RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 PUM3Q15397 648 aaKnown RBP16.73■□□□□ 0.27
TRAF3-202ENST00000351691 EMBQ6PCB8 327 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 ZNF34Q8IZ26 560 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 FNBP4Q8N3X1 1017 aaPredicted RBP16.73■□□□□ 0.27
TRAF3-202ENST00000351691 OR8K1Q8NGG5 319 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 CAVIN3Q969G5 261 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 DNAJC7Q99615 494 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 PIH1D3Q9NQM4 214 aaKnown RBP16.73■□□□□ 0.27
TRAF3-202ENST00000351691 H0YHG0 523 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 KRT86O43790 486 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 RANBP6O60518 1105 aaKnown RBP16.72■□□□□ 0.27
TRAF3-202ENST00000351691 PI16Q6UXB8 463 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 C1orf131Q8NDD1 294 aaKnown RBP16.72■□□□□ 0.27
TRAF3-202ENST00000351691 PHKBQ93100 1093 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 ZKSCAN4Q969J2 545 aaPredicted RBP16.72■□□□□ 0.27
TRAF3-202ENST00000351691 HDAC6Q9UBN7 1215 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 RWDD2AQ9UIY3 292 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 MYCNP04198 464 aaPredicted RBP16.72■□□□□ 0.27
TRAF3-202ENST00000351691 PDE6AP16499 860 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 ELF1P32519 619 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 TDO2P48775 406 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 EPHB4P54760 987 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 SKIDA1Q1XH10 827 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 SYNE4Q8N205 404 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 MAGEC3Q8TD91 643 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 PAGE5Q96GU1 130 aa16.72■□□□□ 0.27
TRAF3-202ENST00000351691 JPH2Q9BR39 696 aaPredicted RBP16.72■□□□□ 0.27
TRAF3-202ENST00000351691 FAM217BQ9NTX9 383 aaPredicted RBP16.72■□□□□ 0.27
TRAF3-202ENST00000351691 TCRBV5S4A2TA0A5A2 114 aa16.71■□□□□ 0.27
TRAF3-202ENST00000351691 RNF225M0QZC1 329 aaPredicted RBP16.71■□□□□ 0.27
TRAF3-202ENST00000351691 SLC5A1P13866 664 aa16.71■□□□□ 0.27
TRAF3-202ENST00000351691 PRLRP16471 622 aa16.71■□□□□ 0.27
TRAF3-202ENST00000351691 IFNAR1P17181 557 aa16.71■□□□□ 0.27
TRAF3-202ENST00000351691 STX17P56962 302 aa16.71■□□□□ 0.27
TRAF3-202ENST00000351691 HERVK_113P62684 666 aa16.71■□□□□ 0.27
TRAF3-202ENST00000351691 CCDC122Q5T0U0 273 aa16.71■□□□□ 0.27
TRAF3-202ENST00000351691 PURBQ96QR8 312 aaKnown RBP16.71■□□□□ 0.27
TRAF3-202ENST00000351691 EHD4Q9H223 541 aa16.71■□□□□ 0.27
TRAF3-202ENST00000351691 VCPKMTQ9H867 229 aa16.71■□□□□ 0.27
TRAF3-202ENST00000351691 ZNF532Q9HCE3 1301 aa16.71■□□□□ 0.27
TRAF3-202ENST00000351691 DOCK2Q92608 1830 aa16.71■□□□□ 0.26
TRAF3-202ENST00000351691 DOT1LQ8TEK3 1739 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 GOLGA8AA7E2F4 631 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 ACTN3Q08043 901 aaPredicted RBP16.7■□□□□ 0.26
TRAF3-202ENST00000351691 KLHL10Q6JEL2 608 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 KDM7AQ6ZMT4 941 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 SND1Q7KZF4 910 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRAF3-202ENST00000351691 DZIP3Q86Y13 1208 aaKnown RBP16.7■□□□□ 0.26
TRAF3-202ENST00000351691 CAGE1Q8TC20 777 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 SLC4A9Q96Q91 983 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 STRBPQ96SI9 672 aaKnown RBP16.7■□□□□ 0.26
TRAF3-202ENST00000351691 CHP1Q99653 195 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 CSRNP2Q9H175 543 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 EPN3Q9H201 632 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 ZBTB1Q9Y2K1 713 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 A0A1W2PQC6 194 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 CCDC189A1A4V9 331 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 BTBD18B2RXH4 712 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 MYO1FO00160 1098 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 ENC1O14682 589 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 HSF2BPO75031 334 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 IDH1O75874 414 aaKnown RBP16.7■□□□□ 0.26
TRAF3-202ENST00000351691 RASSF9O75901 435 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 LIFRP42702 1097 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 NAP1L1P55209 391 aaKnown RBP16.7■□□□□ 0.26
TRAF3-202ENST00000351691 TCP11X2Q5H9J9 407 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 CYB5R4Q7L1T6 521 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 TBC1D10CQ8IV04 446 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 CCDC50Q8IVM0 306 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 DIS3L2Q8IYB7 885 aaKnown RBP16.7■□□□□ 0.26
TRAF3-202ENST00000351691 TRIM10Q9UDY6 481 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 SAMM50Q9Y512 469 aa16.7■□□□□ 0.26
TRAF3-202ENST00000351691 PATL2C9JE40 543 aaKnown RBP16.69■□□□□ 0.26
TRAF3-202ENST00000351691 CCT6AP40227 531 aaKnown RBP16.69■□□□□ 0.26
TRAF3-202ENST00000351691 PHKA1P46020 1223 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 MRPL12P52815 198 aaKnown RBP16.69■□□□□ 0.26
TRAF3-202ENST00000351691 MEA1Q16626 185 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 IGDCC4Q8TDY8 1250 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 MIEF2Q96C03 454 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 C8orf37Q96NL8 207 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 RUFY1Q96T51 708 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 MTA3Q9BTC8 594 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 KLC4Q9NSK0 619 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 CAPN11Q9UMQ6 739 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 TIAM2Q8IVF5 1701 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 SLIT2O94813 1529 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 SRGAP2O75044 1071 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 ERCC3P19447 782 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 CYLC1P35663 651 aaPredicted RBP16.69■□□□□ 0.26
TRAF3-202ENST00000351691 MAP3K12Q12852 859 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 TSR1Q2NL82 804 aaKnown RBP16.69■□□□□ 0.26
TRAF3-202ENST00000351691 TTMPQ5BVD1 217 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.69■□□□□ 0.26
TRAF3-202ENST00000351691 GSPT2Q8IYD1 628 aaKnown RBP16.69■□□□□ 0.26
TRAF3-202ENST00000351691 CCDC170Q8IYT3 715 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 AIDAQ96BJ3 306 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 CNNM2Q9H8M5 875 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 VEZTQ9HBM0 779 aa16.69■□□□□ 0.26
TRAF3-202ENST00000351691 PDE2AO00408 941 aaPredicted RBP16.68■□□□□ 0.26
TRAF3-202ENST00000351691 ZMYND10O75800 440 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms