RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 ADAMTS4O75173 837 aa16.55■□□□□ 0.24
UPK3BL1-201ENST00000340457 UBE3CQ15386 1083 aa16.55■□□□□ 0.24
UPK3BL1-201ENST00000340457 SNRNP48Q6IEG0 339 aaKnown RBP16.55■□□□□ 0.24
UPK3BL1-201ENST00000340457 ZHX1Q9UKY1 873 aaPredicted RBP16.55■□□□□ 0.24
UPK3BL1-201ENST00000340457 DIS3Q9Y2L1 958 aaKnown RBP16.55■□□□□ 0.24
UPK3BL1-201ENST00000340457 SYNRGQ9UMZ2 1314 aa16.55■□□□□ 0.24
UPK3BL1-201ENST00000340457 MYADML2A6NDP7 307 aa16.54■□□□□ 0.24
UPK3BL1-201ENST00000340457 SNAI1O95863 264 aaPredicted RBP16.54■□□□□ 0.24
UPK3BL1-201ENST00000340457 ACLYP53396 1101 aa16.54■□□□□ 0.24
UPK3BL1-201ENST00000340457 FPGSQ05932 587 aa16.54■□□□□ 0.24
UPK3BL1-201ENST00000340457 FAAP100Q0VG06 881 aa16.54■□□□□ 0.24
UPK3BL1-201ENST00000340457 CPXCR1Q8N123 301 aa16.54■□□□□ 0.24
UPK3BL1-201ENST00000340457 DDX11Q96FC9 970 aa16.54■□□□□ 0.24
UPK3BL1-201ENST00000340457 SLF1Q9BQI6 1058 aa16.54■□□□□ 0.24
UPK3BL1-201ENST00000340457 STARD7Q9NQZ5 370 aa16.54■□□□□ 0.24
UPK3BL1-201ENST00000340457 MCM3APO60318 1980 aa16.54■□□□□ 0.24
UPK3BL1-201ENST00000340457 MINDY4BA8MYZ0 360 aa16.53■□□□□ 0.24
UPK3BL1-201ENST00000340457 RASA1P20936 1047 aa16.53■□□□□ 0.24
UPK3BL1-201ENST00000340457 KCNA10Q16322 511 aa16.53■□□□□ 0.24
UPK3BL1-201ENST00000340457 TEX13BQ9BXU2 312 aa16.53■□□□□ 0.24
UPK3BL1-201ENST00000340457 DDX19BQ9UMR2 479 aa16.53■□□□□ 0.24
UPK3BL1-201ENST00000340457 DCDC2CA8MYV0 355 aa16.52■□□□□ 0.24
UPK3BL1-201ENST00000340457 F5H6K3 240 aa16.52■□□□□ 0.24
UPK3BL1-201ENST00000340457 NDUFB10O96000 172 aa16.52■□□□□ 0.24
UPK3BL1-201ENST00000340457 COPB2P35606 906 aa16.52■□□□□ 0.24
UPK3BL1-201ENST00000340457 KLRC3Q07444 240 aa16.52■□□□□ 0.24
UPK3BL1-201ENST00000340457 GRIN2CQ14957 1233 aa16.52■□□□□ 0.24
UPK3BL1-201ENST00000340457 STRBPQ96SI9 672 aaKnown RBP16.52■□□□□ 0.24
UPK3BL1-201ENST00000340457 MKNK2Q9HBH9 465 aa16.52■□□□□ 0.24
UPK3BL1-201ENST00000340457 FAM184BQ9ULE4 1060 aa16.52■□□□□ 0.24
UPK3BL1-201ENST00000340457 ROBO3Q96MS0 1386 aa16.52■□□□□ 0.23
UPK3BL1-201ENST00000340457 CHD9Q3L8U1 2897 aa16.52■□□□□ 0.23
UPK3BL1-201ENST00000340457 GSG1L2A8MUP6 293 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 ADCY6O43306 1168 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 PRDM1O75626 825 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 MS4A1P11836 297 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 DNAJB2P25686 324 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 ZSCAN25Q6NSZ9 544 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 ANKRD33Q7Z3H0 272 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 KLHDC9Q8NEP7 349 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 NUP133Q8WUM0 1156 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 KIFC2Q96AC6 838 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 VTI1AQ96AJ9 217 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 CHMP4CQ96CF2 233 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 TSEN34Q9BSV6 310 aaKnown RBP16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 RAVER2Q9HCJ3 691 aaKnown RBP16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 ARPP21Q9UBL0 812 aaPredicted RBP16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 CLIP2Q9UDT6 1046 aa16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 GREB1LQ9C091 1923 aaPredicted RBP16.51■□□□□ 0.23
UPK3BL1-201ENST00000340457 DNAJC25-GNG10A0A024R161 153 aa16.5■□□□□ 0.23
UPK3BL1-201ENST00000340457 C6orf222P0C671 652 aaPredicted RBP16.5■□□□□ 0.23
UPK3BL1-201ENST00000340457 TSHZ3Q63HK5 1081 aa16.5■□□□□ 0.23
UPK3BL1-201ENST00000340457 CCSAPQ6IQ19 270 aaPredicted RBP16.5■□□□□ 0.23
UPK3BL1-201ENST00000340457 PRPF38AQ8NAV1 312 aaKnown RBP16.5■□□□□ 0.23
UPK3BL1-201ENST00000340457 USP38Q8NB14 1042 aa16.5■□□□□ 0.23
UPK3BL1-201ENST00000340457 TOX2Q96NM4 488 aa16.5■□□□□ 0.23
UPK3BL1-201ENST00000340457 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.5■□□□□ 0.23
UPK3BL1-201ENST00000340457 NYAP2Q9P242 653 aa16.5■□□□□ 0.23
UPK3BL1-201ENST00000340457 CTDP1Q9Y5B0 961 aaPredicted RBP16.5■□□□□ 0.23
UPK3BL1-201ENST00000340457 SYNGAP1Q96PV0 1343 aa16.5■□□□□ 0.23
UPK3BL1-201ENST00000340457 MYH4Q9Y623 1939 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 GRXCR1A8MXD5 290 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 ZBED4O75132 1171 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 TIMP1P01033 207 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 ACVR2BQ13705 512 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 SBK1Q52WX2 424 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 MAMDC4Q6UXC1 1216 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 OSBP2Q969R2 916 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 FGD4Q96M96 766 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 LRRCC1Q9C099 1032 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 HOMER2Q9NSB8 354 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 TBX21Q9UL17 535 aa16.49■□□□□ 0.23
UPK3BL1-201ENST00000340457 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 MOXD2PA6NHM9 499 aa16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 DUSP11O75319 330 aaKnown RBP16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 ASGR1P07306 291 aa16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 CCDC144BQ3MJ40 725 aa16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 C16orf59Q7L2K0 433 aa16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 LRRC47Q8N1G4 583 aaKnown RBP16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 ANKRD35Q8N283 1001 aa16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 MSL3Q8N5Y2 521 aaKnown RBP16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 GLT1D1Q96MS3 346 aa16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 EPB41L4AQ9HCS5 686 aaPredicted RBP16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 MUC3AQ02505 3323 aa16.48■□□□□ 0.23
UPK3BL1-201ENST00000340457 TMEM265A0A087WTH1 108 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 ACRP10323 421 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 PBX2P40425 430 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 CNTN2Q02246 1040 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 GNASQ5JWF2 1037 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 C20orf194Q5TEA3 1177 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 ARMCX2Q7L311 632 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 PPM1EQ8WY54 764 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 TIFAQ96CG3 184 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 CEP95Q96GE4 821 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 PPP1R12CQ9BZL4 782 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 ZNF576Q9H609 170 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 SLC38A10Q9HBR0 1119 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 PRDM6Q9NQX0 595 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms