RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 ZNF446Q9NWS9 450 aa13.08□□□□□ -0.31
TRAK1-202ENST00000341421 KIF28PB7ZC32 967 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 RPN1P04843 607 aaKnown RBP13.08□□□□□ -0.32
TRAK1-202ENST00000341421 GUCY2CP25092 1073 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 CASP7P55210 303 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 CLEC4GQ6UXB4 293 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 JAKMIP2Q96AA8 810 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 DESI2Q9BSY9 194 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 JAG2Q9Y219 1238 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
TRAK1-202ENST00000341421 HAUS4Q9H6D7 363 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 PIK3C2AO00443 1686 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 OPA1O60313 960 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
TRAK1-202ENST00000341421 TCERG1LQ5VWI1 586 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 SHC4Q6S5L8 630 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 CCDC65Q8IXS2 484 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 ZNF622Q969S3 477 aaKnown RBP eCLIP13.07□□□□□ -0.321e-7■■■□□ 15.3
TRAK1-202ENST00000341421 SLF1Q9BQI6 1058 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 LRWD1Q9UFC0 647 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 HSF2BPO75031 334 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 CCDC172P0C7W6 258 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 IBSPP21815 317 aaPredicted RBP13.07□□□□□ -0.32
TRAK1-202ENST00000341421 ANTXR2P58335 489 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 ARL6IP4Q66PJ3 421 aaKnown RBP13.07□□□□□ -0.32
TRAK1-202ENST00000341421 TUBE1Q9UJT0 475 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 CCNL1Q9UK58 526 aaPredicted RBP13.07□□□□□ -0.32
TRAK1-202ENST00000341421 GSG1L2A8MUP6 293 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 PPFIA4O75335 1185 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 COPB1P53618 953 aaKnown RBP13.07□□□□□ -0.32
TRAK1-202ENST00000341421 CETN1Q12798 172 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
TRAK1-202ENST00000341421 RBM17Q96I25 401 aaKnown RBP13.07□□□□□ -0.32
TRAK1-202ENST00000341421 FAM204AQ9H8W3 233 aa13.07□□□□□ -0.32
TRAK1-202ENST00000341421 BSDC1Q9NW68 430 aaPredicted RBP13.07□□□□□ -0.32
TRAK1-202ENST00000341421 RIMS1Q86UR5 1692 aaKnown RBP13.07□□□□□ -0.32
TRAK1-202ENST00000341421 EEF1GP26641 437 aaKnown RBP13.06□□□□□ -0.32
TRAK1-202ENST00000341421 ARMCX5Q6P1M9 558 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 SAP30BPQ9UHR5 308 aaKnown RBP13.06□□□□□ -0.32
TRAK1-202ENST00000341421 CDC23Q9UJX2 597 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 GGA1Q9UJY5 639 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
TRAK1-202ENST00000341421 UFL1O94874 794 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 LIG3P49916 1009 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 PICALMQ13492 652 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 B4GALNT4Q76KP1 1039 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 TADA2BQ86TJ2 420 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 ZC3H12CQ9C0D7 883 aaKnown RBP13.06□□□□□ -0.32
TRAK1-202ENST00000341421 FMN2Q9NZ56 1722 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.323e-8■■■■■ 29.8
TRAK1-202ENST00000341421 NOP2P46087 812 aaKnown RBP13.06□□□□□ -0.32
TRAK1-202ENST00000341421 IGDCC4Q8TDY8 1250 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 AK8Q96MA6 479 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 PLCD4Q9BRC7 762 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 RWDD2AQ9UIY3 292 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 PCDHA4Q9UN74 947 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 ZNF804BA4D1E1 1349 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 ADCY7P51828 1080 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 ZNF658Q5TYW1 1059 aaPredicted RBP13.06□□□□□ -0.32
TRAK1-202ENST00000341421 ELOA2Q8IYF1 753 aaPredicted RBP13.06□□□□□ -0.32
TRAK1-202ENST00000341421 PAGE5Q96GU1 130 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 CAPZA3Q96KX2 299 aa13.06□□□□□ -0.32
TRAK1-202ENST00000341421 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
TRAK1-202ENST00000341421 OR52Z1P0C646 297 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 SECISBP2LQ93073 1101 aaKnown RBP13.05□□□□□ -0.32
TRAK1-202ENST00000341421 NUCKS1Q9H1E3 243 aaKnown RBP13.05□□□□□ -0.32
TRAK1-202ENST00000341421 EPC1Q9H2F5 836 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 SAMSN1Q9NSI8 373 aaKnown RBP13.05□□□□□ -0.32
TRAK1-202ENST00000341421 GOLGA6CA6NDK9 693 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 TBC1D8O95759 1140 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 GOLGA6DP0CG33 693 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 TXKP42681 527 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 TMTC3Q6ZXV5 915 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 TGFBRAP1Q8WUH2 860 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 SELENOOQ9BVL4 669 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 GOLGA6AQ9NYA3 693 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 LMTK3Q96Q04 1460 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 SMCO2A6NFE2 343 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 NEFHP12036 1026 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 CASP14P31944 242 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 DYNLL1P63167 89 aaKnown RBP13.05□□□□□ -0.32
TRAK1-202ENST00000341421 HPS5Q9UPZ3 1129 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 HLTFQ14527 1009 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAK1-202ENST00000341421 CALCRLQ16602 461 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 VWA3BQ502W6 1294 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 GRAMD1CQ8IYS0 662 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 LMBR1Q8WVP7 490 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 EYA3Q99504 573 aa13.05□□□□□ -0.32
TRAK1-202ENST00000341421 HOXA7P31268 230 aaPredicted RBP13.04□□□□□ -0.32
TRAK1-202ENST00000341421 VAV2P52735 878 aa13.04□□□□□ -0.32
TRAK1-202ENST00000341421 NEK8Q86SG6 692 aa13.04□□□□□ -0.32
TRAK1-202ENST00000341421 MAPKAPK5Q8IW41 473 aa13.04□□□□□ -0.32
TRAK1-202ENST00000341421 RETREG2Q8NC44 543 aa13.04□□□□□ -0.32
TRAK1-202ENST00000341421 SAR1BQ9Y6B6 198 aa13.04□□□□□ -0.32
TRAK1-202ENST00000341421 STK24Q9Y6E0 443 aa13.04□□□□□ -0.32
TRAK1-202ENST00000341421 EPN1Q9Y6I3 576 aaPredicted RBP13.04□□□□□ -0.32
TRAK1-202ENST00000341421 A6NNZ2 444 aa13.04□□□□□ -0.32
TRAK1-202ENST00000341421 TMCO5BA8MYB1 307 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms