RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 HNRNPH2P55795 449 aaKnown RBP27.06■■□□□ 1.92
NELFB-201ENST00000343053 HEATR3Q7Z4Q2 680 aa27.06■■□□□ 1.92
NELFB-201ENST00000343053 IRF2BP1Q8IU81 584 aa27.06■■□□□ 1.92
NELFB-201ENST00000343053 NOA1Q8NC60 698 aaKnown RBP27.06■■□□□ 1.92
NELFB-201ENST00000343053 ANKRD20A12PQ8NF67 263 aa27.06■■□□□ 1.92
NELFB-201ENST00000343053 NAPGQ99747 312 aaPredicted RBP27.06■■□□□ 1.92
NELFB-201ENST00000343053 UBXN6Q9BZV1 441 aa27.06■■□□□ 1.92
NELFB-201ENST00000343053 HDAC6Q9UBN7 1215 aa27.06■■□□□ 1.92
NELFB-201ENST00000343053 TTF2Q9UNY4 1162 aaKnown RBP27.06■■□□□ 1.92
NELFB-201ENST00000343053 PARP1P09874 1014 aaKnown RBP27.06■■□□□ 1.92
NELFB-201ENST00000343053 CYP26C1Q6V0L0 522 aa27.06■■□□□ 1.92
NELFB-201ENST00000343053 TMTC1Q8IUR5 882 aa27.06■■□□□ 1.92
NELFB-201ENST00000343053 DLEC1Q9Y238 1755 aa27.06■■□□□ 1.92
NELFB-201ENST00000343053 ITIH6Q6UXX5 1313 aa27.06■■□□□ 1.92
NELFB-201ENST00000343053 COL14A1Q05707 1796 aaKnown RBP27.05■■□□□ 1.92
NELFB-201ENST00000343053 NAALADL2Q58DX5 795 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 CT47A1Q5JQC4 288 aaPredicted RBP27.05■■□□□ 1.92
NELFB-201ENST00000343053 JAKMIP3Q5VZ66 844 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 PNMA1Q8ND90 353 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 LRRC15Q8TF66 581 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 PDE11AQ9HCR9 933 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 IL17RBQ9NRM6 502 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 LAMB2P55268 1798 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 CCDC151A5D8V7 595 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 ORC4O43929 436 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 HIBADHP31937 336 aaKnown RBP27.05■■□□□ 1.92
NELFB-201ENST00000343053 CEP112Q8N8E3 955 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 C4orf32Q8N8J7 132 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 LINC00116Q8NCU8 138 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 ABCB6Q9NP58 842 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 DISC1Q9NRI5 854 aa27.05■■□□□ 1.92
NELFB-201ENST00000343053 SRP68Q9UHB9 627 aaKnown RBP27.05■■□□□ 1.92
NELFB-201ENST00000343053 REXO2Q9Y3B8 237 aaKnown RBP27.05■■□□□ 1.92
NELFB-201ENST00000343053 N4BP1O75113 896 aaKnown RBP27.04■■□□□ 1.92
NELFB-201ENST00000343053 VSNL1P62760 191 aa27.04■■□□□ 1.92
NELFB-201ENST00000343053 CASZ1Q86V15 1759 aa27.04■■□□□ 1.92
NELFB-201ENST00000343053 CCDC194A0A1B0GVG4 234 aa27.04■■□□□ 1.92
NELFB-201ENST00000343053 KLK7P49862 253 aa27.04■■□□□ 1.92
NELFB-201ENST00000343053 SLC35G1Q2M3R5 365 aa27.04■■□□□ 1.92
NELFB-201ENST00000343053 FBXO33Q7Z6M2 555 aa27.04■■□□□ 1.92
NELFB-201ENST00000343053 DZIP1Q86YF9 867 aaKnown RBP27.04■■□□□ 1.92
NELFB-201ENST00000343053 TRIM47Q96LD4 638 aa27.04■■□□□ 1.92
NELFB-201ENST00000343053 CCDC51Q96ER9 411 aa27.03■■□□□ 1.92
NELFB-201ENST00000343053 STX8Q9UNK0 236 aa27.03■■□□□ 1.92
NELFB-201ENST00000343053 SF3B3Q15393 1217 aaKnown RBP27.03■■□□□ 1.92
NELFB-201ENST00000343053 DIXDC1Q155Q3 683 aa27.03■■□□□ 1.92
NELFB-201ENST00000343053 ATP8B1O43520 1251 aa27.02■■□□□ 1.92
NELFB-201ENST00000343053 SRGAP2O75044 1071 aa27.02■■□□□ 1.92
NELFB-201ENST00000343053 DTHD1Q6ZMT9 781 aa27.02■■□□□ 1.92
NELFB-201ENST00000343053 GPR101Q96P66 508 aaPredicted RBP27.02■■□□□ 1.92
NELFB-201ENST00000343053 PCDHA4Q9UN74 947 aa27.02■■□□□ 1.92
NELFB-201ENST00000343053 B4DLN1 442 aa27.02■■□□□ 1.92
NELFB-201ENST00000343053 USP5P45974 858 aa27.02■■□□□ 1.92
NELFB-201ENST00000343053 TRAPPC10P48553 1259 aa27.02■■□□□ 1.92
NELFB-201ENST00000343053 RPS8P62241 208 aaKnown RBP27.02■■□□□ 1.92
NELFB-201ENST00000343053 BEND6Q5SZJ8 279 aaPredicted RBP27.02■■□□□ 1.92
NELFB-201ENST00000343053 SAP30BPQ9UHR5 308 aaKnown RBP27.02■■□□□ 1.92
NELFB-201ENST00000343053 COL16A1Q07092 1604 aaPredicted RBP27.01■■□□□ 1.91
NELFB-201ENST00000343053 LRRC10BA6NIK2 292 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 NKRFO15226 690 aaKnown RBP eCLIP27.01■■□□□ 1.91
NELFB-201ENST00000343053 NDUFA10O95299 355 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 KIF5BP33176 963 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 LONP1P36776 959 aaKnown RBP27.01■■□□□ 1.91
NELFB-201ENST00000343053 SPAG1Q07617 926 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 RMND1Q9NWS8 449 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 ARPP21Q9UBL0 812 aaPredicted RBP27.01■■□□□ 1.91
NELFB-201ENST00000343053 EPN1Q9Y6I3 576 aaPredicted RBP27.01■■□□□ 1.91
NELFB-201ENST00000343053 CTAGE15A4D2H0 777 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 NUTM2BA6NNL0 878 aaPredicted RBP27.01■■□□□ 1.91
NELFB-201ENST00000343053 NUTM2EB1AL46 878 aaPredicted RBP27.01■■□□□ 1.91
NELFB-201ENST00000343053 PHACTR2O75167 634 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 CTAGE8P0CG41 777 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 UBA7P41226 1012 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 LMAN1P49257 510 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 BRD3Q15059 726 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 PTF1AQ7RTS3 328 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 CTAGE6Q86UF2 777 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 CTAGE4Q8IX94 777 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 ADSSL1Q8N142 457 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 HPS3Q969F9 1004 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 CAPZA3Q96KX2 299 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 ATP8A2Q9NTI2 1148 aa27.01■■□□□ 1.91
NELFB-201ENST00000343053 CYTH3O43739 400 aa27■■□□□ 1.91
NELFB-201ENST00000343053 ZFP91Q96JP5 570 aaPredicted RBP27■■□□□ 1.91
NELFB-201ENST00000343053 MKNK2Q9HBH9 465 aa27■■□□□ 1.91
NELFB-201ENST00000343053 VPS18Q9P253 973 aa27■■□□□ 1.91
NELFB-201ENST00000343053 PCP11498 1178 aaKnown RBP27■■□□□ 1.91
NELFB-201ENST00000343053 FECHP22830 423 aa27■■□□□ 1.91
NELFB-201ENST00000343053 GRIK5Q16478 980 aa27■■□□□ 1.91
NELFB-201ENST00000343053 MB21D1Q8N884 522 aa27■■□□□ 1.91
NELFB-201ENST00000343053 SH3RF3Q8TEJ3 882 aaPredicted RBP27■■□□□ 1.91
NELFB-201ENST00000343053 PCDHA6Q9UN73 950 aa27■■□□□ 1.91
NELFB-201ENST00000343053 PCDHA8Q9Y5H6 950 aa27■■□□□ 1.91
NELFB-201ENST00000343053 SPATA31A1Q5TZJ5 1347 aa27■■□□□ 1.91
NELFB-201ENST00000343053 LAMB1P07942 1786 aa27■■□□□ 1.91
NELFB-201ENST00000343053 CALML3P27482 149 aa26.99■■□□□ 1.91
NELFB-201ENST00000343053 TAF3Q5VWG9 929 aa26.99■■□□□ 1.91
NELFB-201ENST00000343053 AGPAT5Q9NUQ2 364 aa26.99■■□□□ 1.91
NELFB-201ENST00000343053 CCDC178Q5BJE1 867 aa26.99■■□□□ 1.91
NELFB-201ENST00000343053 MYO6Q9UM54 1294 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms