RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 MB21D1Q8N884 522 aa23.25■■□□□ 1.31
CLPB-202ENST00000340729 ZNF507Q8TCN5 953 aa23.25■■□□□ 1.31
CLPB-202ENST00000340729 AFAP1L1Q8TED9 768 aa23.25■■□□□ 1.31
CLPB-202ENST00000340729 HPCAL4Q9UM19 191 aa23.25■■□□□ 1.31
CLPB-202ENST00000340729 LUC7L2Q9Y383 392 aaKnown RBP23.25■■□□□ 1.31
CLPB-202ENST00000340729 ZC3H4Q9UPT8 1303 aaKnown RBP23.25■■□□□ 1.31
CLPB-202ENST00000340729 TTC26A0AVF1 554 aa23.24■■□□□ 1.31
CLPB-202ENST00000340729 PRDM1O75626 825 aa23.24■■□□□ 1.31
CLPB-202ENST00000340729 FGRP09769 529 aa23.24■■□□□ 1.31
CLPB-202ENST00000340729 TMTC3Q6ZXV5 915 aa23.24■■□□□ 1.31
CLPB-202ENST00000340729 IRF2BP1Q8IU81 584 aa23.24■■□□□ 1.31
CLPB-202ENST00000340729 IPO4Q8TEX9 1081 aaKnown RBP23.24■■□□□ 1.31
CLPB-202ENST00000340729 COG1Q8WTW3 980 aa23.24■■□□□ 1.31
CLPB-202ENST00000340729 RREB1Q92766 1687 aa23.24■■□□□ 1.31
CLPB-202ENST00000340729 ANO9A1A5B4 782 aa23.24■■□□□ 1.31
CLPB-202ENST00000340729 PPFIA4O75335 1185 aa23.24■■□□□ 1.31
CLPB-202ENST00000340729 PLEKHA8P1O95397 391 aa23.24■■□□□ 1.31
CLPB-202ENST00000340729 PARP1P09874 1014 aaKnown RBP23.24■■□□□ 1.31
CLPB-202ENST00000340729 LONP1P36776 959 aaKnown RBP23.24■■□□□ 1.31
CLPB-202ENST00000340729 TNNT3P45378 269 aaPredicted RBP23.24■■□□□ 1.31
CLPB-202ENST00000340729 HERVK_113P62684 666 aa23.24■■□□□ 1.31
CLPB-202ENST00000340729 IFIT1BQ5T764 474 aaKnown RBP23.24■■□□□ 1.31
CLPB-202ENST00000340729 PDS5AQ29RF7 1337 aaKnown RBP23.24■■□□□ 1.31
CLPB-202ENST00000340729 EXOC5O00471 708 aa23.23■■□□□ 1.31
CLPB-202ENST00000340729 ZNF34Q8IZ26 560 aa23.23■■□□□ 1.31
CLPB-202ENST00000340729 ADSSL1Q8N142 457 aa23.23■■□□□ 1.31
CLPB-202ENST00000340729 STAMQ92783 540 aa23.23■■□□□ 1.31
CLPB-202ENST00000340729 THAP9Q9H5L6 903 aa23.23■■□□□ 1.31
CLPB-202ENST00000340729 CNTNAP5Q8WYK1 1306 aa23.23■■□□□ 1.31
CLPB-202ENST00000340729 PRCPP42785 496 aa23.23■■□□□ 1.31
CLPB-202ENST00000340729 TSR1Q2NL82 804 aaKnown RBP23.23■■□□□ 1.31
CLPB-202ENST00000340729 MMS19Q96T76 1030 aa23.23■■□□□ 1.31
CLPB-202ENST00000340729 KRT86O43790 486 aa23.22■■□□□ 1.31
CLPB-202ENST00000340729 ATP1A1P05023 1023 aaKnown RBP23.22■■□□□ 1.31
CLPB-202ENST00000340729 MYL1P05976 194 aa23.22■■□□□ 1.31
CLPB-202ENST00000340729 NOP2P46087 812 aaKnown RBP23.22■■□□□ 1.31
CLPB-202ENST00000340729 CORO7P57737 925 aa23.22■■□□□ 1.31
CLPB-202ENST00000340729 KCNB1Q14721 858 aa23.22■■□□□ 1.31
CLPB-202ENST00000340729 FOXR1Q6PIV2 292 aa23.22■■□□□ 1.31
CLPB-202ENST00000340729 WDR59Q6PJI9 974 aa23.22■■□□□ 1.31
CLPB-202ENST00000340729 MIGA1Q8NAN2 632 aa23.22■■□□□ 1.31
CLPB-202ENST00000340729 RUBCNQ92622 972 aa23.22■■□□□ 1.31
CLPB-202ENST00000340729 CYP19A1P11511 503 aaPredicted RBP23.21■■□□□ 1.31
CLPB-202ENST00000340729 IL17AQ16552 155 aa23.21■■□□□ 1.31
CLPB-202ENST00000340729 CCDC122Q5T0U0 273 aa23.21■■□□□ 1.31
CLPB-202ENST00000340729 IQCA1Q86XH1 822 aa23.21■■□□□ 1.31
CLPB-202ENST00000340729 RETREG2Q8NC44 543 aa23.21■■□□□ 1.31
CLPB-202ENST00000340729 NOC3LQ8WTT2 800 aaKnown RBP23.21■■□□□ 1.31
CLPB-202ENST00000340729 LRP2BPQ9P2M1 347 aa23.21■■□□□ 1.31
CLPB-202ENST00000340729 TRIM10Q9UDY6 481 aa23.21■■□□□ 1.31
CLPB-202ENST00000340729 MINDY4BA8MYZ0 360 aa23.21■■□□□ 1.31
CLPB-202ENST00000340729 EIF3CLB5ME19 914 aaKnown RBP23.21■■□□□ 1.31
CLPB-202ENST00000340729 COBLO75128 1261 aa23.21■■□□□ 1.31
CLPB-202ENST00000340729 PHACTR2O75167 634 aa23.21■■□□□ 1.31
CLPB-202ENST00000340729 CCDC170Q8IYT3 715 aa23.21■■□□□ 1.31
CLPB-202ENST00000340729 EIF3CQ99613 913 aaKnown RBP23.21■■□□□ 1.31
CLPB-202ENST00000340729 SPATA31A1Q5TZJ5 1347 aa23.21■■□□□ 1.31
CLPB-202ENST00000340729 SHOX2O60902 331 aaPredicted RBP23.2■■□□□ 1.3
CLPB-202ENST00000340729 CYP7A1P22680 504 aa23.2■■□□□ 1.3
CLPB-202ENST00000340729 CYLC1P35663 651 aaPredicted RBP23.2■■□□□ 1.3
CLPB-202ENST00000340729 DNM2P50570 870 aa23.2■■□□□ 1.3
CLPB-202ENST00000340729 STIM1Q13586 685 aa23.2■■□□□ 1.3
CLPB-202ENST00000340729 PURBQ96QR8 312 aaKnown RBP23.2■■□□□ 1.3
CLPB-202ENST00000340729 NUP58Q9BVL2 599 aa23.2■■□□□ 1.3
CLPB-202ENST00000340729 BRIP1Q9BX63 1249 aa23.2■■□□□ 1.3
CLPB-202ENST00000340729 MAGEB6P1A0A0J9YX57 407 aa23.2■■□□□ 1.3
CLPB-202ENST00000340729 BCAMP50895 628 aa23.2■■□□□ 1.3
CLPB-202ENST00000340729 IQCEQ6IPM2 695 aa23.2■■□□□ 1.3
CLPB-202ENST00000340729 TTYH3Q9C0H2 523 aa23.2■■□□□ 1.3
CLPB-202ENST00000340729 GDAQ9Y2T3 454 aa23.2■■□□□ 1.3
CLPB-202ENST00000340729 SLIT2O94813 1529 aa23.19■■□□□ 1.3
CLPB-202ENST00000340729 HDAC6Q9UBN7 1215 aa23.19■■□□□ 1.3
CLPB-202ENST00000340729 hCG_1642624A0A1W2PR95 340 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 ENC1O14682 589 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 SRGNP10124 158 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 CDK17Q00537 523 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 ITIH3Q06033 890 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 TMED8Q6PL24 325 aaPredicted RBP23.18■■□□□ 1.3
CLPB-202ENST00000340729 CCNI2Q6ZMN8 369 aaPredicted RBP23.18■■□□□ 1.3
CLPB-202ENST00000340729 C4orf32Q8N8J7 132 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 SDR42E1Q8WUS8 393 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 JAKMIP2Q96AA8 810 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 RIOK1Q9BRS2 568 aaKnown RBP23.18■■□□□ 1.3
CLPB-202ENST00000340729 SCG2P13521 617 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 PIK3AP1Q6ZUJ8 805 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 ADGRA1Q86SQ6 560 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 PPM1EQ8WY54 764 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 ZBTB1Q9Y2K1 713 aa23.18■■□□□ 1.3
CLPB-202ENST00000340729 NUTM2BA6NNL0 878 aaPredicted RBP23.17■■□□□ 1.3
CLPB-202ENST00000340729 NUTM2EB1AL46 878 aaPredicted RBP23.17■■□□□ 1.3
CLPB-202ENST00000340729 IL6STP40189 918 aaPredicted RBP23.17■■□□□ 1.3
CLPB-202ENST00000340729 ZNF572Q7Z3I7 529 aaPredicted RBP23.17■■□□□ 1.3
CLPB-202ENST00000340729 FNBP4Q8N3X1 1017 aaPredicted RBP23.17■■□□□ 1.3
CLPB-202ENST00000340729 DISC1Q9NRI5 854 aa23.17■■□□□ 1.3
CLPB-202ENST00000340729 ZNF804BA4D1E1 1349 aa23.17■■□□□ 1.3
CLPB-202ENST00000340729 SNAP23O00161 211 aa23.17■■□□□ 1.3
CLPB-202ENST00000340729 CPP00450 1065 aa23.17■■□□□ 1.3
CLPB-202ENST00000340729 STAT6P42226 847 aa23.17■■□□□ 1.3
CLPB-202ENST00000340729 NLRP5P59047 1200 aa23.17■■□□□ 1.3
CLPB-202ENST00000340729 PFKFB3Q16875 520 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms