RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 RRP12Q5JTH9 1297 aaKnown RBP23.39■■□□□ 1.33
CLTA-202ENST00000345519 ANKS1AQ92625 1134 aa23.39■■□□□ 1.33
CLTA-202ENST00000345519 TMEM47Q9BQJ4 181 aa23.39■■□□□ 1.33
CLTA-202ENST00000345519 TEX13BQ9BXU2 312 aa23.39■■□□□ 1.33
CLTA-202ENST00000345519 RNF208Q9H0X6 261 aa23.39■■□□□ 1.33
CLTA-202ENST00000345519 RAD21O60216 631 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 ZKSCAN1P17029 563 aaPredicted RBP23.38■■□□□ 1.33
CLTA-202ENST00000345519 ADORA2AP29274 412 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 STAT3P40763 770 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 SLC1A4P43007 532 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 PTH1RQ03431 593 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 TRIM32Q13049 653 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 CCL14Q16627 93 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 FAM160B2Q86V87 743 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 DGKHQ86XP1 1220 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 DCAF4Q8WV16 495 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 MAP4K1Q92918 833 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 CNNM2Q9H8M5 875 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 TOMM22Q9NS69 142 aa23.38■■□□□ 1.33
CLTA-202ENST00000345519 BIN2Q9UBW5 565 aaPredicted RBP23.38■■□□□ 1.33
CLTA-202ENST00000345519 CYP21A2P08686 494 aa23.37■■□□□ 1.33
CLTA-202ENST00000345519 OLFML2BQ68BL8 750 aa23.37■■□□□ 1.33
CLTA-202ENST00000345519 BTNL9Q6UXG8 535 aa23.37■■□□□ 1.33
CLTA-202ENST00000345519 RASGRP2Q7LDG7 609 aa23.37■■□□□ 1.33
CLTA-202ENST00000345519 NPLOC4Q8TAT6 608 aa23.37■■□□□ 1.33
CLTA-202ENST00000345519 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.37■■□□□ 1.33
CLTA-202ENST00000345519 FLRT1Q9NZU1 646 aa23.37■■□□□ 1.33
CLTA-202ENST00000345519 ZNF536O15090 1300 aa23.36■■□□□ 1.33
CLTA-202ENST00000345519 SGPL1O95470 568 aa23.36■■□□□ 1.33
CLTA-202ENST00000345519 MCCP23508 829 aa23.36■■□□□ 1.33
CLTA-202ENST00000345519 SKAP1Q86WV1 359 aa23.36■■□□□ 1.33
CLTA-202ENST00000345519 U2AF1L4Q8WU68 220 aaKnown RBP23.36■■□□□ 1.33
CLTA-202ENST00000345519 CHURC1Q8WUH1 139 aa23.36■■□□□ 1.33
CLTA-202ENST00000345519 CCDC136Q96JN2 1154 aa23.36■■□□□ 1.33
CLTA-202ENST00000345519 KRT23Q9C075 422 aa23.36■■□□□ 1.33
CLTA-202ENST00000345519 U3KPZ7 1027 aaPredicted RBP23.36■■□□□ 1.33
CLTA-202ENST00000345519 B4E1Z4 1266 aa23.35■■□□□ 1.33
CLTA-202ENST00000345519 TMEM232C9JQI7 657 aa23.35■■□□□ 1.33
CLTA-202ENST00000345519 KDM4AO75164 1064 aa23.35■■□□□ 1.33
CLTA-202ENST00000345519 MYCP01106 439 aaPredicted RBP23.35■■□□□ 1.33
CLTA-202ENST00000345519 PDHBP11177 359 aa23.35■■□□□ 1.33
CLTA-202ENST00000345519 PRKAR2AP13861 404 aaKnown RBP23.35■■□□□ 1.33
CLTA-202ENST00000345519 CACNB2Q08289 660 aaPredicted RBP23.35■■□□□ 1.33
CLTA-202ENST00000345519 PLS1Q14651 629 aa23.35■■□□□ 1.33
CLTA-202ENST00000345519 CCDC178Q5BJE1 867 aa23.35■■□□□ 1.33
CLTA-202ENST00000345519 WDR78Q5VTH9 848 aa23.35■■□□□ 1.33
CLTA-202ENST00000345519 ERICH6BQ5W0A0 696 aa23.35■■□□□ 1.33
CLTA-202ENST00000345519 IQCA1Q86XH1 822 aa23.35■■□□□ 1.33
CLTA-202ENST00000345519 NCAPG2Q86XI2 1143 aa23.35■■□□□ 1.33
CLTA-202ENST00000345519 CWC22Q9HCG8 908 aaKnown RBP23.35■■□□□ 1.33
CLTA-202ENST00000345519 ZSWIM5Q9P217 1185 aa23.35■■□□□ 1.33
CLTA-202ENST00000345519 COBLO75128 1261 aa23.34■■□□□ 1.33
CLTA-202ENST00000345519 FCER1AP12319 257 aa23.34■■□□□ 1.33
CLTA-202ENST00000345519 SNRNP48Q6IEG0 339 aaKnown RBP23.34■■□□□ 1.33
CLTA-202ENST00000345519 KIFC2Q96AC6 838 aa23.34■■□□□ 1.33
CLTA-202ENST00000345519 ESYT1Q9BSJ8 1104 aa23.34■■□□□ 1.33
CLTA-202ENST00000345519 HMX1Q9NP08 348 aaPredicted RBP23.34■■□□□ 1.33
CLTA-202ENST00000345519 DIS3Q9Y2L1 958 aaKnown RBP23.34■■□□□ 1.33
CLTA-202ENST00000345519 RIPK3Q9Y572 518 aa23.34■■□□□ 1.33
CLTA-202ENST00000345519 DNAJC25-GNG10A0A024R161 153 aa23.33■■□□□ 1.33
CLTA-202ENST00000345519 ZBED4O75132 1171 aa23.33■■□□□ 1.33
CLTA-202ENST00000345519 KCTD1Q719H9 257 aa23.33■■□□□ 1.33
CLTA-202ENST00000345519 ENAHQ8N8S7 591 aaPredicted RBP23.33■■□□□ 1.33
CLTA-202ENST00000345519 LSG1Q9H089 658 aaKnown RBP23.33■■□□□ 1.33
CLTA-202ENST00000345519 MAML3Q96JK9 1138 aa23.32■■□□□ 1.32
CLTA-202ENST00000345519 ZSCAN10Q96SZ4 725 aaPredicted RBP23.32■■□□□ 1.32
CLTA-202ENST00000345519 RANBP17Q9H2T7 1088 aaKnown RBP23.32■■□□□ 1.32
CLTA-202ENST00000345519 PRR12Q9ULL5 1215 aa23.32■■□□□ 1.32
CLTA-202ENST00000345519 TNKSO95271 1327 aa23.32■■□□□ 1.32
CLTA-202ENST00000345519 ZNF543Q08ER8 600 aa23.31■■□□□ 1.32
CLTA-202ENST00000345519 SEC23AQ15436 765 aa23.31■■□□□ 1.32
CLTA-202ENST00000345519 ZNF792Q3KQV3 632 aa23.31■■□□□ 1.32
CLTA-202ENST00000345519 SAMD1Q6SPF0 538 aaPredicted RBP23.31■■□□□ 1.32
CLTA-202ENST00000345519 DPP9Q86TI2 863 aa23.31■■□□□ 1.32
CLTA-202ENST00000345519 ANKLE1Q8NAG6 615 aa23.31■■□□□ 1.32
CLTA-202ENST00000345519 CHST13Q8NET6 341 aa23.31■■□□□ 1.32
CLTA-202ENST00000345519 DEFB118Q96PH6 123 aa23.31■■□□□ 1.32
CLTA-202ENST00000345519 MMP19Q99542 508 aa23.31■■□□□ 1.32
CLTA-202ENST00000345519 SLC5A4Q9NY91 659 aa23.31■■□□□ 1.32
CLTA-202ENST00000345519 TAF6LQ9Y6J9 622 aa23.31■■□□□ 1.32
CLTA-202ENST00000345519 CYBAP13498 195 aa23.3■■□□□ 1.32
CLTA-202ENST00000345519 ZKSCAN3Q9BRR0 538 aa23.3■■□□□ 1.32
CLTA-202ENST00000345519 RAVER2Q9HCJ3 691 aaKnown RBP23.3■■□□□ 1.32
CLTA-202ENST00000345519 FBXO40Q9UH90 709 aa23.3■■□□□ 1.32
CLTA-202ENST00000345519 OGDHLQ9ULD0 1010 aa23.3■■□□□ 1.32
CLTA-202ENST00000345519 RBM8AQ9Y5S9 174 aaKnown RBP23.3■■□□□ 1.32
CLTA-202ENST00000345519 NEFLP07196 543 aa23.29■■□□□ 1.32
CLTA-202ENST00000345519 MNX1P50219 401 aaPredicted RBP23.29■■□□□ 1.32
CLTA-202ENST00000345519 KCTD2Q14681 263 aa23.29■■□□□ 1.32
CLTA-202ENST00000345519 TKFCQ3LXA3 575 aa23.29■■□□□ 1.32
CLTA-202ENST00000345519 GPATCH4Q5T3I0 446 aaKnown RBP23.29■■□□□ 1.32
CLTA-202ENST00000345519 MFSD14CQ5VZR4 134 aa23.29■■□□□ 1.32
CLTA-202ENST00000345519 LHX8Q68G74 356 aa23.29■■□□□ 1.32
CLTA-202ENST00000345519 STOX1Q6ZVD7 989 aa23.29■■□□□ 1.32
CLTA-202ENST00000345519 PNMA1Q8ND90 353 aa23.29■■□□□ 1.32
CLTA-202ENST00000345519 CEP290O15078 2479 aa23.28■■□□□ 1.32
CLTA-202ENST00000345519 E7EWF7 191 aa23.28■■□□□ 1.32
CLTA-202ENST00000345519 CCND3P30281 292 aaPredicted RBP23.28■■□□□ 1.32
CLTA-202ENST00000345519 CYB5R4Q7L1T6 521 aa23.28■■□□□ 1.32
CLTA-202ENST00000345519 MSL3Q8N5Y2 521 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms