RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PAGE5Q96GU1 130 aa18.99■□□□□ 0.63
SAMM50-201ENST00000350028 HSD3B7Q9H2F3 369 aa18.99■□□□□ 0.63
SAMM50-201ENST00000350028 RIOX1Q9H6W3 641 aa18.99■□□□□ 0.63
SAMM50-201ENST00000350028 DBNDD1Q9H9R9 158 aa18.99■□□□□ 0.63
SAMM50-201ENST00000350028 C6orf50Q9HD87 102 aa18.99■□□□□ 0.63
SAMM50-201ENST00000350028 AKR1B1P15121 316 aa18.98■□□□□ 0.63
SAMM50-201ENST00000350028 GNA11P29992 359 aa18.98■□□□□ 0.63
SAMM50-201ENST00000350028 NAPAP54920 295 aa18.98■□□□□ 0.63
SAMM50-201ENST00000350028 SOGA3Q5TF21 947 aa18.98■□□□□ 0.63
SAMM50-201ENST00000350028 KRT25Q7Z3Z0 450 aa18.98■□□□□ 0.63
SAMM50-201ENST00000350028 GRAMD1CQ8IYS0 662 aa18.98■□□□□ 0.63
SAMM50-201ENST00000350028 IQUBQ8NA54 791 aa18.98■□□□□ 0.63
SAMM50-201ENST00000350028 EHD4Q9H223 541 aa18.98■□□□□ 0.63
SAMM50-201ENST00000350028 USP17L5A8MUK1 530 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 LAD1O00515 517 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 PDHBP11177 359 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 CC2D2BQ6DHV5 1058 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 FILIP1Q7Z7B0 1213 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 ENOX1Q8TC92 643 aaKnown RBP18.97■□□□□ 0.63
SAMM50-201ENST00000350028 RASGRP4Q8TDF6 673 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 CCDC17Q96LX7 622 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 SLX4Q8IY92 1834 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 ESYT2A0FGR8 921 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 TTLL1O95922 423 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 SNHG28P0DPA3 235 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 ERCC5P28715 1186 aaPredicted RBP18.97■□□□□ 0.63
SAMM50-201ENST00000350028 IL17AQ16552 155 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 DACT2Q5SW24 774 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 GSDMAQ96QA5 445 aa18.97■□□□□ 0.63
SAMM50-201ENST00000350028 SMCO2A6NFE2 343 aa18.96■□□□□ 0.63
SAMM50-201ENST00000350028 ECE2O60344 883 aa18.96■□□□□ 0.63
SAMM50-201ENST00000350028 SHMT1P34896 483 aa18.96■□□□□ 0.63
SAMM50-201ENST00000350028 TXLNAP40222 546 aa18.96■□□□□ 0.63
SAMM50-201ENST00000350028 DPYDQ12882 1025 aa18.96■□□□□ 0.63
SAMM50-201ENST00000350028 R3HDM1Q15032 1099 aaKnown RBP18.96■□□□□ 0.63
SAMM50-201ENST00000350028 E2F4Q16254 413 aa18.96■□□□□ 0.63
SAMM50-201ENST00000350028 DHX36Q9H2U1 1008 aaKnown RBP18.96■□□□□ 0.63
SAMM50-201ENST00000350028 FANCLQ9NW38 375 aa18.96■□□□□ 0.63
SAMM50-201ENST00000350028 ADAMTSL1Q8N6G6 1762 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 NPM3O75607 178 aaKnown RBP18.95■□□□□ 0.62
SAMM50-201ENST00000350028 SERPINC1P01008 464 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 PRPHP41219 470 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 AFMP43652 599 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 UBASH3AP57075 661 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 INF2Q27J81 1249 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 DTHD1Q6ZMT9 781 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 RASGRP2Q7LDG7 609 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 HOMER1Q86YM7 354 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 CCDC150Q8NCX0 1101 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 SUPT20HQ8NEM7 779 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 PIGSQ96S52 555 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 CPVLQ9H3G5 476 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 VAT1LQ9HCJ6 419 aa18.95■□□□□ 0.62
SAMM50-201ENST00000350028 GOLGB1Q14789 3259 aaKnown RBP18.95■□□□□ 0.62
SAMM50-201ENST00000350028 ATP1A3P13637 1013 aa18.94■□□□□ 0.62
SAMM50-201ENST00000350028 NONOQ15233 471 aaKnown RBP eCLIP18.94■□□□□ 0.62
SAMM50-201ENST00000350028 TMC6Q7Z403 805 aa18.94■□□□□ 0.62
SAMM50-201ENST00000350028 C7orf43Q8WVR3 580 aa18.94■□□□□ 0.62
SAMM50-201ENST00000350028 PRIMPOLQ96LW4 560 aa18.94■□□□□ 0.62
SAMM50-201ENST00000350028 IDI2Q9BXS1 227 aa18.94■□□□□ 0.62
SAMM50-201ENST00000350028 UBA5Q9GZZ9 404 aa18.94■□□□□ 0.62
SAMM50-201ENST00000350028 KCNQ5Q9NR82 932 aa18.94■□□□□ 0.62
SAMM50-201ENST00000350028 ORC2Q13416 577 aaPredicted RBP18.94■□□□□ 0.62
SAMM50-201ENST00000350028 KIAA0825Q8IV33 1275 aa18.94■□□□□ 0.62
SAMM50-201ENST00000350028 LRRC47Q8N1G4 583 aaKnown RBP18.94■□□□□ 0.62
SAMM50-201ENST00000350028 GREB1LQ9C091 1923 aaPredicted RBP18.93■□□□□ 0.62
SAMM50-201ENST00000350028 GTPBP6O43824 516 aaPredicted RBP18.93■□□□□ 0.62
SAMM50-201ENST00000350028 CHRNA5P30532 468 aa18.93■□□□□ 0.62
SAMM50-201ENST00000350028 NFIAQ12857 509 aa18.93■□□□□ 0.62
SAMM50-201ENST00000350028 ARID5BQ14865 1188 aa18.93■□□□□ 0.62
SAMM50-201ENST00000350028 PDXDC2PQ6P474 469 aa18.93■□□□□ 0.62
SAMM50-201ENST00000350028 SERPINA10Q9UK55 444 aa18.93■□□□□ 0.62
SAMM50-201ENST00000350028 SRCAPQ6ZRS2 3230 aa18.93■□□□□ 0.62
SAMM50-201ENST00000350028 FRMPD2Q68DX3 1309 aaPredicted RBP18.93■□□□□ 0.62
SAMM50-201ENST00000350028 ZNF646O15015 1829 aaPredicted RBP18.93■□□□□ 0.62
SAMM50-201ENST00000350028 PSDA5PKW4 1024 aaPredicted RBP18.92■□□□□ 0.62
SAMM50-201ENST00000350028 SKILP12757 684 aa18.92■□□□□ 0.62
SAMM50-201ENST00000350028 ZNF543Q08ER8 600 aa18.92■□□□□ 0.62
SAMM50-201ENST00000350028 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
SAMM50-201ENST00000350028 ZNF18P17022 549 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 RBM5P52756 815 aaKnown RBP eCLIP18.91■□□□□ 0.62
SAMM50-201ENST00000350028 CCZ1BP86790 482 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 CCZ1P86791 482 aaPredicted RBP18.91■□□□□ 0.62
SAMM50-201ENST00000350028 FMR1Q06787 632 aaKnown RBP eCLIP18.91■□□□□ 0.62
SAMM50-201ENST00000350028 CFAP100Q494V2 611 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 GRIPAP1Q4V328 841 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 GPATCH4Q5T3I0 446 aaKnown RBP18.91■□□□□ 0.62
SAMM50-201ENST00000350028 NEK8Q86SG6 692 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 CCSER1Q9C0I3 900 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 TMEM60Q9H2L4 133 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.91■□□□□ 0.62
SAMM50-201ENST00000350028 PI4KBQ9UBF8 816 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 NFE2L3Q9Y4A8 694 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 SCN9AQ15858 1988 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 MPHOSPH10O00566 681 aaKnown RBP18.91■□□□□ 0.62
SAMM50-201ENST00000350028 NRDCO43847 1150 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 ZBTB7AO95365 584 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 EIF6P56537 245 aaKnown RBP18.91■□□□□ 0.62
SAMM50-201ENST00000350028 PPP1R18Q6NYC8 613 aa18.91■□□□□ 0.62
SAMM50-201ENST00000350028 DPF2Q92785 391 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms