RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 RLFQ13129 1914 aa16.97■□□□□ 0.31
COMMD4-202ENST00000338995 SYNGAP1Q96PV0 1343 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 BAZ2AQ9UIF9 1905 aaKnown RBP16.96■□□□□ 0.31
COMMD4-202ENST00000338995 MOXD2PA6NHM9 499 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 GSG1L2A8MUP6 293 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 SMIM22K7EJ46 135 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 ATP2A1O14983 1001 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 SMARCA5O60264 1052 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-202ENST00000338995 ZNF865P0CJ78 1059 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-202ENST00000338995 FDX1P10109 184 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 RASA1P20936 1047 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 C9orf50Q5SZB4 431 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 SH3RF1Q7Z6J0 888 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 ZNF467Q7Z7K2 595 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-202ENST00000338995 CPXCR1Q8N123 301 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 STK11IPQ8N1F8 1099 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 ANKRD35Q8N283 1001 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 REPS2Q8NFH8 660 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.96■□□□□ 0.31
COMMD4-202ENST00000338995 STARD7Q9NQZ5 370 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 COL6A3P12111 3177 aa16.96■□□□□ 0.31
COMMD4-202ENST00000338995 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-202ENST00000338995 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
COMMD4-202ENST00000338995 PATL2C9JE40 543 aaKnown RBP16.95■□□□□ 0.3
COMMD4-202ENST00000338995 KIAA0355O15063 1070 aa16.95■□□□□ 0.3
COMMD4-202ENST00000338995 PQBP1O60828 265 aaKnown RBP16.95■□□□□ 0.3
COMMD4-202ENST00000338995 DUSP11O75319 330 aaKnown RBP16.95■□□□□ 0.3
COMMD4-202ENST00000338995 NDUFB10O96000 172 aa16.95■□□□□ 0.3
COMMD4-202ENST00000338995 CHGBP05060 677 aa16.95■□□□□ 0.3
COMMD4-202ENST00000338995 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-202ENST00000338995 PDE4BQ07343 736 aa16.95■□□□□ 0.3
COMMD4-202ENST00000338995 PPP4R3BQ5MIZ7 849 aa16.95■□□□□ 0.3
COMMD4-202ENST00000338995 CCDC174Q6PII3 467 aa16.95■□□□□ 0.3
COMMD4-202ENST00000338995 MAMDC4Q6UXC1 1216 aa16.95■□□□□ 0.3
COMMD4-202ENST00000338995 PCSK9Q8NBP7 692 aaKnown RBP16.95■□□□□ 0.3
COMMD4-202ENST00000338995 MKL1Q969V6 931 aa16.95■□□□□ 0.3
COMMD4-202ENST00000338995 VTI1AQ96AJ9 217 aa16.95■□□□□ 0.3
COMMD4-202ENST00000338995 RNPC3Q96LT9 517 aaKnown RBP16.95■□□□□ 0.3
COMMD4-202ENST00000338995 CDX2Q99626 313 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-202ENST00000338995 TTLL1O95922 423 aa16.94■□□□□ 0.3
COMMD4-202ENST00000338995 ACLYP53396 1101 aa16.94■□□□□ 0.3
COMMD4-202ENST00000338995 OAZ1P54368 228 aa16.94■□□□□ 0.3
COMMD4-202ENST00000338995 FPGSQ05932 587 aa16.94■□□□□ 0.3
COMMD4-202ENST00000338995 CHST13Q8NET6 341 aa16.94■□□□□ 0.3
COMMD4-202ENST00000338995 KIFC2Q96AC6 838 aa16.94■□□□□ 0.3
COMMD4-202ENST00000338995 GLT1D1Q96MS3 346 aa16.94■□□□□ 0.3
COMMD4-202ENST00000338995 NUP88Q99567 741 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-202ENST00000338995 ABHD16BQ9H3Z7 469 aa16.94■□□□□ 0.3
COMMD4-202ENST00000338995 DCTPP1Q9H773 170 aa16.94■□□□□ 0.3
COMMD4-202ENST00000338995 ZHX1Q9UKY1 873 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-202ENST00000338995 DNAH12Q6ZR08 3092 aa16.94■□□□□ 0.3
COMMD4-202ENST00000338995 MROH7Q68CQ1 1323 aa16.94■□□□□ 0.3
COMMD4-202ENST00000338995 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
COMMD4-202ENST00000338995 TMEM265A0A087WTH1 108 aa16.93■□□□□ 0.3
COMMD4-202ENST00000338995 ERC2O15083 957 aa16.93■□□□□ 0.3
COMMD4-202ENST00000338995 GPAA1O43292 621 aa16.93■□□□□ 0.3
COMMD4-202ENST00000338995 ACVR2BQ13705 512 aa16.93■□□□□ 0.3
COMMD4-202ENST00000338995 KCNA10Q16322 511 aa16.93■□□□□ 0.3
COMMD4-202ENST00000338995 ANKRD33Q7Z3H0 272 aa16.93■□□□□ 0.3
COMMD4-202ENST00000338995 CHURC1Q8WUH1 139 aa16.93■□□□□ 0.3
COMMD4-202ENST00000338995 OSBP2Q969R2 916 aa16.93■□□□□ 0.3
COMMD4-202ENST00000338995 ISY1Q9ULR0 285 aaKnown RBP16.93■□□□□ 0.3
COMMD4-202ENST00000338995 A0A0C4DFX4 3053 aa16.93■□□□□ 0.3
COMMD4-202ENST00000338995 ELP1O95163 1332 aa16.93■□□□□ 0.3
COMMD4-202ENST00000338995 ROBO3Q96MS0 1386 aa16.92■□□□□ 0.3
COMMD4-202ENST00000338995 DNAJC25-GNG10A0A024R161 153 aa16.92■□□□□ 0.3
COMMD4-202ENST00000338995 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-202ENST00000338995 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-202ENST00000338995 ADAMTS4O75173 837 aa16.92■□□□□ 0.3
COMMD4-202ENST00000338995 SNAI1O95863 264 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-202ENST00000338995 C6orf222P0C671 652 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-202ENST00000338995 TSPY3P0CV98 308 aa16.92■□□□□ 0.3
COMMD4-202ENST00000338995 TSPY8P0CW00 308 aa16.92■□□□□ 0.3
COMMD4-202ENST00000338995 SLFN13Q68D06 897 aa16.92■□□□□ 0.3
COMMD4-202ENST00000338995 KLHDC9Q8NEP7 349 aa16.92■□□□□ 0.3
COMMD4-202ENST00000338995 SLC38A10Q9HBR0 1119 aa16.92■□□□□ 0.3
COMMD4-202ENST00000338995 RAVER2Q9HCJ3 691 aaKnown RBP16.92■□□□□ 0.3
COMMD4-202ENST00000338995 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-202ENST00000338995 MTMR4Q9NYA4 1195 aa16.92■□□□□ 0.3
COMMD4-202ENST00000338995 RIPK3Q9Y572 518 aa16.92■□□□□ 0.3
COMMD4-202ENST00000338995 BMP3P12645 472 aa16.91■□□□□ 0.3
COMMD4-202ENST00000338995 FAAP100Q0VG06 881 aa16.91■□□□□ 0.3
COMMD4-202ENST00000338995 GNASQ5JWF2 1037 aa16.91■□□□□ 0.3
COMMD4-202ENST00000338995 IFNL3Q8IZI9 196 aa16.91■□□□□ 0.3
COMMD4-202ENST00000338995 GMCL1P1Q8NEA9 526 aa16.91■□□□□ 0.3
COMMD4-202ENST00000338995 NEDD1Q8NHV4 660 aa16.91■□□□□ 0.3
COMMD4-202ENST00000338995 MAFAQ8NHW3 353 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-202ENST00000338995 CEP95Q96GE4 821 aa16.91■□□□□ 0.3
COMMD4-202ENST00000338995 SYNRGQ9UMZ2 1314 aa16.91■□□□□ 0.3
COMMD4-202ENST00000338995 IGKV6D-41A0A0C4DH26 115 aa16.9■□□□□ 0.3
COMMD4-202ENST00000338995 TLR3O15455 904 aaKnown RBP16.9■□□□□ 0.3
COMMD4-202ENST00000338995 PRDM1O75626 825 aa16.9■□□□□ 0.3
COMMD4-202ENST00000338995 TIMP1P01033 207 aa16.9■□□□□ 0.3
COMMD4-202ENST00000338995 IKQ13123 557 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-202ENST00000338995 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
COMMD4-202ENST00000338995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.9■□□□□ 0.3
COMMD4-202ENST00000338995 FAM160B2Q86V87 743 aa16.9■□□□□ 0.3
COMMD4-202ENST00000338995 COL25A1Q9BXS0 654 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-202ENST00000338995 NAPBQ9H115 298 aa16.9■□□□□ 0.3
COMMD4-202ENST00000338995 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms