RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 KRT25Q7Z3Z0 450 aa18.57■□□□□ 0.56
HPS1-202ENST00000338546 MTMR8Q96EF0 704 aa18.57■□□□□ 0.56
HPS1-202ENST00000338546 CLIC6Q96NY7 704 aa18.57■□□□□ 0.56
HPS1-202ENST00000338546 PCDHA6Q9UN73 950 aa18.57■□□□□ 0.56
HPS1-202ENST00000338546 PCDHA8Q9Y5H6 950 aa18.57■□□□□ 0.56
HPS1-202ENST00000338546 FAM205CA6NFA0 338 aa18.56■□□□□ 0.56
HPS1-202ENST00000338546 ICA1Q05084 483 aa18.56■□□□□ 0.56
HPS1-202ENST00000338546 ANO6Q4KMQ2 910 aa18.56■□□□□ 0.56
HPS1-202ENST00000338546 KANK3Q6NY19 840 aa18.56■□□□□ 0.56
HPS1-202ENST00000338546 CCDC34Q96HJ3 373 aa18.56■□□□□ 0.56
HPS1-202ENST00000338546 GMCL1Q96IK5 515 aa18.56■□□□□ 0.56
HPS1-202ENST00000338546 PIGSQ96S52 555 aa18.56■□□□□ 0.56
HPS1-202ENST00000338546 PYM1Q9BRP8 204 aaKnown RBP18.56■□□□□ 0.56
HPS1-202ENST00000338546 CNTNAP1P78357 1384 aa18.56■□□□□ 0.56
HPS1-202ENST00000338546 ARFGEF1Q9Y6D6 1849 aa18.56■□□□□ 0.56
HPS1-202ENST00000338546 SMCO2A6NFE2 343 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 LAD1O00515 517 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 ATP2B1P20020 1258 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 EIF6P56537 245 aaKnown RBP18.55■□□□□ 0.56
HPS1-202ENST00000338546 DPF2Q92785 391 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 TRIM44Q96DX7 344 aaPredicted RBP18.55■□□□□ 0.56
HPS1-202ENST00000338546 NAT10Q9H0A0 1025 aaKnown RBP18.55■□□□□ 0.56
HPS1-202ENST00000338546 GLT8D2Q9H1C3 349 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.55■□□□□ 0.56
HPS1-202ENST00000338546 USP25Q9UHP3 1055 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 FRMPD2Q68DX3 1309 aaPredicted RBP18.55■□□□□ 0.56
HPS1-202ENST00000338546 TCP10L2B9ZVM9 353 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 TNNI2P48788 182 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 MAP3K10Q02779 954 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 SEPT2Q15019 361 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 ZRSR1Q15695 479 aaKnown RBP18.55■□□□□ 0.56
HPS1-202ENST00000338546 SLFN13Q68D06 897 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 KRBA2Q6ZNG9 492 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 UBA5Q9GZZ9 404 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 JMJD4Q9H9V9 463 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 MYOZ2Q9NPC6 264 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 PPP1R1BQ9UD71 204 aaPredicted RBP18.55■□□□□ 0.56
HPS1-202ENST00000338546 BCS1LQ9Y276 419 aa18.55■□□□□ 0.56
HPS1-202ENST00000338546 CLRN2A0PK11 232 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 ZNF165P49910 485 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 ATP2B2Q01814 1243 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 PTGDRQ13258 359 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 ZNF174Q15697 407 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 RASGRP2Q7LDG7 609 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 HOMER1Q86YM7 354 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 CLEC10AQ8IUN9 316 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 SIAH1Q8IUQ4 282 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 ADGRF4Q8IZF3 695 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 VAT1LQ9HCJ6 419 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 GPCPD1Q9NPB8 672 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 TUBE1Q9UJT0 475 aa18.54■□□□□ 0.56
HPS1-202ENST00000338546 FAM196BA6NMK8 535 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 FZD9O00144 591 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 WNT10BO00744 389 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 ZBTB5O15062 677 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 SLC1A4P43007 532 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 CCDC96Q2M329 555 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 TEX2Q8IWB9 1127 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 CNNM3Q8NE01 707 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 BPIFA3Q9BQP9 254 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 CSRNP2Q9H175 543 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 CPVLQ9H3G5 476 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 CBX8Q9HC52 389 aa18.53■□□□□ 0.56
HPS1-202ENST00000338546 PRPHP41219 470 aa18.52■□□□□ 0.56
HPS1-202ENST00000338546 TNFAIP1Q13829 316 aa18.52■□□□□ 0.56
HPS1-202ENST00000338546 NONOQ15233 471 aaKnown RBP eCLIP18.52■□□□□ 0.56
HPS1-202ENST00000338546 NOM1Q5C9Z4 860 aaKnown RBP18.52■□□□□ 0.56
HPS1-202ENST00000338546 CEP57L1Q8IYX8 460 aa18.52■□□□□ 0.56
HPS1-202ENST00000338546 PGAP2Q9UHJ9 254 aa18.52■□□□□ 0.56
HPS1-202ENST00000338546 F5H6K3 240 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 GH2P01242 217 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 LONP1P36776 959 aaKnown RBP18.51■□□□□ 0.55
HPS1-202ENST00000338546 NLRP12P59046 1061 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 KLRC3Q07444 240 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 LONRF3Q496Y0 759 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 REXO1Q8N1G1 1221 aaKnown RBP18.51■□□□□ 0.55
HPS1-202ENST00000338546 C4orf32Q8N8J7 132 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 DNAJC25Q9H1X3 360 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 VEZTQ9HBM0 779 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 ARHGEF10LQ9HCE6 1279 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 GINM1Q9NU53 330 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 GDF11O95390 407 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 ADCY7P51828 1080 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 GRIN1Q05586 938 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 BTNL9Q6UXG8 535 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 RIC8AQ9NPQ8 531 aa18.51■□□□□ 0.55
HPS1-202ENST00000338546 WNT7AO00755 349 aa18.5■□□□□ 0.55
HPS1-202ENST00000338546 ADAMTS3O15072 1205 aa18.5■□□□□ 0.55
HPS1-202ENST00000338546 SLURP2P0DP57 97 aa18.5■□□□□ 0.55
HPS1-202ENST00000338546 MCM7P33993 719 aa18.5■□□□□ 0.55
HPS1-202ENST00000338546 MRPL12P52815 198 aaKnown RBP18.5■□□□□ 0.55
HPS1-202ENST00000338546 IQCB1Q15051 598 aa18.5■□□□□ 0.55
HPS1-202ENST00000338546 MCTP2Q6DN12 878 aa18.5■□□□□ 0.55
HPS1-202ENST00000338546 TTBK2Q6IQ55 1244 aa18.5■□□□□ 0.55
HPS1-202ENST00000338546 KCTD1Q719H9 257 aa18.5■□□□□ 0.55
HPS1-202ENST00000338546 SH2D4AQ9H788 454 aa18.5■□□□□ 0.55
HPS1-202ENST00000338546 POLR2DO15514 142 aaKnown RBP18.49■□□□□ 0.55
HPS1-202ENST00000338546 NDUFB10O96000 172 aa18.49■□□□□ 0.55
HPS1-202ENST00000338546 MDM2Q00987 491 aaPredicted RBP18.49■□□□□ 0.55
HPS1-202ENST00000338546 TRAF1Q13077 416 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms