RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 KYNUQ16719 465 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 TPD52L1Q16890 204 aaPredicted RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CCDC93Q567U6 631 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 USPL1Q5W0Q7 1092 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 KIAA1211LQ6NV74 962 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 RUNDC3BQ96NL0 473 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 COQ7Q99807 217 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 ESYT1Q9BSJ8 1104 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 UBN1Q9NPG3 1134 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 PPP1R14DQ9NXH3 145 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 B2RBV5 119 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CTNND1O60716 968 aaKnown RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 ALDH1L1O75891 902 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 IDEP14735 1019 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 LRPAP1P30533 357 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 DSG3P32926 999 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 IRS1P35568 1242 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 IGHMBP2P38935 993 aaKnown RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 LAPTM5Q13571 262 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 ARSIQ5FYB1 569 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 AKAP4Q5JQC9 854 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 EFCAB2Q5VUJ9 269 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 ZNF365Q70YC5 407 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 TRIM74Q86UV6 250 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 TRIM73Q86UV7 250 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CTCFLQ8NI51 663 aaPredicted RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 GABPB2Q8TAK5 448 aaPredicted RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 DDI1Q8WTU0 396 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 SNRNP27Q8WVK2 155 aaKnown RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 ERLEC1Q96DZ1 483 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 MTRQ99707 1265 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 RTEL1Q9NZ71 1219 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 OGDHLQ9ULD0 1010 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 FAF1Q9UNN5 650 aaPredicted RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 NOC2LQ9Y3T9 749 aaKnown RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CFAP69A5D8W1 941 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 GOLGA8JA6NMD2 632 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 GOLGA8TH3BQL2 631 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CAPN9O14815 690 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 RAPGEF3O95398 923 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 GOLGA8HP0CJ92 632 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 OAS2P29728 719 aaKnown RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 MAN1A1P33908 653 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CUL4BQ13620 913 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 NDUFAF2Q8N183 169 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 SPDL1Q96EA4 605 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 IFT43Q96FT9 208 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 MAGEB10Q96LZ2 347 aaPredicted RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 SPZ1Q9BXG8 430 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 C11orf16Q9NQ32 467 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 TRPC6Q9Y210 931 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 RUVBL1Q9Y265 456 aaKnown RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 ATAD2Q6PL18 1390 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CTAGE9A4FU28 777 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 H3BRJ5 948 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 FGFR1OPO95684 399 aaKnown RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 ZFXP17010 805 aaPredicted RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CTCFP49711 727 aaPredicted RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 IFFO1Q0D2I5 559 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CWF19L1Q69YN2 538 aaKnown RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 SLC30A9Q6PML9 568 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 TMC7Q7Z402 723 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 KHSRPQ92945 711 aaKnown RBP eCLIP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 ATP6V0A1Q93050 837 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 TATDN2Q93075 761 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 OXCT2Q9BYC2 517 aaPredicted RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 ADAM19Q9H013 955 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 TNMDQ9H2S6 317 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 RRAGCQ9HB90 399 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 IFT122Q9HBG6 1241 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 IFT80Q9P2H3 777 aaPredicted RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CAMK2AQ9UQM7 478 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 RPGRIP1LQ68CZ1 1315 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CCDC69A6NI79 296 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 NEMFO60524 1076 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 ZSCAN20P17040 1043 aaPredicted RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 MYBPC2Q14324 1141 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 PUM3Q15397 648 aaKnown RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 FXNQ16595 210 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CCDC38Q502W7 563 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 HS1BP3Q53T59 392 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CEP78Q5JTW2 689 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 SH3BP5LQ7L8J4 393 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 STX12Q86Y82 276 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 CUL5Q93034 780 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 MRPL46Q9H2W6 279 aaKnown RBP3.57□□□□□ -1.84
SOCS4-201ENST00000339298 SACM1LQ9NTJ5 587 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 PCDHA4Q9UN74 947 aa3.57□□□□□ -1.84
SOCS4-201ENST00000339298 LRRIQ4A6NIV6 560 aa3.56□□□□□ -1.84
SOCS4-201ENST00000339298 ERLIN2O94905 339 aa3.56□□□□□ -1.84
SOCS4-201ENST00000339298 CWF19L2Q2TBE0 894 aaKnown RBP3.56□□□□□ -1.84
SOCS4-201ENST00000339298 FSCBQ5H9T9 825 aa3.56□□□□□ -1.84
SOCS4-201ENST00000339298 ICE2Q659A1 982 aa3.56□□□□□ -1.84
SOCS4-201ENST00000339298 HEATR6Q6AI08 1181 aaKnown RBP3.56□□□□□ -1.84
SOCS4-201ENST00000339298 C11orf96Q7Z7L8 435 aa3.56□□□□□ -1.84
SOCS4-201ENST00000339298 SMARCE1Q969G3 411 aa3.56□□□□□ -1.84
SOCS4-201ENST00000339298 SH3GL1Q99961 368 aa3.56□□□□□ -1.84
SOCS4-201ENST00000339298 TEX12Q9BXU0 123 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms