RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 CNNM4Q6P4Q7 775 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 CCDC43Q96MW1 224 aaKnown RBP13.87□□□□□ -0.19
RIOK3-201ENST00000339486 SELENOSQ9BQE4 189 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
RIOK3-201ENST00000339486 SNAP23O00161 211 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 CUL4BQ13620 913 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
RIOK3-201ENST00000339486 PSD3Q9NYI0 1048 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 TXKP42681 527 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 GUCY2DQ02846 1103 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 PTPROQ16827 1216 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 SLC9C1Q4G0N8 1177 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 ZNF658Q5TYW1 1059 aaPredicted RBP13.87□□□□□ -0.19
RIOK3-201ENST00000339486 KRT79Q5XKE5 535 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 CABP7Q86V35 215 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 RASGRP4Q8TDF6 673 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 LRWD1Q9UFC0 647 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 FAM169AQ9Y6X4 670 aa13.87□□□□□ -0.19
RIOK3-201ENST00000339486 KNDC1Q76NI1 1749 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 TTC26A0AVF1 554 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 TRIM49BA6NDI0 452 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 USP14P54578 494 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 PTPAQ15257 358 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 CCDC84Q86UT8 332 aaPredicted RBP13.86□□□□□ -0.19
RIOK3-201ENST00000339486 FOXP4Q8IVH2 680 aaPredicted RBP13.86□□□□□ -0.19
RIOK3-201ENST00000339486 SYNE4Q8N205 404 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 LCORLQ8N3X6 602 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 GPKOWQ92917 476 aaPredicted RBP eCLIP13.86□□□□□ -0.194e-6■□□□□ 10.4
RIOK3-201ENST00000339486 C6orf50Q9HD87 102 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 TRIM10Q9UDY6 481 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 ADD3Q9UEY8 706 aaKnown RBP13.86□□□□□ -0.19
RIOK3-201ENST00000339486 CYP27B1O15528 508 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 CEP104O60308 925 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 CCNT1O60563 726 aaKnown RBP13.86□□□□□ -0.19
RIOK3-201ENST00000339486 INF2Q27J81 1249 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 RASGRP2Q7LDG7 609 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 CNOT6LQ96LI5 555 aaKnown RBP13.86□□□□□ -0.19
RIOK3-201ENST00000339486 TRIM31Q9BZY9 425 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 FAM184BQ9ULE4 1060 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 PTPRUQ92729 1446 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 SEMA3EO15041 775 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 SCG2P13521 617 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 KIAA0753Q2KHM9 967 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 RSRC2Q7L4I2 434 aaKnown RBP13.86□□□□□ -0.19
RIOK3-201ENST00000339486 AGXT2Q9BYV1 514 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 NHEJ1Q9H9Q4 299 aaPredicted RBP13.86□□□□□ -0.19
RIOK3-201ENST00000339486 HPSEQ9Y251 543 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 ZNF652Q9Y2D9 606 aa13.86□□□□□ -0.19
RIOK3-201ENST00000339486 DIP2CQ9Y2E4 1556 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 TFRCP02786 760 aaKnown RBP13.85□□□□□ -0.19
RIOK3-201ENST00000339486 ATP1A1P05023 1023 aaKnown RBP13.85□□□□□ -0.19
RIOK3-201ENST00000339486 EEF1GP26641 437 aaKnown RBP13.85□□□□□ -0.19
RIOK3-201ENST00000339486 PDCLQ13371 301 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 MMS22LQ6ZRQ5 1243 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 BLIDQ8IZY5 108 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 TMX4Q9H1E5 349 aaPredicted RBP13.85□□□□□ -0.19
RIOK3-201ENST00000339486 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.85□□□□□ -0.195e-7■■■■□ 22.9
RIOK3-201ENST00000339486 GCOM1H8Y6P7 765 aaPredicted RBP13.85□□□□□ -0.19
RIOK3-201ENST00000339486 PPP1R12BO60237 982 aaPredicted RBP13.85□□□□□ -0.19
RIOK3-201ENST00000339486 MYZAPP0CAP1 466 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 COG1Q8WTW3 980 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 LRRC27Q9C0I9 530 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 KCND1Q9NSA2 647 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 L1RE1Q9UN81 338 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 ARID4AP29374 1257 aaPredicted RBP13.85□□□□□ -0.19
RIOK3-201ENST00000339486 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 IFT88Q13099 833 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 MB21D1Q8N884 522 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 MMS19Q96T76 1030 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 SLC39A2Q9NP94 309 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 LCMT1Q9UIC8 334 aa13.85□□□□□ -0.19
RIOK3-201ENST00000339486 MOCS3O95396 460 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 PPP1R2P41236 205 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 TNNI2P48788 182 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 RASSF7Q02833 373 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 MROH5Q6ZUA9 1318 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 GYPCP04921 128 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 EPHB4P54760 987 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 NCAPD2Q15021 1401 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 HNRNPLLQ8WVV9 542 aaKnown RBP13.84□□□□□ -0.19
RIOK3-201ENST00000339486 EPB41L5Q9HCM4 733 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 ANKIB1Q9P2G1 1089 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 SOS2Q07890 1332 aaPredicted RBP13.84□□□□□ -0.19
RIOK3-201ENST00000339486 CYP2D7A0A087X1C5 515 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 NBPF26B4DH59 902 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 PLEKHA8P1O95397 391 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 GNA11P29992 359 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 NAA25Q14CX7 972 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 NBPF10Q6P3W6 841 aaKnown RBP13.84□□□□□ -0.19
RIOK3-201ENST00000339486 SGMS1Q86VZ5 419 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 NBPF15Q8N660 670 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 ANKS4BQ8N8V4 417 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 STK36Q9NRP7 1315 aa13.84□□□□□ -0.19
RIOK3-201ENST00000339486 ZBED6P86452 979 aa13.83□□□□□ -0.19
RIOK3-201ENST00000339486 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.19
RIOK3-201ENST00000339486 LRRC45Q96CN5 670 aa13.83□□□□□ -0.19
RIOK3-201ENST00000339486 LONP1P36776 959 aaKnown RBP13.83□□□□□ -0.2
RIOK3-201ENST00000339486 PRCPP42785 496 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms