RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 SLF1Q9BQI6 1058 aa13.1□□□□□ -0.31
UBE2A-201ENST00000346330 TINF2Q9BSI4 451 aa13.1□□□□□ -0.31
UBE2A-201ENST00000346330 MKNK2Q9HBH9 465 aa13.1□□□□□ -0.31
UBE2A-201ENST00000346330 INCENPQ9NQS7 918 aa13.1□□□□□ -0.31
UBE2A-201ENST00000346330 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
UBE2A-201ENST00000346330 PDLIM7Q9NR12 457 aa13.1□□□□□ -0.31
UBE2A-201ENST00000346330 DNAJC25-GNG10A0A024R161 153 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 MYADML2A6NDP7 307 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 SNAI1O95863 264 aaPredicted RBP13.09□□□□□ -0.31
UBE2A-201ENST00000346330 APPP05067 770 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 TDO2P48775 406 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 KCTD2Q14681 263 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 SHHQ15465 462 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 SNRNP48Q6IEG0 339 aaKnown RBP13.09□□□□□ -0.31
UBE2A-201ENST00000346330 GPR153Q6NV75 609 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 GIMAP6Q6P9H5 292 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 CCDC129Q6ZRS4 1044 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 IFNL3Q8IZI9 196 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 CPXCR1Q8N123 301 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 BADQ92934 168 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 KIFC2Q96AC6 838 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 FAM161BQ96MY7 647 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 RAVER2Q9HCJ3 691 aaKnown RBP13.09□□□□□ -0.31
UBE2A-201ENST00000346330 XPNPEP3Q9NQH7 507 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 SLC5A4Q9NY91 659 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 MTMR4Q9NYA4 1195 aa13.09□□□□□ -0.31
UBE2A-201ENST00000346330 PATL2C9JE40 543 aaKnown RBP13.08□□□□□ -0.32
UBE2A-201ENST00000346330 POTEB2H3BUK9 544 aa13.08□□□□□ -0.32
UBE2A-201ENST00000346330 ADAMTS4O75173 837 aa13.08□□□□□ -0.32
UBE2A-201ENST00000346330 EPHB4P54760 987 aa13.08□□□□□ -0.32
UBE2A-201ENST00000346330 TLE2Q04725 743 aa13.08□□□□□ -0.32
UBE2A-201ENST00000346330 GPATCH3Q96I76 525 aa13.08□□□□□ -0.32
UBE2A-201ENST00000346330 GUCD1Q96NT3 240 aa13.08□□□□□ -0.32
UBE2A-201ENST00000346330 LBHD1Q9BQE6 289 aaPredicted RBP13.08□□□□□ -0.32
UBE2A-201ENST00000346330 TEX13BQ9BXU2 312 aa13.08□□□□□ -0.32
UBE2A-201ENST00000346330 PHF24Q9UPV7 400 aa13.08□□□□□ -0.32
UBE2A-201ENST00000346330 DDX49Q9Y6V7 483 aaKnown RBP13.08□□□□□ -0.32
UBE2A-201ENST00000346330 COL11A1P12107 1806 aaPredicted RBP13.08□□□□□ -0.32
UBE2A-201ENST00000346330 SALL3Q9BXA9 1300 aa13.08□□□□□ -0.32
UBE2A-201ENST00000346330 DLL1O00548 723 aa13.07□□□□□ -0.32
UBE2A-201ENST00000346330 NMT2O60551 498 aa13.07□□□□□ -0.32
UBE2A-201ENST00000346330 ZFYP08048 801 aaPredicted RBP13.07□□□□□ -0.32
UBE2A-201ENST00000346330 RARBP10826 455 aa13.07□□□□□ -0.32
UBE2A-201ENST00000346330 PTGS1P23219 599 aa13.07□□□□□ -0.32
UBE2A-201ENST00000346330 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
UBE2A-201ENST00000346330 PRPF38AQ8NAV1 312 aaKnown RBP13.07□□□□□ -0.32
UBE2A-201ENST00000346330 MKL1Q969V6 931 aa13.07□□□□□ -0.32
UBE2A-201ENST00000346330 SLC38A10Q9HBR0 1119 aa13.07□□□□□ -0.32
UBE2A-201ENST00000346330 DIS3Q9Y2L1 958 aaKnown RBP13.07□□□□□ -0.32
UBE2A-201ENST00000346330 MUC3AQ02505 3323 aa13.07□□□□□ -0.32
UBE2A-201ENST00000346330 MYH7P12883 1935 aa13.07□□□□□ -0.32
UBE2A-201ENST00000346330 A0A1W2PQ45 241 aaPredicted RBP13.06□□□□□ -0.32
UBE2A-201ENST00000346330 A0A1W2PQY0 241 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 SNAP25P60880 206 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 CNTN2Q02246 1040 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 CTDSPL2Q05D32 466 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 VPS53Q5VIR6 699 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 ZNF444Q8N0Y2 327 aaPredicted RBP13.06□□□□□ -0.32
UBE2A-201ENST00000346330 NEDD1Q8NHV4 660 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 FSD1Q9BTV5 496 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 HOMER2Q9NSB8 354 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 NRBP1Q9UHY1 535 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 STXBP5LQ9Y2K9 1186 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 TTC41PQ6P2S7 1318 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 SYNRGQ9UMZ2 1314 aa13.06□□□□□ -0.32
UBE2A-201ENST00000346330 MYH8P13535 1937 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 ATP2A1O14983 1001 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 PQBP1O60828 265 aaKnown RBP13.05□□□□□ -0.32
UBE2A-201ENST00000346330 TTLL1O95922 423 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 AKR1A1P14550 325 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 GNAT2P19087 354 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 MX1P20591 662 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 TFAP4Q01664 338 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 PPARAQ07869 468 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 C1orf53Q5VUE5 145 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 SLFN13Q68D06 897 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 CCSAPQ6IQ19 270 aaPredicted RBP13.05□□□□□ -0.32
UBE2A-201ENST00000346330 GMCL1P1Q8NEA9 526 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 DDX11Q96FC9 970 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 IL17RBQ9NRM6 502 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 PRKAG2Q9UGJ0 569 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
UBE2A-201ENST00000346330 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.05□□□□□ -0.32
UBE2A-201ENST00000346330 ASTN1O14525 1302 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 ZNF536O15090 1300 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 PLIN4Q96Q06 1357 aa13.05□□□□□ -0.32
UBE2A-201ENST00000346330 ACLYP53396 1101 aa13.04□□□□□ -0.32
UBE2A-201ENST00000346330 MAMDC4Q6UXC1 1216 aa13.04□□□□□ -0.32
UBE2A-201ENST00000346330 KLHDC9Q8NEP7 349 aa13.04□□□□□ -0.32
UBE2A-201ENST00000346330 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
UBE2A-201ENST00000346330 CRBNQ96SW2 442 aa13.04□□□□□ -0.32
UBE2A-201ENST00000346330 KATNBL1Q9H079 304 aa13.04□□□□□ -0.32
UBE2A-201ENST00000346330 NAPBQ9H115 298 aa13.04□□□□□ -0.32
UBE2A-201ENST00000346330 CNPY2Q9Y2B0 182 aa13.04□□□□□ -0.32
UBE2A-201ENST00000346330 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
UBE2A-201ENST00000346330 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.03□□□□□ -0.32
UBE2A-201ENST00000346330 TMEM232C9JQI7 657 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 CTAGE5O15320 804 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 ZBED4O75132 1171 aa13.03□□□□□ -0.32
UBE2A-201ENST00000346330 CLTBP09497 229 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms