RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 SLC38A10Q9HBR0 1119 aa23.7■■□□□ 1.38
CEACAM3-201ENST00000344550 IL17RBQ9NRM6 502 aa23.7■■□□□ 1.38
CEACAM3-201ENST00000344550 CTDP1Q9Y5B0 961 aaPredicted RBP23.7■■□□□ 1.38
CEACAM3-201ENST00000344550 CEP290O15078 2479 aa23.69■■□□□ 1.38
CEACAM3-201ENST00000344550 COBLO75128 1261 aa23.69■■□□□ 1.38
CEACAM3-201ENST00000344550 RCSD1Q6JBY9 416 aa23.69■■□□□ 1.38
CEACAM3-201ENST00000344550 SAMD1Q6SPF0 538 aaPredicted RBP23.69■■□□□ 1.38
CEACAM3-201ENST00000344550 LRRC47Q8N1G4 583 aaKnown RBP23.69■■□□□ 1.38
CEACAM3-201ENST00000344550 MSL3Q8N5Y2 521 aaKnown RBP23.69■■□□□ 1.38
CEACAM3-201ENST00000344550 TTC14Q96N46 770 aa23.69■■□□□ 1.38
CEACAM3-201ENST00000344550 FBXO40Q9UH90 709 aa23.69■■□□□ 1.38
CEACAM3-201ENST00000344550 STX8Q9UNK0 236 aa23.69■■□□□ 1.38
CEACAM3-201ENST00000344550 CCND3P30281 292 aaPredicted RBP23.68■■□□□ 1.38
CEACAM3-201ENST00000344550 SLC1A4P43007 532 aa23.68■■□□□ 1.38
CEACAM3-201ENST00000344550 STAT2P52630 851 aa23.68■■□□□ 1.38
CEACAM3-201ENST00000344550 AKNAD1Q5T1N1 836 aa23.68■■□□□ 1.38
CEACAM3-201ENST00000344550 MFSD6Q6ZSS7 791 aa23.68■■□□□ 1.38
CEACAM3-201ENST00000344550 STAG1Q8WVM7 1258 aa23.68■■□□□ 1.38
CEACAM3-201ENST00000344550 MAML3Q96JK9 1138 aa23.68■■□□□ 1.38
CEACAM3-201ENST00000344550 DDX20Q9UHI6 824 aaKnown RBP23.68■■□□□ 1.38
CEACAM3-201ENST00000344550 CYBAP13498 195 aa23.67■■□□□ 1.38
CEACAM3-201ENST00000344550 MNX1P50219 401 aaPredicted RBP23.67■■□□□ 1.38
CEACAM3-201ENST00000344550 CHST13Q8NET6 341 aa23.67■■□□□ 1.38
CEACAM3-201ENST00000344550 KIFC2Q96AC6 838 aa23.67■■□□□ 1.38
CEACAM3-201ENST00000344550 DSCC1Q9BVC3 393 aa23.67■■□□□ 1.38
CEACAM3-201ENST00000344550 CTNNA3Q9UI47 895 aa23.67■■□□□ 1.38
CEACAM3-201ENST00000344550 COL11A1P12107 1806 aaPredicted RBP23.66■■□□□ 1.38
CEACAM3-201ENST00000344550 H0YGN5 161 aa23.66■■□□□ 1.38
CEACAM3-201ENST00000344550 EVI5O60447 810 aa23.66■■□□□ 1.38
CEACAM3-201ENST00000344550 CYP2C19P33261 490 aa23.66■■□□□ 1.38
CEACAM3-201ENST00000344550 SNRNP48Q6IEG0 339 aaKnown RBP23.66■■□□□ 1.38
CEACAM3-201ENST00000344550 CWC27Q6UX04 472 aaKnown RBP23.66■■□□□ 1.38
CEACAM3-201ENST00000344550 C11orf49Q9H6J7 331 aa23.66■■□□□ 1.38
CEACAM3-201ENST00000344550 ZNF213O14771 459 aa23.65■■□□□ 1.38
CEACAM3-201ENST00000344550 SEPT4O43236 478 aa23.65■■□□□ 1.38
CEACAM3-201ENST00000344550 TOP1P11387 765 aaKnown RBP23.65■■□□□ 1.38
CEACAM3-201ENST00000344550 ZNF792Q3KQV3 632 aa23.65■■□□□ 1.38
CEACAM3-201ENST00000344550 CCDC178Q5BJE1 867 aa23.65■■□□□ 1.38
CEACAM3-201ENST00000344550 DCAF4Q8WV16 495 aa23.65■■□□□ 1.38
CEACAM3-201ENST00000344550 INCENPQ9NQS7 918 aa23.65■■□□□ 1.38
CEACAM3-201ENST00000344550 TOMM22Q9NS69 142 aa23.65■■□□□ 1.38
CEACAM3-201ENST00000344550 TMEM232C9JQI7 657 aa23.64■■□□□ 1.37
CEACAM3-201ENST00000344550 COL6A1P12109 1028 aa23.64■■□□□ 1.37
CEACAM3-201ENST00000344550 TKFCQ3LXA3 575 aa23.64■■□□□ 1.37
CEACAM3-201ENST00000344550 TTC22Q5TAA0 569 aa23.64■■□□□ 1.37
CEACAM3-201ENST00000344550 ZNF467Q7Z7K2 595 aaPredicted RBP23.64■■□□□ 1.37
CEACAM3-201ENST00000344550 ESR2Q92731 530 aa23.64■■□□□ 1.37
CEACAM3-201ENST00000344550 TACC3Q9Y6A5 838 aa23.64■■□□□ 1.37
CEACAM3-201ENST00000344550 RAD50Q92878 1312 aa23.63■■□□□ 1.37
CEACAM3-201ENST00000344550 DNAJC25-GNG10A0A024R161 153 aa23.63■■□□□ 1.37
CEACAM3-201ENST00000344550 MCCP23508 829 aa23.63■■□□□ 1.37
CEACAM3-201ENST00000344550 CNGA1P29973 690 aa23.63■■□□□ 1.37
CEACAM3-201ENST00000344550 ARRDC4Q8NCT1 418 aa23.63■■□□□ 1.37
CEACAM3-201ENST00000344550 DIS3LQ8TF46 1054 aaKnown RBP23.63■■□□□ 1.37
CEACAM3-201ENST00000344550 RUFY2Q8WXA3 655 aa23.63■■□□□ 1.37
CEACAM3-201ENST00000344550 TINF2Q9BSI4 451 aa23.63■■□□□ 1.37
CEACAM3-201ENST00000344550 PNMA2Q9UL42 364 aa23.63■■□□□ 1.37
CEACAM3-201ENST00000344550 NMT2O60551 498 aa23.62■■□□□ 1.37
CEACAM3-201ENST00000344550 SLC34A2O95436 690 aa23.62■■□□□ 1.37
CEACAM3-201ENST00000344550 PDE4AP27815 886 aa23.62■■□□□ 1.37
CEACAM3-201ENST00000344550 CPXCR1Q8N123 301 aa23.62■■□□□ 1.37
CEACAM3-201ENST00000344550 TRPV1Q8NER1 839 aa23.62■■□□□ 1.37
CEACAM3-201ENST00000344550 DDX11Q96FC9 970 aa23.62■■□□□ 1.37
CEACAM3-201ENST00000344550 ZNFX1Q9P2E3 1918 aaKnown RBP23.62■■□□□ 1.37
CEACAM3-201ENST00000344550 DNM1LO00429 736 aa23.61■■□□□ 1.37
CEACAM3-201ENST00000344550 IMMTQ16891 758 aaKnown RBP23.61■■□□□ 1.37
CEACAM3-201ENST00000344550 RRP12Q5JTH9 1297 aaKnown RBP23.61■■□□□ 1.37
CEACAM3-201ENST00000344550 MAMDC4Q6UXC1 1216 aa23.61■■□□□ 1.37
CEACAM3-201ENST00000344550 BTNL9Q6UXG8 535 aa23.61■■□□□ 1.37
CEACAM3-201ENST00000344550 DGKHQ86XP1 1220 aa23.61■■□□□ 1.37
CEACAM3-201ENST00000344550 RAVER2Q9HCJ3 691 aaKnown RBP23.61■■□□□ 1.37
CEACAM3-201ENST00000344550 RIPK3Q9Y572 518 aa23.61■■□□□ 1.37
CEACAM3-201ENST00000344550 SYNGAP1Q96PV0 1343 aa23.6■■□□□ 1.37
CEACAM3-201ENST00000344550 HAND2P61296 217 aa23.6■■□□□ 1.37
CEACAM3-201ENST00000344550 IKQ13123 557 aaPredicted RBP23.6■■□□□ 1.37
CEACAM3-201ENST00000344550 HABP4Q5JVS0 413 aaKnown RBP23.6■■□□□ 1.37
CEACAM3-201ENST00000344550 IQCA1Q86XH1 822 aa23.6■■□□□ 1.37
CEACAM3-201ENST00000344550 TMEM47Q9BQJ4 181 aa23.6■■□□□ 1.37
CEACAM3-201ENST00000344550 PGK2P07205 417 aa23.59■■□□□ 1.37
CEACAM3-201ENST00000344550 TBC1D10CQ8IV04 446 aa23.59■■□□□ 1.37
CEACAM3-201ENST00000344550 CNNM2Q9H8M5 875 aa23.59■■□□□ 1.37
CEACAM3-201ENST00000344550 CNPY2Q9Y2B0 182 aa23.59■■□□□ 1.37
CEACAM3-201ENST00000344550 GSPT1P15170 499 aaKnown RBP23.58■■□□□ 1.37
CEACAM3-201ENST00000344550 KCTD1Q719H9 257 aa23.58■■□□□ 1.37
CEACAM3-201ENST00000344550 ANKRD35Q8N283 1001 aa23.58■■□□□ 1.37
CEACAM3-201ENST00000344550 ANKS1AQ92625 1134 aa23.58■■□□□ 1.37
CEACAM3-201ENST00000344550 ACAD9Q9H845 621 aa23.58■■□□□ 1.37
CEACAM3-201ENST00000344550 PRR12Q9ULL5 1215 aa23.58■■□□□ 1.37
CEACAM3-201ENST00000344550 ISY1Q9ULR0 285 aaKnown RBP23.58■■□□□ 1.37
CEACAM3-201ENST00000344550 PFASO15067 1338 aa23.58■■□□□ 1.36
CEACAM3-201ENST00000344550 A0A1W2PPC1 479 aa23.57■■□□□ 1.36
CEACAM3-201ENST00000344550 IRX6P78412 446 aaPredicted RBP23.57■■□□□ 1.36
CEACAM3-201ENST00000344550 KRT23Q9C075 422 aa23.57■■□□□ 1.36
CEACAM3-201ENST00000344550 COLQQ9Y215 455 aaPredicted RBP23.57■■□□□ 1.36
CEACAM3-201ENST00000344550 ZNF536O15090 1300 aa23.57■■□□□ 1.36
CEACAM3-201ENST00000344550 SNHG28P0DPA3 235 aa23.56■■□□□ 1.36
CEACAM3-201ENST00000344550 GPATCH4Q5T3I0 446 aaKnown RBP23.56■■□□□ 1.36
CEACAM3-201ENST00000344550 LAMA4Q16363 1823 aa23.55■■□□□ 1.36
CEACAM3-201ENST00000344550 ICAM1P05362 532 aa23.55■■□□□ 1.36
CEACAM3-201ENST00000344550 RARBP10826 455 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms