RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 ISY1Q9ULR0 285 aaKnown RBP11.22□□□□□ -0.61
CLDN18-202ENST00000343735 MTMR6Q9Y217 621 aa11.22□□□□□ -0.61
CLDN18-202ENST00000343735 F5H6K3 240 aa11.21□□□□□ -0.61
CLDN18-202ENST00000343735 hCG_1984214I3L0E3 225 aa11.21□□□□□ -0.61
CLDN18-202ENST00000343735 KLRC3Q07444 240 aa11.21□□□□□ -0.61
CLDN18-202ENST00000343735 ZNF543Q08ER8 600 aa11.21□□□□□ -0.61
CLDN18-202ENST00000343735 TRAF1Q13077 416 aa11.21□□□□□ -0.61
CLDN18-202ENST00000343735 RRP1BQ14684 758 aaKnown RBP11.21□□□□□ -0.61
CLDN18-202ENST00000343735 SAFBQ15424 915 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLDN18-202ENST00000343735 ARMC9Q7Z3E5 817 aa11.21□□□□□ -0.61
CLDN18-202ENST00000343735 NBPF11Q86T75 865 aa11.21□□□□□ -0.61
CLDN18-202ENST00000343735 LUZP1Q86V48 1076 aa11.21□□□□□ -0.61
CLDN18-202ENST00000343735 ZNF713Q8N859 430 aaPredicted RBP11.21□□□□□ -0.61
CLDN18-202ENST00000343735 RRP36Q96EU6 259 aaKnown RBP11.21□□□□□ -0.61
CLDN18-202ENST00000343735 RRAGCQ9HB90 399 aa11.21□□□□□ -0.61
CLDN18-202ENST00000343735 SEC63Q9UGP8 760 aaKnown RBP11.21□□□□□ -0.61
CLDN18-202ENST00000343735 CSADQ9Y600 493 aa11.21□□□□□ -0.61
CLDN18-202ENST00000343735 BAZ2BQ9UIF8 2168 aaKnown RBP11.21□□□□□ -0.61
CLDN18-202ENST00000343735 FDPSP14324 419 aaKnown RBP11.21□□□□□ -0.62
CLDN18-202ENST00000343735 MARCKSP29966 332 aaPredicted RBP11.21□□□□□ -0.62
CLDN18-202ENST00000343735 SF3A1Q15459 793 aaKnown RBP11.21□□□□□ -0.62
CLDN18-202ENST00000343735 CCDC96Q2M329 555 aa11.21□□□□□ -0.62
CLDN18-202ENST00000343735 LPAR1Q92633 364 aa11.21□□□□□ -0.62
CLDN18-202ENST00000343735 CDCA5Q96FF9 252 aa11.21□□□□□ -0.62
CLDN18-202ENST00000343735 WDR18Q9BV38 432 aa11.21□□□□□ -0.62
CLDN18-202ENST00000343735 SCAF8Q9UPN6 1271 aaKnown RBP11.21□□□□□ -0.62
CLDN18-202ENST00000343735 PTMSP20962 102 aa11.21□□□□□ -0.62
CLDN18-202ENST00000343735 SRBD1Q8N5C6 995 aaKnown RBP11.21□□□□□ -0.62
CLDN18-202ENST00000343735 CCDC12Q8WUD4 166 aaPredicted RBP11.21□□□□□ -0.62
CLDN18-202ENST00000343735 FEZ1Q99689 392 aa11.21□□□□□ -0.62
CLDN18-202ENST00000343735 SH3GLB2Q9NR46 395 aa11.21□□□□□ -0.62
CLDN18-202ENST00000343735 V9GY48 417 aaPredicted RBP11.21□□□□□ -0.62
CLDN18-202ENST00000343735 ADM5C9JUS6 153 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 PLEKHA8P1O95397 391 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 SLURP2P0DP57 97 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 ME1P48163 572 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 FUT2Q10981 343 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 USP17L2Q6R6M4 530 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 SIAH1Q8IUQ4 282 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 FBXO18Q8NFZ0 1043 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 VCPKMTQ9H867 229 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 BRMS1Q9HCU9 246 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 C19orf81C9J6K1 198 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 RAD21O60216 631 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 USP2O75604 605 aaPredicted RBP11.2□□□□□ -0.62
CLDN18-202ENST00000343735 BMP3P12645 472 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLDN18-202ENST00000343735 KIAA1683Q9H0B3 1180 aa11.2□□□□□ -0.62
CLDN18-202ENST00000343735 CNTNAP5Q8WYK1 1306 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 USP17L10C9JJH3 530 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 FKBP1BP68106 108 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 MAP3K11Q16584 847 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 PRAMEF18Q5VWM3 479 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 CLEC17AQ6ZS10 378 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 ANKRD13AQ8IZ07 590 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
CLDN18-202ENST00000343735 CHURC1Q8WUH1 139 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 UIMC1Q96RL1 719 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 PPP1R9BQ96SB3 815 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 RIOX1Q9H6W3 641 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 PLA2G6O60733 806 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 SCG2P13521 617 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 JAG1P78504 1218 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 PFKFB3Q16875 520 aaPredicted RBP11.19□□□□□ -0.62
CLDN18-202ENST00000343735 FAM160B2Q86V87 743 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 CLEC10AQ8IUN9 316 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 CCDC148Q8NFR7 591 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 NDUFB10O96000 172 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 PTPRAP18433 802 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 INPP5BP32019 993 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 TTLL12Q14166 644 aaPredicted RBP11.19□□□□□ -0.62
CLDN18-202ENST00000343735 ZRSR1Q15695 479 aaKnown RBP11.19□□□□□ -0.62
CLDN18-202ENST00000343735 GALNT17Q6IS24 598 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 ZNF280CQ8ND82 737 aa11.19□□□□□ -0.62
CLDN18-202ENST00000343735 CALML3P27482 149 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 CSPP1Q1MSJ5 1256 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 ATL3Q6DD88 541 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 GPCPD1Q9NPB8 672 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 SPDYE4A6NLX3 237 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 WDR46O15213 610 aaKnown RBP11.18□□□□□ -0.62
CLDN18-202ENST00000343735 GOLGA8HP0CJ92 632 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 BTNL9Q6UXG8 535 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 BRAPQ7Z569 592 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 ZNF592Q92610 1267 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 GLIS2Q9BZE0 524 aaPredicted RBP11.18□□□□□ -0.62
CLDN18-202ENST00000343735 FEM1BQ9UK73 627 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 PNMA2Q9UL42 364 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 MYH4Q9Y623 1939 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 FRMPD2Q68DX3 1309 aaPredicted RBP11.18□□□□□ -0.62
CLDN18-202ENST00000343735 A0A1W2PRG0 241 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 ADCY5O95622 1261 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 IKQ13123 557 aaPredicted RBP11.18□□□□□ -0.62
CLDN18-202ENST00000343735 LRSAM1Q6UWE0 723 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 DNAJC25Q9H1X3 360 aa11.18□□□□□ -0.62
CLDN18-202ENST00000343735 PNMA6FA0A0J9YX94 578 aa11.17□□□□□ -0.62
CLDN18-202ENST00000343735 KRT40Q6A162 431 aa11.17□□□□□ -0.62
CLDN18-202ENST00000343735 ACER1Q8TDN7 264 aa11.17□□□□□ -0.62
CLDN18-202ENST00000343735 ZKSCAN4Q969J2 545 aaPredicted RBP11.17□□□□□ -0.62
CLDN18-202ENST00000343735 GLT8D2Q9H1C3 349 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms