RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ZNF790Q6PG37 636 aa11□□□□□ -0.65
COL11A1-201ENST00000353414 VSIG1Q86XK7 387 aa11□□□□□ -0.65
COL11A1-201ENST00000353414 GDAP1Q8TB36 358 aa11□□□□□ -0.65
COL11A1-201ENST00000353414 PI4K2BQ8TCG2 481 aa11□□□□□ -0.65
COL11A1-201ENST00000353414 NAPGQ99747 312 aaPredicted RBP11□□□□□ -0.65
COL11A1-201ENST00000353414 CCPG1Q9ULG6 757 aa11□□□□□ -0.65
COL11A1-201ENST00000353414 RIMS2Q9UQ26 1411 aa11□□□□□ -0.65
COL11A1-201ENST00000353414 DYNLT1P63172 113 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 SNX1Q13596 522 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 MUM1L1Q5H9M0 696 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 ANO1Q5XXA6 986 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 PDCD7Q8N8D1 485 aaKnown RBP10.99□□□□□ -0.65
COL11A1-201ENST00000353414 FTOQ9C0B1 505 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL11A1-201ENST00000353414 ACTN4O43707 911 aaKnown RBP10.99□□□□□ -0.65
COL11A1-201ENST00000353414 RAD17O75943 681 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 GBP1P32455 592 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 PSPC1Q8WXF1 523 aaKnown RBP10.99□□□□□ -0.65
COL11A1-201ENST00000353414 TEKT1Q969V4 418 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 ANGPTL3Q9Y5C1 460 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 DHX29Q7Z478 1369 aaKnown RBP10.99□□□□□ -0.65
COL11A1-201ENST00000353414 ABCC1P33527 1531 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 TRAPPC10P48553 1259 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 NLRP7Q8WX94 980 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 FRMD3A2A2Y4 597 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 ALDH1L1O75891 902 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 ZNF853P0CG23 659 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 ATICP31939 592 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 AS3MTQ9HBK9 375 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 CACNB1Q02641 598 aaPredicted RBP10.99□□□□□ -0.65
COL11A1-201ENST00000353414 SFMBT2Q5VUG0 894 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 HDXQ7Z353 690 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 GABPB2Q8TAK5 448 aaPredicted RBP10.99□□□□□ -0.65
COL11A1-201ENST00000353414 AFAP1L1Q8TED9 768 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 CARD6Q9BX69 1037 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 DPH5Q9H2P9 285 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 VCX3BQ9H321 246 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 PANK4Q9NVE7 773 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 NUB1Q9Y5A7 615 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 MMEL1Q495T6 779 aa10.99□□□□□ -0.65
COL11A1-201ENST00000353414 RSRC2Q7L4I2 434 aaKnown RBP10.99□□□□□ -0.65
COL11A1-201ENST00000353414 SECISBP2LQ93073 1101 aaKnown RBP10.99□□□□□ -0.65
COL11A1-201ENST00000353414 SH3TC1Q8TE82 1336 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 GDF11O95390 407 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 INPP1P49441 399 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 MYL5Q02045 173 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 SMAD1Q15797 465 aaKnown RBP10.98□□□□□ -0.65
COL11A1-201ENST00000353414 KLHL40Q2TBA0 621 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 DENND2CQ68D51 928 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 CNGA4Q8IV77 575 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 LINS1Q8NG48 757 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 EXT2Q93063 718 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 SUCLG2Q96I99 432 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 GPR101Q96P66 508 aaPredicted RBP10.98□□□□□ -0.65
COL11A1-201ENST00000353414 HELLSQ9NRZ9 838 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 CTTNBP2Q8WZ74 1663 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 CHMLP26374 656 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 ADCY8P40145 1251 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 SLC9C1Q4G0N8 1177 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 ANGPTL8Q6UXH0 198 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 BRAPQ7Z569 592 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 DIS3L2Q8IYB7 885 aaKnown RBP10.98□□□□□ -0.65
COL11A1-201ENST00000353414 SUPT20HQ8NEM7 779 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 CCDC68Q9H2F9 335 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 H7C0C1 242 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 ATP5OP48047 213 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 PNMA8AQ86V59 439 aaPredicted RBP10.98□□□□□ -0.65
COL11A1-201ENST00000353414 PPM1KQ8N3J5 372 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 ATP6V1E2Q96A05 226 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 HOOK2Q96ED9 719 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 ADPGKQ9BRR6 497 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 PCIF1Q9H4Z3 704 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 RAB20Q9NX57 234 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 PCDHB4Q9Y5E5 795 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 KDM5BQ9UGL1 1544 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 NVLO15381 856 aaKnown RBP10.98□□□□□ -0.65
COL11A1-201ENST00000353414 TLR3O15455 904 aaKnown RBP10.98□□□□□ -0.65
COL11A1-201ENST00000353414 NONOQ15233 471 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL11A1-201ENST00000353414 PSTPIP2Q9H939 334 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 C14orf93Q9H972 538 aaKnown RBP10.98□□□□□ -0.65
COL11A1-201ENST00000353414 SLAIN2Q9P270 581 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 G3BP2Q9UN86 482 aaKnown RBP10.98□□□□□ -0.65
COL11A1-201ENST00000353414 WDR62O43379 1518 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 MYL3P08590 195 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 KCNA6P17658 529 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 ZBTB8OSQ8IWT0 167 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 FAM8A1Q9UBU6 413 aa10.98□□□□□ -0.65
COL11A1-201ENST00000353414 PDE6AP16499 860 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 PDE6BP35913 854 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL11A1-201ENST00000353414 SCARA5Q6ZMJ2 495 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 DDX25Q9UHL0 483 aaKnown RBP10.97□□□□□ -0.65
COL11A1-201ENST00000353414 SCAF11Q99590 1463 aaKnown RBP10.97□□□□□ -0.65
COL11A1-201ENST00000353414 KCNK3O14649 394 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 SLC16A2P36021 539 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 RBM46Q8TBY0 533 aaKnown RBP10.97□□□□□ -0.65
COL11A1-201ENST00000353414 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL11A1-201ENST00000353414 KDM6BO15054 1643 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 DMP1Q13316 513 aaPredicted RBP10.97□□□□□ -0.65
COL11A1-201ENST00000353414 PLBD2Q8NHP8 589 aa10.97□□□□□ -0.65
COL11A1-201ENST00000353414 AP5M1Q9H0R1 490 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms