Q5VV42 579 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 SGMS1Q86VZ5 419 aa15.21■□□□□ 0.03
TRIM4-203ENST00000355947 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.02
TRIM4-203ENST00000355947 PSMA7O14818 248 aa15.21■□□□□ 0.02
TRIM4-203ENST00000355947 ADAMTS3O15072 1205 aa15.21■□□□□ 0.02
TRIM4-203ENST00000355947 GUCY1A3Q02108 690 aa15.21■□□□□ 0.02
TRIM4-203ENST00000355947 KLHL7Q8IXQ5 586 aa15.21■□□□□ 0.02
TRIM4-203ENST00000355947 IFIH1Q9BYX4 1025 aaKnown RBP15.21■□□□□ 0.02
TRIM4-203ENST00000355947 AATFQ9NY61 560 aaKnown RBP eCLIP15.21■□□□□ 0.02
TRIM4-203ENST00000355947 PACSIN2Q9UNF0 486 aaPredicted RBP15.21■□□□□ 0.02
TRIM4-203ENST00000355947 CCDC194A0A1B0GVG4 234 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 PAFAH1B1P43034 410 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 CACNA2D4Q7Z3S7 1137 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 EFCAB13Q8IY85 973 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 TUBGCP2Q9BSJ2 902 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 ZHX3Q9H4I2 956 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 CDHR2Q9BYE9 1310 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 C8orf74Q6P047 294 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 BICDL1Q6ZP65 573 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 DYMQ7RTS9 669 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 MB21D1Q8N884 522 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 CCDC51Q96ER9 411 aa15.2■□□□□ 0.02
TRIM4-203ENST00000355947 A0A087WUV0 522 aaPredicted RBP15.19■□□□□ 0.02
TRIM4-203ENST00000355947 RDXP35241 583 aaKnown RBP15.19■□□□□ 0.02
TRIM4-203ENST00000355947 GYG1P46976 350 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 SEC24CP53992 1094 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 PDE4DQ08499 809 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 HEATR3Q7Z4Q2 680 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 KAT2BQ92831 832 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 CCDC43Q96MW1 224 aaKnown RBP15.19■□□□□ 0.02
TRIM4-203ENST00000355947 RIPOR2Q9Y4F9 1068 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 USO1O60763 962 aaKnown RBP15.19■□□□□ 0.02
TRIM4-203ENST00000355947 TACC1O75410 805 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 CTSWP56202 376 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 RRAGAQ7L523 313 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 SLC39A2Q9NP94 309 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 TSPY2A6NKD2 308 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 MCM3P25205 808 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 INF2Q27J81 1249 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 TRAPPC11Q7Z392 1133 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 RNF41Q9H4P4 317 aaPredicted RBP15.19■□□□□ 0.02
TRIM4-203ENST00000355947 NFU1Q9UMS0 254 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 CAPN6Q9Y6Q1 641 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 MEGF6O75095 1541 aa15.19■□□□□ 0.02
TRIM4-203ENST00000355947 UQCRFS1P1P0C7P4 283 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 GUCY2DQ02846 1103 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 ACTN3Q08043 901 aaPredicted RBP15.18■□□□□ 0.02
TRIM4-203ENST00000355947 CFAP58Q5T655 872 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 MMS22LQ6ZRQ5 1243 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 CCDC24Q8N4L8 307 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 ENAHQ8N8S7 591 aaPredicted RBP15.18■□□□□ 0.02
TRIM4-203ENST00000355947 ZBTB38Q8NAP3 1195 aaPredicted RBP15.18■□□□□ 0.02
TRIM4-203ENST00000355947 USP17L12C9JPN9 530 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 USP17L21D6R901 530 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 RAD21O60216 631 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 FTCDO95954 541 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 PDE6BP35913 854 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 RASSF7Q02833 373 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 IFT88Q13099 833 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 CCNI2Q6ZMN8 369 aaPredicted RBP15.18■□□□□ 0.02
TRIM4-203ENST00000355947 DNAAF5Q86Y56 855 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 SHISA4Q96DD7 197 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 FAM212AQ96EL1 285 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 MAGEB6P1A0A0J9YX57 407 aa15.18■□□□□ 0.02
TRIM4-203ENST00000355947 GUCY2CP25092 1073 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms