RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 EPB41L4AQ9HCS5 686 aaPredicted RBP15.68■□□□□ 0.1
SREBF1-202ENST00000355815 CPSF2Q9P2I0 782 aaKnown RBP15.68■□□□□ 0.1
SREBF1-202ENST00000355815 E7EVH7 732 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 MECOMQ03112 1051 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 RBM28Q9NW13 759 aaKnown RBP15.68■□□□□ 0.1
SREBF1-202ENST00000355815 TNS3Q68CZ2 1445 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 LOC102724159A0A0B4J2E5 919 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 BUB1BO60566 1050 aaPredicted RBP15.68■□□□□ 0.1
SREBF1-202ENST00000355815 HMGB2P26583 209 aaKnown RBP15.68■□□□□ 0.1
SREBF1-202ENST00000355815 KRT83P78385 493 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 PWP2Q15269 919 aaKnown RBP15.68■□□□□ 0.1
SREBF1-202ENST00000355815 ANKRD2Q9GZV1 360 aa15.68■□□□□ 0.1
SREBF1-202ENST00000355815 ENC1O14682 589 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 PARP1P09874 1014 aaKnown RBP15.67■□□□□ 0.1
SREBF1-202ENST00000355815 KIAA0753Q2KHM9 967 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 RPAINQ86UA6 219 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 LRRC47Q8N1G4 583 aaKnown RBP15.67■□□□□ 0.1
SREBF1-202ENST00000355815 CSGALNACT2Q8N6G5 542 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 SPTLC3Q9NUV7 552 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 SCG2P13521 617 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 TECP42680 631 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 MFSD14BQ5SR56 506 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 RRP36Q96EU6 259 aaKnown RBP15.67■□□□□ 0.1
SREBF1-202ENST00000355815 PARD6BQ9BYG5 372 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 C6orf50Q9HD87 102 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 GNAQP50148 359 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 GUCY2FP51841 1108 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 SPAG1Q07617 926 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 PAK1Q13153 545 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 VPS36Q86VN1 386 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 ANKS4BQ8N8V4 417 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 IGDCC4Q8TDY8 1250 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 ADAM21Q9UKJ8 722 aa15.67■□□□□ 0.1
SREBF1-202ENST00000355815 CASP14P31944 242 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 LIFRP42702 1097 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 CEP85LQ5SZL2 805 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 C8orf74Q6P047 294 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 ENAHQ8N8S7 591 aaPredicted RBP15.66■□□□□ 0.1
SREBF1-202ENST00000355815 RMND1Q9NWS8 449 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 DLG5Q8TDM6 1919 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 ZNF804BA4D1E1 1349 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 TRIM28Q13263 835 aaKnown RBP15.66■□□□□ 0.1
SREBF1-202ENST00000355815 TBC1D31Q96DN5 1066 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 KLRF2D3W0D1 207 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 PPP6R2O75170 966 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 CSF1RP07333 972 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 KRT13P13646 458 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 MRPS25P82663 173 aaKnown RBP15.66■□□□□ 0.1
SREBF1-202ENST00000355815 ARFGAP2Q8N6H7 521 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 IRX2Q9BZI1 471 aaPredicted RBP15.66■□□□□ 0.1
SREBF1-202ENST00000355815 MINPP1Q9UNW1 487 aa15.66■□□□□ 0.1
SREBF1-202ENST00000355815 SOWAHDA6NJG2 315 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 TOM1O60784 492 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 DOK7Q18PE1 504 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 USP17L2Q6R6M4 530 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 ALDH8A1Q9H2A2 487 aaPredicted RBP15.65■□□□□ 0.1
SREBF1-202ENST00000355815 KCNK9Q9NPC2 374 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 GSTO1P78417 241 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 ST5P78524 1137 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 ARMCX5Q6P1M9 558 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 TEX2Q8IWB9 1127 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 KLHL7Q8IXQ5 586 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 BLIDQ8IZY5 108 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 TSG101Q99816 390 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 RAB34Q9BZG1 259 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 ERVV-1B6SEH8 477 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 PCK1P35558 622 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 AMPD3Q01432 767 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 ZNF710Q8N1W2 664 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 PALLDQ8WX93 1383 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 MROH7-TTC4A0A0A0MT08 1334 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 SMCO2A6NFE2 343 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 PP2D1A8MPX8 630 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 BRD3Q15059 726 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 ICE2Q659A1 982 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 EYA3Q99504 573 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 FAM207AQ9NSI2 230 aaPredicted RBP15.65■□□□□ 0.1
SREBF1-202ENST00000355815 TMEM51Q9NW97 253 aa15.65■□□□□ 0.1
SREBF1-202ENST00000355815 TEX33O43247 280 aa15.64■□□□□ 0.09
SREBF1-202ENST00000355815 TBC1D9BQ66K14 1250 aa15.64■□□□□ 0.09
SREBF1-202ENST00000355815 FAM196AQ6ZSG2 479 aa15.64■□□□□ 0.09
SREBF1-202ENST00000355815 A0A1W2PRG0 241 aa15.64■□□□□ 0.09
SREBF1-202ENST00000355815 TUBBP07437 444 aa15.64■□□□□ 0.09
SREBF1-202ENST00000355815 METTL16Q86W50 562 aaKnown RBP15.64■□□□□ 0.09
SREBF1-202ENST00000355815 NELFCDQ8IXH7 590 aa15.64■□□□□ 0.09
SREBF1-202ENST00000355815 ANKRD13CQ8N6S4 541 aa15.64■□□□□ 0.09
SREBF1-202ENST00000355815 ENGASEQ8NFI3 743 aa15.64■□□□□ 0.09
SREBF1-202ENST00000355815 KLRK1P26718 216 aa15.64■□□□□ 0.09
SREBF1-202ENST00000355815 ZYXQ15942 572 aaKnown RBP15.64■□□□□ 0.09
SREBF1-202ENST00000355815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.64■□□□□ 0.09
SREBF1-202ENST00000355815 NOC4LQ9BVI4 516 aaKnown RBP15.64■□□□□ 0.09
SREBF1-202ENST00000355815 FOXP1Q9H334 677 aaPredicted RBP15.64■□□□□ 0.09
SREBF1-202ENST00000355815 GDAQ9Y2T3 454 aa15.64■□□□□ 0.09
SREBF1-202ENST00000355815 CCDC172P0C7W6 258 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 RBL2Q08999 1139 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 PLS1Q14651 629 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 FCHSD1Q86WN1 690 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 CEP83Q9Y592 693 aa15.63■□□□□ 0.09
SREBF1-202ENST00000355815 TCHHQ07283 1943 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms