RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SMCHD1A6NHR9 2005 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 STRNO43815 780 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 ORC4O43929 436 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 COL6A1P12109 1028 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 CYBAP13498 195 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 HAND2P61296 217 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 TTC22Q5TAA0 569 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 MFSD14CQ5VZR4 134 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 CHRDL2Q6WN34 429 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 RASGRP2Q7LDG7 609 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 DPP9Q86TI2 863 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 RIOX2Q8IUF8 465 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 SLF1Q9BQI6 1058 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 IL25Q9H293 177 aa17.11■□□□□ 0.33
HMGN3-202ENST00000344726 TSPY2A6NKD2 308 aa17.1■□□□□ 0.33
HMGN3-202ENST00000344726 RANBP6O60518 1105 aaKnown RBP17.1■□□□□ 0.33
HMGN3-202ENST00000344726 OLFML2BQ68BL8 750 aa17.1■□□□□ 0.33
HMGN3-202ENST00000344726 ABRAQ8N0Z2 381 aa17.1■□□□□ 0.33
HMGN3-202ENST00000344726 GMCL1P1Q8NEA9 526 aa17.1■□□□□ 0.33
HMGN3-202ENST00000344726 PRO3102Q9H379 93 aa17.1■□□□□ 0.33
HMGN3-202ENST00000344726 C11orf49Q9H6J7 331 aa17.1■□□□□ 0.33
HMGN3-202ENST00000344726 DIAPH3Q9NSV4 1193 aa17.1■□□□□ 0.33
HMGN3-202ENST00000344726 SYNPO2Q9UMS6 1093 aa17.1■□□□□ 0.33
HMGN3-202ENST00000344726 RIPK3Q9Y572 518 aa17.1■□□□□ 0.33
HMGN3-202ENST00000344726 TRIOBPQ9H2D6 2365 aa17.1■□□□□ 0.33
HMGN3-202ENST00000344726 EVI5O60447 810 aa17.09■□□□□ 0.33
HMGN3-202ENST00000344726 SLC25A27O95847 323 aa17.09■□□□□ 0.33
HMGN3-202ENST00000344726 PGK2P07205 417 aa17.09■□□□□ 0.33
HMGN3-202ENST00000344726 STAT3P40763 770 aa17.09■□□□□ 0.33
HMGN3-202ENST00000344726 NOVP48745 357 aa17.09■□□□□ 0.33
HMGN3-202ENST00000344726 SLFN13Q68D06 897 aa17.09■□□□□ 0.33
HMGN3-202ENST00000344726 TBC1D10CQ8IV04 446 aa17.09■□□□□ 0.33
HMGN3-202ENST00000344726 MAML3Q96JK9 1138 aa17.09■□□□□ 0.33
HMGN3-202ENST00000344726 RBM27Q9P2N5 1060 aaKnown RBP17.09■□□□□ 0.33
HMGN3-202ENST00000344726 DDX20Q9UHI6 824 aaKnown RBP17.09■□□□□ 0.33
HMGN3-202ENST00000344726 SZT2Q5T011 3432 aa17.08■□□□□ 0.33
HMGN3-202ENST00000344726 FCER1AP12319 257 aa17.08■□□□□ 0.32
HMGN3-202ENST00000344726 FXR1P51114 621 aaKnown RBP eCLIP17.08■□□□□ 0.32
HMGN3-202ENST00000344726 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.32
HMGN3-202ENST00000344726 PRAMEF19Q5SWL8 479 aa17.08■□□□□ 0.32
HMGN3-202ENST00000344726 CHMP4CQ96CF2 233 aa17.08■□□□□ 0.32
HMGN3-202ENST00000344726 STX8Q9UNK0 236 aa17.08■□□□□ 0.32
HMGN3-202ENST00000344726 HIP1O00291 1037 aa17.07■□□□□ 0.32
HMGN3-202ENST00000344726 BMP3P12645 472 aa17.07■□□□□ 0.32
HMGN3-202ENST00000344726 CNGA1P29973 690 aa17.07■□□□□ 0.32
HMGN3-202ENST00000344726 RRP12Q5JTH9 1297 aaKnown RBP17.07■□□□□ 0.32
HMGN3-202ENST00000344726 SNRNP48Q6IEG0 339 aaKnown RBP17.07■□□□□ 0.32
HMGN3-202ENST00000344726 C7orf61Q8IZ16 206 aa17.07■□□□□ 0.32
HMGN3-202ENST00000344726 PRPF38AQ8NAV1 312 aaKnown RBP17.07■□□□□ 0.32
HMGN3-202ENST00000344726 STAG1Q8WVM7 1258 aa17.07■□□□□ 0.32
HMGN3-202ENST00000344726 KIFC2Q96AC6 838 aa17.07■□□□□ 0.32
HMGN3-202ENST00000344726 MMP19Q99542 508 aa17.07■□□□□ 0.32
HMGN3-202ENST00000344726 TOMM22Q9NS69 142 aa17.07■□□□□ 0.32
HMGN3-202ENST00000344726 NR2E3Q9Y5X4 410 aa17.07■□□□□ 0.32
HMGN3-202ENST00000344726 MCM3APO60318 1980 aa17.07■□□□□ 0.32
HMGN3-202ENST00000344726 NEDD4P46934 1319 aa17.06■□□□□ 0.32
HMGN3-202ENST00000344726 MCCP23508 829 aa17.06■□□□□ 0.32
HMGN3-202ENST00000344726 ZNF792Q3KQV3 632 aa17.06■□□□□ 0.32
HMGN3-202ENST00000344726 AKNAD1Q5T1N1 836 aa17.06■□□□□ 0.32
HMGN3-202ENST00000344726 ANO1Q5XXA6 986 aa17.06■□□□□ 0.32
HMGN3-202ENST00000344726 GMCL1Q96IK5 515 aa17.06■□□□□ 0.32
HMGN3-202ENST00000344726 TEX13BQ9BXU2 312 aa17.06■□□□□ 0.32
HMGN3-202ENST00000344726 SLC38A10Q9HBR0 1119 aa17.06■□□□□ 0.32
HMGN3-202ENST00000344726 RAVER2Q9HCJ3 691 aaKnown RBP17.06■□□□□ 0.32
HMGN3-202ENST00000344726 FEM1BQ9UK73 627 aa17.06■□□□□ 0.32
HMGN3-202ENST00000344726 LAMA3Q16787 3333 aa17.06■□□□□ 0.32
HMGN3-202ENST00000344726 TMEM232C9JQI7 657 aa17.05■□□□□ 0.32
HMGN3-202ENST00000344726 ATP2A1O14983 1001 aa17.05■□□□□ 0.32
HMGN3-202ENST00000344726 LRRC26Q2I0M4 334 aa17.05■□□□□ 0.32
HMGN3-202ENST00000344726 CPXCR1Q8N123 301 aa17.05■□□□□ 0.32
HMGN3-202ENST00000344726 DSCC1Q9BVC3 393 aa17.05■□□□□ 0.32
HMGN3-202ENST00000344726 TCP11L1Q9NUJ3 509 aa17.05■□□□□ 0.32
HMGN3-202ENST00000344726 ZMYND8Q9ULU4 1186 aaPredicted RBP17.05■□□□□ 0.32
HMGN3-202ENST00000344726 ZNF536O15090 1300 aa17.04■□□□□ 0.32
HMGN3-202ENST00000344726 TAL1P17542 331 aaPredicted RBP17.04■□□□□ 0.32
HMGN3-202ENST00000344726 SLC1A4P43007 532 aa17.04■□□□□ 0.32
HMGN3-202ENST00000344726 KCTD2Q14681 263 aa17.04■□□□□ 0.32
HMGN3-202ENST00000344726 PPP4R3BQ5MIZ7 849 aa17.04■□□□□ 0.32
HMGN3-202ENST00000344726 RCSD1Q6JBY9 416 aa17.04■□□□□ 0.32
HMGN3-202ENST00000344726 MFSD6Q6ZSS7 791 aa17.04■□□□□ 0.32
HMGN3-202ENST00000344726 KCTD1Q719H9 257 aa17.04■□□□□ 0.32
HMGN3-202ENST00000344726 DNAJC25-GNG10A0A024R161 153 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 ZNF213O14771 459 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 SEPT4O43236 478 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 MSCO60682 206 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 ZBED4O75132 1171 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 SYN1P17600 705 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 CHMLP26374 656 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 SLC4A3P48751 1232 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 FGD4Q96M96 766 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 TMEM47Q9BQJ4 181 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 TINF2Q9BSI4 451 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 SLC5A4Q9NY91 659 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 MTMR7Q9Y216 660 aa17.03■□□□□ 0.32
HMGN3-202ENST00000344726 PCP11498 1178 aaKnown RBP17.02■□□□□ 0.32
HMGN3-202ENST00000344726 COPB2P35606 906 aa17.02■□□□□ 0.32
HMGN3-202ENST00000344726 STAT2P52630 851 aa17.02■□□□□ 0.32
HMGN3-202ENST00000344726 SNAP25P60880 206 aa17.02■□□□□ 0.32
HMGN3-202ENST00000344726 GJC2Q5T442 439 aaPredicted RBP17.02■□□□□ 0.32
HMGN3-202ENST00000344726 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 247.6 ms