RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 TMEM232C9JQI7 657 aa17.24■□□□□ 0.35
ERCC1-203ENST00000340192 ZBED4O75132 1171 aa17.24■□□□□ 0.35
ERCC1-203ENST00000340192 TFRCP02786 760 aaKnown RBP17.24■□□□□ 0.35
ERCC1-203ENST00000340192 FCER1AP12319 257 aa17.24■□□□□ 0.35
ERCC1-203ENST00000340192 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
ERCC1-203ENST00000340192 RASGRP2Q7LDG7 609 aa17.24■□□□□ 0.35
ERCC1-203ENST00000340192 ABRAQ8N0Z2 381 aa17.24■□□□□ 0.35
ERCC1-203ENST00000340192 RUFY2Q8WXA3 655 aa17.24■□□□□ 0.35
ERCC1-203ENST00000340192 ESR2Q92731 530 aa17.24■□□□□ 0.35
ERCC1-203ENST00000340192 COBLO75128 1261 aa17.23■□□□□ 0.35
ERCC1-203ENST00000340192 TOP1P11387 765 aaKnown RBP17.23■□□□□ 0.35
ERCC1-203ENST00000340192 STAT2P52630 851 aa17.23■□□□□ 0.35
ERCC1-203ENST00000340192 IKQ13123 557 aaPredicted RBP17.23■□□□□ 0.35
ERCC1-203ENST00000340192 SNRNP48Q6IEG0 339 aaKnown RBP17.23■□□□□ 0.35
ERCC1-203ENST00000340192 KCTD1Q719H9 257 aa17.23■□□□□ 0.35
ERCC1-203ENST00000340192 SKAP1Q86WV1 359 aa17.23■□□□□ 0.35
ERCC1-203ENST00000340192 TMEM47Q9BQJ4 181 aa17.23■□□□□ 0.35
ERCC1-203ENST00000340192 TEX13BQ9BXU2 312 aa17.23■□□□□ 0.35
ERCC1-203ENST00000340192 CRISPLD2Q9H0B8 497 aa17.23■□□□□ 0.35
ERCC1-203ENST00000340192 SLC38A10Q9HBR0 1119 aa17.23■□□□□ 0.35
ERCC1-203ENST00000340192 MTMR7Q9Y216 660 aa17.23■□□□□ 0.35
ERCC1-203ENST00000340192 CTDP1Q9Y5B0 961 aaPredicted RBP17.23■□□□□ 0.35
ERCC1-203ENST00000340192 FRMPD3Q5JV73 1810 aa17.23■□□□□ 0.35
ERCC1-203ENST00000340192 ATP2A1O14983 1001 aa17.22■□□□□ 0.35
ERCC1-203ENST00000340192 COPB2P35606 906 aa17.22■□□□□ 0.35
ERCC1-203ENST00000340192 MFSD14CQ5VZR4 134 aa17.22■□□□□ 0.35
ERCC1-203ENST00000340192 RCSD1Q6JBY9 416 aa17.22■□□□□ 0.35
ERCC1-203ENST00000340192 UBE2Q1Q7Z7E8 422 aa17.22■□□□□ 0.35
ERCC1-203ENST00000340192 CPXCR1Q8N123 301 aa17.22■□□□□ 0.35
ERCC1-203ENST00000340192 CHURC1Q8WUH1 139 aa17.22■□□□□ 0.35
ERCC1-203ENST00000340192 MMP19Q99542 508 aa17.22■□□□□ 0.35
ERCC1-203ENST00000340192 ZKSCAN3Q9BRR0 538 aa17.22■□□□□ 0.35
ERCC1-203ENST00000340192 RAVER2Q9HCJ3 691 aaKnown RBP17.22■□□□□ 0.35
ERCC1-203ENST00000340192 SLC5A4Q9NY91 659 aa17.22■□□□□ 0.35
ERCC1-203ENST00000340192 RIPK3Q9Y572 518 aa17.22■□□□□ 0.35
ERCC1-203ENST00000340192 SGSM2O43147 1006 aa17.21■□□□□ 0.35
ERCC1-203ENST00000340192 KDM4AO75164 1064 aa17.21■□□□□ 0.35
ERCC1-203ENST00000340192 FARP2O94887 1054 aaPredicted RBP17.21■□□□□ 0.35
ERCC1-203ENST00000340192 IGHA2P01877 340 aa17.21■□□□□ 0.35
ERCC1-203ENST00000340192 CAPN2P17655 700 aa17.21■□□□□ 0.35
ERCC1-203ENST00000340192 CCND3P30281 292 aaPredicted RBP17.21■□□□□ 0.35
ERCC1-203ENST00000340192 CYP2C19P33261 490 aa17.21■□□□□ 0.35
ERCC1-203ENST00000340192 SLC4A3P48751 1232 aa17.21■□□□□ 0.35
ERCC1-203ENST00000340192 PTH1RQ03431 593 aa17.21■□□□□ 0.35
ERCC1-203ENST00000340192 OLFML2BQ68BL8 750 aa17.21■□□□□ 0.35
ERCC1-203ENST00000340192 FAM160B2Q86V87 743 aa17.21■□□□□ 0.35
ERCC1-203ENST00000340192 DCAF4Q8WV16 495 aa17.21■□□□□ 0.35
ERCC1-203ENST00000340192 TTC14Q96N46 770 aa17.21■□□□□ 0.35
ERCC1-203ENST00000340192 B4E1Z4 1266 aa17.2■□□□□ 0.34
ERCC1-203ENST00000340192 PLA2G6O60733 806 aa17.2■□□□□ 0.34
ERCC1-203ENST00000340192 PGK2P07205 417 aa17.2■□□□□ 0.34
ERCC1-203ENST00000340192 NT5C2P49902 561 aa17.2■□□□□ 0.34
ERCC1-203ENST00000340192 KCTD2Q14681 263 aa17.2■□□□□ 0.34
ERCC1-203ENST00000340192 CCDC96Q2M329 555 aa17.2■□□□□ 0.34
ERCC1-203ENST00000340192 FDX1P10109 184 aa17.19■□□□□ 0.34
ERCC1-203ENST00000340192 OAZ1P54368 228 aa17.19■□□□□ 0.34
ERCC1-203ENST00000340192 IQCA1Q86XH1 822 aa17.19■□□□□ 0.34
ERCC1-203ENST00000340192 MAML3Q96JK9 1138 aa17.19■□□□□ 0.34
ERCC1-203ENST00000340192 CCDC136Q96JN2 1154 aa17.19■□□□□ 0.34
ERCC1-203ENST00000340192 KRT23Q9C075 422 aa17.19■□□□□ 0.34
ERCC1-203ENST00000340192 CNNM2Q9H8M5 875 aa17.19■□□□□ 0.34
ERCC1-203ENST00000340192 ZSWIM5Q9P217 1185 aa17.19■□□□□ 0.34
ERCC1-203ENST00000340192 PDHBP11177 359 aa17.18■□□□□ 0.34
ERCC1-203ENST00000340192 SNAP25P60880 206 aa17.18■□□□□ 0.34
ERCC1-203ENST00000340192 PRPF38BQ5VTL8 546 aaKnown RBP17.18■□□□□ 0.34
ERCC1-203ENST00000340192 LHX8Q68G74 356 aa17.18■□□□□ 0.34
ERCC1-203ENST00000340192 DGKHQ86XP1 1220 aa17.18■□□□□ 0.34
ERCC1-203ENST00000340192 TRPV1Q8NER1 839 aa17.18■□□□□ 0.34
ERCC1-203ENST00000340192 ZSCAN10Q96SZ4 725 aaPredicted RBP17.18■□□□□ 0.34
ERCC1-203ENST00000340192 OGDHLQ9ULD0 1010 aa17.18■□□□□ 0.34
ERCC1-203ENST00000340192 PRR12Q9ULL5 1215 aa17.18■□□□□ 0.34
ERCC1-203ENST00000340192 U3KPZ7 1027 aaPredicted RBP17.18■□□□□ 0.34
ERCC1-203ENST00000340192 ZNF536O15090 1300 aa17.18■□□□□ 0.34
ERCC1-203ENST00000340192 FRMPD2Q68DX3 1309 aaPredicted RBP17.18■□□□□ 0.34
ERCC1-203ENST00000340192 CYP21A2P08686 494 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 CYBAP13498 195 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 CNGA1P29973 690 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 SLC16A2P36021 539 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 ZNF792Q3KQV3 632 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 CCDC178Q5BJE1 867 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 TTBK2Q6IQ55 1244 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 ANKLE1Q8NAG6 615 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 DIS3LQ8TF46 1054 aaKnown RBP17.17■□□□□ 0.34
ERCC1-203ENST00000340192 AGBL1Q96MI9 1066 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 GPCPD1Q9NPB8 672 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 HOMER2Q9NSB8 354 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 DNAH12Q6ZR08 3092 aa17.17■□□□□ 0.34
ERCC1-203ENST00000340192 BMP2KLQ5H9B9 411 aa17.16■□□□□ 0.34
ERCC1-203ENST00000340192 CCDC174Q6PII3 467 aa17.16■□□□□ 0.34
ERCC1-203ENST00000340192 BTNL9Q6UXG8 535 aa17.16■□□□□ 0.34
ERCC1-203ENST00000340192 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.16■□□□□ 0.34
ERCC1-203ENST00000340192 ENAHQ8N8S7 591 aaPredicted RBP17.16■□□□□ 0.34
ERCC1-203ENST00000340192 CHST13Q8NET6 341 aa17.16■□□□□ 0.34
ERCC1-203ENST00000340192 MAP4K1Q92918 833 aa17.16■□□□□ 0.34
ERCC1-203ENST00000340192 DDX11Q96FC9 970 aa17.16■□□□□ 0.34
ERCC1-203ENST00000340192 PAWRQ96IZ0 340 aaKnown RBP17.16■□□□□ 0.34
ERCC1-203ENST00000340192 FBXO40Q9UH90 709 aa17.16■□□□□ 0.34
ERCC1-203ENST00000340192 DIS3Q9Y2L1 958 aaKnown RBP17.16■□□□□ 0.34
ERCC1-203ENST00000340192 SMCHD1A6NHR9 2005 aa17.16■□□□□ 0.34
ERCC1-203ENST00000340192 TNKSO95271 1327 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms