RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 ELP1O95163 1332 aa21.49■■□□□ 1.03
MUC1-204ENST00000343256 ARVCFO00192 962 aa21.48■■□□□ 1.03
MUC1-204ENST00000343256 WDR46O15213 610 aaKnown RBP21.48■■□□□ 1.03
MUC1-204ENST00000343256 ADCY6O43306 1168 aa21.48■■□□□ 1.03
MUC1-204ENST00000343256 ICA1Q05084 483 aa21.48■■□□□ 1.03
MUC1-204ENST00000343256 OTOP2Q7RTS6 562 aa21.48■■□□□ 1.03
MUC1-204ENST00000343256 TRMT2AQ8IZ69 625 aaKnown RBP21.48■■□□□ 1.03
MUC1-204ENST00000343256 DYNLL2Q96FJ2 89 aa21.48■■□□□ 1.03
MUC1-204ENST00000343256 ADAMTS5Q9UNA0 930 aa21.48■■□□□ 1.03
MUC1-204ENST00000343256 MAGEB6P1A0A0J9YX57 407 aa21.47■■□□□ 1.03
MUC1-204ENST00000343256 A0A0U1RQG5 324 aaPredicted RBP21.47■■□□□ 1.03
MUC1-204ENST00000343256 DUSP11O75319 330 aaKnown RBP21.47■■□□□ 1.03
MUC1-204ENST00000343256 SURF6O75683 361 aaKnown RBP21.47■■□□□ 1.03
MUC1-204ENST00000343256 FGBP02675 491 aa21.47■■□□□ 1.03
MUC1-204ENST00000343256 POLA2Q14181 598 aa21.47■■□□□ 1.03
MUC1-204ENST00000343256 PPP2R2DQ66LE6 453 aa21.47■■□□□ 1.03
MUC1-204ENST00000343256 SDR42E1Q8WUS8 393 aa21.47■■□□□ 1.03
MUC1-204ENST00000343256 UMODL1Q5DID0 1318 aa21.47■■□□□ 1.03
MUC1-204ENST00000343256 VWA5AO00534 786 aa21.46■■□□□ 1.03
MUC1-204ENST00000343256 TLR3O15455 904 aaKnown RBP21.46■■□□□ 1.03
MUC1-204ENST00000343256 CST5P28325 142 aaPredicted RBP21.46■■□□□ 1.03
MUC1-204ENST00000343256 RARSP54136 660 aaKnown RBP21.46■■□□□ 1.03
MUC1-204ENST00000343256 ARHGAP45Q92619 1136 aa21.46■■□□□ 1.03
MUC1-204ENST00000343256 EAF2Q96CJ1 260 aaPredicted RBP21.46■■□□□ 1.03
MUC1-204ENST00000343256 MTIF3Q9H2K0 278 aaKnown RBP21.46■■□□□ 1.03
MUC1-204ENST00000343256 ZNF214Q9UL59 606 aaPredicted RBP21.46■■□□□ 1.03
MUC1-204ENST00000343256 MYH8P13535 1937 aa21.46■■□□□ 1.03
MUC1-204ENST00000343256 RFXAPO00287 272 aa21.45■■□□□ 1.02
MUC1-204ENST00000343256 BCAR3O75815 825 aa21.45■■□□□ 1.02
MUC1-204ENST00000343256 CT47B1P0C2W7 299 aaPredicted RBP21.45■■□□□ 1.02
MUC1-204ENST00000343256 AAK1Q2M2I8 961 aa21.45■■□□□ 1.02
MUC1-204ENST00000343256 PCSK9Q8NBP7 692 aaKnown RBP21.45■■□□□ 1.02
MUC1-204ENST00000343256 REPS2Q8NFH8 660 aa21.45■■□□□ 1.02
MUC1-204ENST00000343256 SH2D4AQ9H788 454 aa21.45■■□□□ 1.02
MUC1-204ENST00000343256 ARIH1Q9Y4X5 557 aaPredicted RBP21.45■■□□□ 1.02
MUC1-204ENST00000343256 SMIM22K7EJ46 135 aa21.44■■□□□ 1.02
MUC1-204ENST00000343256 RAD21O60216 631 aa21.44■■□□□ 1.02
MUC1-204ENST00000343256 CD4P01730 458 aa21.44■■□□□ 1.02
MUC1-204ENST00000343256 CCL23P55773 120 aa21.44■■□□□ 1.02
MUC1-204ENST00000343256 TMEM31Q5JXX7 168 aa21.44■■□□□ 1.02
MUC1-204ENST00000343256 CRNKL1Q9BZJ0 848 aaKnown RBP21.44■■□□□ 1.02
MUC1-204ENST00000343256 PPP1R9AQ9ULJ8 1098 aa21.44■■□□□ 1.02
MUC1-204ENST00000343256 PRRC2BQ5JSZ5 2229 aaKnown RBP21.44■■□□□ 1.02
MUC1-204ENST00000343256 FAM86C2PA6NEL3 165 aa21.43■■□□□ 1.02
MUC1-204ENST00000343256 ERC2O15083 957 aa21.43■■□□□ 1.02
MUC1-204ENST00000343256 ACVR2BQ13705 512 aa21.43■■□□□ 1.02
MUC1-204ENST00000343256 GNASQ5JWF2 1037 aa21.43■■□□□ 1.02
MUC1-204ENST00000343256 MSL3Q8N5Y2 521 aaKnown RBP21.43■■□□□ 1.02
MUC1-204ENST00000343256 KHSRPQ92945 711 aaKnown RBP eCLIP21.43■■□□□ 1.02
MUC1-204ENST00000343256 CLUAP1Q96AJ1 413 aa21.43■■□□□ 1.02
MUC1-204ENST00000343256 DDX11Q96FC9 970 aa21.43■■□□□ 1.02
MUC1-204ENST00000343256 HIPK3Q9H422 1215 aa21.43■■□□□ 1.02
MUC1-204ENST00000343256 SPC25Q9HBM1 224 aa21.43■■□□□ 1.02
MUC1-204ENST00000343256 DCP1AQ9NPI6 582 aaPredicted RBP21.43■■□□□ 1.02
MUC1-204ENST00000343256 MCM3APO60318 1980 aa21.43■■□□□ 1.02
MUC1-204ENST00000343256 EEF2P13639 858 aaKnown RBP21.42■■□□□ 1.02
MUC1-204ENST00000343256 TRIM27P14373 513 aa21.42■■□□□ 1.02
MUC1-204ENST00000343256 SLC4A3P48751 1232 aa21.42■■□□□ 1.02
MUC1-204ENST00000343256 GJA9P57773 515 aa21.42■■□□□ 1.02
MUC1-204ENST00000343256 BEX3Q00994 111 aa21.42■■□□□ 1.02
MUC1-204ENST00000343256 CCDC144BQ3MJ40 725 aa21.42■■□□□ 1.02
MUC1-204ENST00000343256 FAM83BQ5T0W9 1011 aa21.42■■□□□ 1.02
MUC1-204ENST00000343256 MAMDC4Q6UXC1 1216 aa21.42■■□□□ 1.02
MUC1-204ENST00000343256 SSH3Q8TE77 659 aa21.42■■□□□ 1.02
MUC1-204ENST00000343256 UPF3AQ9H1J1 476 aaKnown RBP21.42■■□□□ 1.02
MUC1-204ENST00000343256 CERS4Q9HA82 394 aa21.42■■□□□ 1.02
MUC1-204ENST00000343256 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.42■■□□□ 1.02
MUC1-204ENST00000343256 SWAP70Q9UH65 585 aa21.42■■□□□ 1.02
MUC1-204ENST00000343256 RIPK3Q9Y572 518 aa21.42■■□□□ 1.02
MUC1-204ENST00000343256 COPB2P35606 906 aa21.41■■□□□ 1.02
MUC1-204ENST00000343256 KRT40Q6A162 431 aa21.41■■□□□ 1.02
MUC1-204ENST00000343256 LCORLQ8N3X6 602 aa21.41■■□□□ 1.02
MUC1-204ENST00000343256 C1orf115Q9H7X2 142 aa21.41■■□□□ 1.02
MUC1-204ENST00000343256 C11orf16Q9NQ32 467 aa21.41■■□□□ 1.02
MUC1-204ENST00000343256 MTCH2Q9Y6C9 303 aa21.41■■□□□ 1.02
MUC1-204ENST00000343256 SLC4A7Q9Y6M7 1214 aa21.41■■□□□ 1.02
MUC1-204ENST00000343256 LRRC37A2A6NM11 1700 aa21.41■■□□□ 1.02
MUC1-204ENST00000343256 DNAJC25-GNG10A0A024R161 153 aa21.4■■□□□ 1.02
MUC1-204ENST00000343256 ZBBXA8MT70 800 aa21.4■■□□□ 1.02
MUC1-204ENST00000343256 CTAGE5O15320 804 aa21.4■■□□□ 1.02
MUC1-204ENST00000343256 PDE6AP16499 860 aa21.4■■□□□ 1.02
MUC1-204ENST00000343256 ATP8B2P98198 1209 aa21.4■■□□□ 1.02
MUC1-204ENST00000343256 SNRNP48Q6IEG0 339 aaKnown RBP21.4■■□□□ 1.02
MUC1-204ENST00000343256 ALYREFQ86V81 257 aaKnown RBP21.4■■□□□ 1.02
MUC1-204ENST00000343256 PCDHA11Q9Y5I1 949 aa21.4■■□□□ 1.02
MUC1-204ENST00000343256 CYP2D7A0A087X1C5 515 aa21.39■■□□□ 1.01
MUC1-204ENST00000343256 SLC9C2Q5TAH2 1124 aa21.39■■□□□ 1.01
MUC1-204ENST00000343256 CXCL17Q6UXB2 119 aa21.39■■□□□ 1.01
MUC1-204ENST00000343256 WNT8AQ9H1J5 351 aa21.39■■□□□ 1.01
MUC1-204ENST00000343256 ZNF532Q9HCE3 1301 aa21.38■■□□□ 1.01
MUC1-204ENST00000343256 BAZ2AQ9UIF9 1905 aaKnown RBP21.38■■□□□ 1.01
MUC1-204ENST00000343256 EPOPA6NHQ4 379 aa21.38■■□□□ 1.01
MUC1-204ENST00000343256 PRKAB2O43741 272 aa21.38■■□□□ 1.01
MUC1-204ENST00000343256 TLL1O43897 1013 aa21.38■■□□□ 1.01
MUC1-204ENST00000343256 FRAT1Q92837 279 aaPredicted RBP21.38■■□□□ 1.01
MUC1-204ENST00000343256 SCLYQ96I15 445 aa21.38■■□□□ 1.01
MUC1-204ENST00000343256 FGD4Q96M96 766 aa21.38■■□□□ 1.01
MUC1-204ENST00000343256 NUP88Q99567 741 aaPredicted RBP21.38■■□□□ 1.01
MUC1-204ENST00000343256 TEX13BQ9BXU2 312 aa21.38■■□□□ 1.01
MUC1-204ENST00000343256 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms