RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 FAM83BQ5T0W9 1011 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 LDLRAD1Q5T700 205 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 WWC2Q6AWC2 1192 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 TYW1BQ6NUM6 668 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 PIBF1Q8WXW3 757 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 CHAMP1Q96JM3 812 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 VAT1LQ9HCJ6 419 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 BARHL2Q9NY43 387 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 KCNJ14Q9UNX9 436 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 RLFQ13129 1914 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 KIF28PB7ZC32 967 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 TMEM232C9JQI7 657 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 XBP1P17861 261 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 U2AF2P26368 475 aaKnown RBP eCLIP9.03□□□□□ -0.96
TMC1-202ENST00000340019 STAT2P52630 851 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 USP14P54578 494 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 DGKZQ13574 1117 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 FAM177A1Q8N128 213 aaPredicted RBP9.03□□□□□ -0.96
TMC1-202ENST00000340019 GPKOWQ92917 476 aaPredicted RBP eCLIP9.03□□□□□ -0.96
TMC1-202ENST00000340019 C12orf42Q96LP6 360 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 ATP6V1DQ9Y5K8 247 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 CSADQ9Y600 493 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 TRPM7Q96QT4 1865 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 PNMA6FA0A0J9YX94 578 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 UNCXA6NJT0 531 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 C19orf81C9J6K1 198 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 STXBP3O00186 592 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 ZBTB5O15062 677 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 WDR46O15213 610 aaKnown RBP9.03□□□□□ -0.96
TMC1-202ENST00000340019 PPP1R11O60927 126 aaPredicted RBP9.03□□□□□ -0.96
TMC1-202ENST00000340019 SYDE2Q5VT97 1194 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 ARMC9Q7Z3E5 817 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 HOMER1Q86YM7 354 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 CLMNQ96JQ2 1002 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 GBP4Q96PP9 640 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 SEC63Q9UGP8 760 aaKnown RBP9.03□□□□□ -0.96
TMC1-202ENST00000340019 LOC285556D6RIA3 1793 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 TRIM75PA6NK02 468 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 hCG_1984214I3L0E3 225 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 ITGBL1O95965 494 aaPredicted RBP9.03□□□□□ -0.96
TMC1-202ENST00000340019 VCAM1P19320 739 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 SH3D19Q5HYK7 790 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 ZNF713Q8N859 430 aaPredicted RBP9.03□□□□□ -0.96
TMC1-202ENST00000340019 PRR12Q9ULL5 1215 aa9.03□□□□□ -0.96
TMC1-202ENST00000340019 SPDYE5A6NIY4 337 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 FKBP1BP68106 108 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 PPATQ06203 517 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 TTLL12Q14166 644 aaPredicted RBP9.02□□□□□ -0.97
TMC1-202ENST00000340019 NFKBIBQ15653 356 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 MCTP1Q6DN14 999 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 FAM173BQ6P4H8 233 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 HEATR3Q7Z4Q2 680 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 ERO1BQ86YB8 467 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 DIS3L2Q8IYB7 885 aaKnown RBP9.02□□□□□ -0.97
TMC1-202ENST00000340019 RBM46Q8TBY0 533 aaKnown RBP9.02□□□□□ -0.97
TMC1-202ENST00000340019 FOXP1Q9H334 677 aaPredicted RBP9.02□□□□□ -0.97
TMC1-202ENST00000340019 FEM1BQ9UK73 627 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 BTBD18B2RXH4 712 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 DNM1Q05193 864 aaKnown RBP9.02□□□□□ -0.97
TMC1-202ENST00000340019 CDC37Q16543 378 aaPredicted RBP9.02□□□□□ -0.97
TMC1-202ENST00000340019 CHADLQ6NUI6 762 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 BRAPQ7Z569 592 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 FAM160B2Q86V87 743 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 CHURC1Q8WUH1 139 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 ELP3Q9H9T3 547 aa9.02□□□□□ -0.97
TMC1-202ENST00000340019 ISY1Q9ULR0 285 aaKnown RBP9.02□□□□□ -0.97
TMC1-202ENST00000340019 SMCHD1A6NHR9 2005 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 M0R2N6 131 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 MCM4P33991 863 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 HMGCS2P54868 508 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 QRICH1Q2TAL8 776 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 FOXD4L6Q3SYB3 417 aaPredicted RBP9.01□□□□□ -0.97
TMC1-202ENST00000340019 FOXD4L3Q6VB84 417 aaPredicted RBP9.01□□□□□ -0.97
TMC1-202ENST00000340019 OXER1Q8TDS5 423 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 TNFRSF25Q93038 417 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 ZMYND12Q9H0C1 365 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 RANBP17Q9H2T7 1088 aaKnown RBP9.01□□□□□ -0.97
TMC1-202ENST00000340019 FBXO28Q9NVF7 368 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 ESYT2A0FGR8 921 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 IRF6O14896 467 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 ADAMTS3O15072 1205 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 KRT2P35908 639 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 NR5A1Q13285 461 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 SAFBQ15424 915 aaKnown RBP eCLIP9.01□□□□□ -0.97
TMC1-202ENST00000340019 GALNT17Q6IS24 598 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 DAGLBQ8NCG7 672 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 CCDC148Q8NFR7 591 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 PCDHA4Q9UN74 947 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 CALML3P27482 149 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 NLRP5P59047 1200 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 IKQ13123 557 aaPredicted RBP9.01□□□□□ -0.97
TMC1-202ENST00000340019 PPIL2Q13356 520 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 CST9Q5W186 159 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 PPP1R18Q6NYC8 613 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 NOSTRINQ8IVI9 506 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 CCDC12Q8WUD4 166 aaPredicted RBP9.01□□□□□ -0.97
TMC1-202ENST00000340019 RPAP3Q9H6T3 665 aaPredicted RBP9.01□□□□□ -0.97
TMC1-202ENST00000340019 ZNF408Q9H9D4 720 aa9.01□□□□□ -0.97
TMC1-202ENST00000340019 GBA2Q9HCG7 927 aaPredicted RBP9.01□□□□□ -0.97
TMC1-202ENST00000340019 KCNH4Q9UQ05 1017 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms