RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 GJC2Q5T442 439 aaPredicted RBP14.76□□□□□ -0.05
SGCA-202ENST00000344627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.76□□□□□ -0.05
SGCA-202ENST00000344627 ZNF467Q7Z7K2 595 aaPredicted RBP14.76□□□□□ -0.05
SGCA-202ENST00000344627 PRPF38AQ8NAV1 312 aaKnown RBP14.76□□□□□ -0.05
SGCA-202ENST00000344627 EVI5LQ96CN4 794 aa14.76□□□□□ -0.05
SGCA-202ENST00000344627 TEX13BQ9BXU2 312 aa14.76□□□□□ -0.05
SGCA-202ENST00000344627 CNPY2Q9Y2B0 182 aa14.76□□□□□ -0.05
SGCA-202ENST00000344627 TACC3Q9Y6A5 838 aa14.76□□□□□ -0.05
SGCA-202ENST00000344627 SYNGAP1Q96PV0 1343 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 TRIM6-TRIM34B2RNG4 842 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 F5H6K3 240 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 DLL1O00548 723 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 NDUFB10O96000 172 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 ATN1P54259 1190 aaPredicted RBP14.75□□□□□ -0.05
SGCA-202ENST00000344627 OAZ1P54368 228 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 KLRC3Q07444 240 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 LRRC41Q15345 812 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 ZNF792Q3KQV3 632 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 FAM47AQ5JRC9 791 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 MKL1Q969V6 931 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 CHMP4CQ96CF2 233 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 CEP95Q96GE4 821 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 SLF1Q9BQI6 1058 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 XPNPEP3Q9NQH7 507 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 FBXO40Q9UH90 709 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 ZNF214Q9UL59 606 aaPredicted RBP14.75□□□□□ -0.05
SGCA-202ENST00000344627 PHF24Q9UPV7 400 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 ATP11BQ9Y2G3 1177 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 PARP14Q460N5 1801 aa14.75□□□□□ -0.05
SGCA-202ENST00000344627 MOXD2PA6NHM9 499 aa14.74□□□□□ -0.05
SGCA-202ENST00000344627 MYCNP04198 464 aaPredicted RBP14.74□□□□□ -0.05
SGCA-202ENST00000344627 TFAP4Q01664 338 aa14.74□□□□□ -0.05
SGCA-202ENST00000344627 PPARAQ07869 468 aa14.74□□□□□ -0.05
SGCA-202ENST00000344627 AAMPQ13685 434 aa14.74□□□□□ -0.05
SGCA-202ENST00000344627 MAMDC4Q6UXC1 1216 aa14.74□□□□□ -0.05
SGCA-202ENST00000344627 LRRC47Q8N1G4 583 aaKnown RBP14.74□□□□□ -0.05
SGCA-202ENST00000344627 NUP133Q8WUM0 1156 aa14.74□□□□□ -0.05
SGCA-202ENST00000344627 RILPL2Q969X0 211 aa14.74□□□□□ -0.05
SGCA-202ENST00000344627 KIFC2Q96AC6 838 aa14.74□□□□□ -0.05
SGCA-202ENST00000344627 SALL3Q9BXA9 1300 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 GREB1LQ9C091 1923 aaPredicted RBP14.73□□□□□ -0.05
SGCA-202ENST00000344627 TMEM265A0A087WTH1 108 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 ZBED4O75132 1171 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 TTLL1O95922 423 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 ADCYAP1R1P41586 468 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 SMAD3P84022 425 aaKnown RBP14.73□□□□□ -0.05
SGCA-202ENST00000344627 CTDSPL2Q05D32 466 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 ZNF697Q5TEC3 545 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 CPXCR1Q8N123 301 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 REPS2Q8NFH8 660 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 EXOC6Q8TAG9 804 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 DDX11Q96FC9 970 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 TOX2Q96NM4 488 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 MTMR4Q9NYA4 1195 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 FEM1BQ9UK73 627 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 FAM184BQ9ULE4 1060 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 DNAH12Q6ZR08 3092 aa14.73□□□□□ -0.05
SGCA-202ENST00000344627 MROH7Q68CQ1 1323 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 TSPY2A6NKD2 308 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 PGK2P07205 417 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 IKQ13123 557 aaPredicted RBP14.72□□□□□ -0.05
SGCA-202ENST00000344627 PRAMEF19Q5SWL8 479 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 VPS53Q5VIR6 699 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 ANO1Q5XXA6 986 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 SLFN13Q68D06 897 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 TICAM2Q86XR7 235 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 CHST13Q8NET6 341 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 NEDD1Q8NHV4 660 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 SPC25Q9HBM1 224 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 INCENPQ9NQS7 918 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 HELLSQ9NRZ9 838 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 TOMM22Q9NS69 142 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 MTMR7Q9Y216 660 aa14.72□□□□□ -0.05
SGCA-202ENST00000344627 IGKV6D-41A0A0C4DH26 115 aa14.71□□□□□ -0.05
SGCA-202ENST00000344627 RANBP6O60518 1105 aaKnown RBP14.71□□□□□ -0.05
SGCA-202ENST00000344627 CLTBP09497 229 aa14.71□□□□□ -0.05
SGCA-202ENST00000344627 ZNF865P0CJ78 1059 aaPredicted RBP14.71□□□□□ -0.05
SGCA-202ENST00000344627 TRIM60Q495X7 471 aa14.71□□□□□ -0.05
SGCA-202ENST00000344627 MCMDC2Q4G0Z9 681 aa14.71□□□□□ -0.05
SGCA-202ENST00000344627 SNRNP48Q6IEG0 339 aaKnown RBP14.71□□□□□ -0.05
SGCA-202ENST00000344627 CCDC174Q6PII3 467 aa14.71□□□□□ -0.05
SGCA-202ENST00000344627 PCSK9Q8NBP7 692 aaKnown RBP14.71□□□□□ -0.05
SGCA-202ENST00000344627 GMCL1P1Q8NEA9 526 aa14.71□□□□□ -0.05
SGCA-202ENST00000344627 FAM227BQ96M60 508 aa14.71□□□□□ -0.05
SGCA-202ENST00000344627 SEZ6LQ9BYH1 1024 aa14.71□□□□□ -0.05
SGCA-202ENST00000344627 PDLIM7Q9NR12 457 aa14.71□□□□□ -0.05
SGCA-202ENST00000344627 SMCHD1A6NHR9 2005 aa14.71□□□□□ -0.05
SGCA-202ENST00000344627 FRMPD3Q5JV73 1810 aa14.71□□□□□ -0.06
SGCA-202ENST00000344627 PLXNA1Q9UIW2 1896 aa14.7□□□□□ -0.06
SGCA-202ENST00000344627 DNAJC25-GNG10A0A024R161 153 aa14.7□□□□□ -0.06
SGCA-202ENST00000344627 KIAA0355O15063 1070 aa14.7□□□□□ -0.06
SGCA-202ENST00000344627 DUSP11O75319 330 aaKnown RBP14.7□□□□□ -0.06
SGCA-202ENST00000344627 IGHDP01880 384 aa14.7□□□□□ -0.06
SGCA-202ENST00000344627 BMP3P12645 472 aa14.7□□□□□ -0.06
SGCA-202ENST00000344627 CST5P28325 142 aaPredicted RBP14.7□□□□□ -0.06
SGCA-202ENST00000344627 RRP12Q5JTH9 1297 aaKnown RBP14.7□□□□□ -0.06
SGCA-202ENST00000344627 ANKRD33Q7Z3H0 272 aa14.7□□□□□ -0.06
SGCA-202ENST00000344627 CHD1LQ86WJ1 897 aa14.7□□□□□ -0.06
SGCA-202ENST00000344627 ABHD16BQ9H3Z7 469 aa14.7□□□□□ -0.06
SGCA-202ENST00000344627 RAVER2Q9HCJ3 691 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms