RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 FEM1BQ9UK73 627 aa20.38■□□□□ 0.85
CHGA-202ENST00000334654 SLC45A1Q9Y2W3 748 aa20.38■□□□□ 0.85
CHGA-202ENST00000334654 PDHXO00330 501 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 MAP2K2P36507 400 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 CMTR1Q8N1G2 835 aaKnown RBP20.37■□□□□ 0.85
CHGA-202ENST00000334654 GTF3C6Q969F1 213 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 P2RX7Q99572 595 aaKnown RBP20.37■□□□□ 0.85
CHGA-202ENST00000334654 SH2B1Q9NRF2 756 aaPredicted RBP20.37■□□□□ 0.85
CHGA-202ENST00000334654 RBM28Q9NW13 759 aaKnown RBP20.37■□□□□ 0.85
CHGA-202ENST00000334654 ADAMTS5Q9UNA0 930 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 DSG3P32926 999 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 STAT2P52630 851 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 SREBF2Q12772 1141 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 COG2Q14746 738 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 DNAJC5GQ8N7S2 189 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 CHURC1Q8WUH1 139 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 RIOX1Q9H6W3 641 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 PPP1R9AQ9ULJ8 1098 aa20.37■□□□□ 0.85
CHGA-202ENST00000334654 COL11A1P12107 1806 aaPredicted RBP20.36■□□□□ 0.85
CHGA-202ENST00000334654 FLOT1O75955 427 aa20.36■□□□□ 0.85
CHGA-202ENST00000334654 CTDNEP1O95476 244 aa20.36■□□□□ 0.85
CHGA-202ENST00000334654 SMARCA1P28370 1054 aa20.36■□□□□ 0.85
CHGA-202ENST00000334654 GNAQP50148 359 aa20.36■□□□□ 0.85
CHGA-202ENST00000334654 FAM160B2Q86V87 743 aa20.36■□□□□ 0.85
CHGA-202ENST00000334654 ADGRF4Q8IZF3 695 aa20.36■□□□□ 0.85
CHGA-202ENST00000334654 PRPF38AQ8NAV1 312 aaKnown RBP20.36■□□□□ 0.85
CHGA-202ENST00000334654 SLF1Q9BQI6 1058 aa20.36■□□□□ 0.85
CHGA-202ENST00000334654 ZCCHC17Q9NP64 241 aaKnown RBP20.36■□□□□ 0.85
CHGA-202ENST00000334654 PRR12Q9ULL5 1215 aa20.36■□□□□ 0.85
CHGA-202ENST00000334654 SMCHD1A6NHR9 2005 aa20.36■□□□□ 0.85
CHGA-202ENST00000334654 CEP350Q5VT06 3117 aa20.35■□□□□ 0.85
CHGA-202ENST00000334654 SPDYE16A6NNV3 312 aaPredicted RBP20.35■□□□□ 0.85
CHGA-202ENST00000334654 DTNBO60941 627 aa20.35■□□□□ 0.85
CHGA-202ENST00000334654 PABPC4Q13310 644 aaKnown RBP eCLIP20.35■□□□□ 0.85
CHGA-202ENST00000334654 SYDE2Q5VT97 1194 aa20.35■□□□□ 0.85
CHGA-202ENST00000334654 ATG4CQ96DT6 458 aa20.35■□□□□ 0.85
CHGA-202ENST00000334654 MTMR8Q96EF0 704 aa20.35■□□□□ 0.85
CHGA-202ENST00000334654 SPZ1Q9BXG8 430 aa20.35■□□□□ 0.85
CHGA-202ENST00000334654 JMJD4Q9H9V9 463 aa20.35■□□□□ 0.85
CHGA-202ENST00000334654 ISY1Q9ULR0 285 aaKnown RBP20.35■□□□□ 0.85
CHGA-202ENST00000334654 MYPNQ86TC9 1320 aa20.35■□□□□ 0.85
CHGA-202ENST00000334654 A0A0G2JMZ2 1700 aa20.34■□□□□ 0.85
CHGA-202ENST00000334654 CCDC196A0A1B0GTZ2 297 aa20.34■□□□□ 0.85
CHGA-202ENST00000334654 K7ELQ4 463 aaPredicted RBP20.34■□□□□ 0.85
CHGA-202ENST00000334654 CYP2C8P10632 490 aa20.34■□□□□ 0.85
CHGA-202ENST00000334654 IFNAR1P17181 557 aa20.34■□□□□ 0.85
CHGA-202ENST00000334654 LBX2Q6XYB7 198 aa20.34■□□□□ 0.85
CHGA-202ENST00000334654 CCDC83Q8IWF9 413 aa20.34■□□□□ 0.85
CHGA-202ENST00000334654 REM2Q8IYK8 340 aaPredicted RBP20.34■□□□□ 0.85
CHGA-202ENST00000334654 CCDC82Q8N4S0 544 aa20.34■□□□□ 0.85
CHGA-202ENST00000334654 KIFC2Q96AC6 838 aa20.34■□□□□ 0.85
CHGA-202ENST00000334654 LZTS2Q9BRK4 669 aa20.34■□□□□ 0.85
CHGA-202ENST00000334654 HOXC10Q9NYD6 342 aa20.34■□□□□ 0.85
CHGA-202ENST00000334654 CNTNAP5Q8WYK1 1306 aa20.34■□□□□ 0.85
CHGA-202ENST00000334654 OSBPP22059 807 aa20.33■□□□□ 0.85
CHGA-202ENST00000334654 HERVK_113P62684 666 aa20.33■□□□□ 0.85
CHGA-202ENST00000334654 IRX3P78415 501 aaPredicted RBP20.33■□□□□ 0.85
CHGA-202ENST00000334654 CUL4AQ13619 759 aa20.33■□□□□ 0.85
CHGA-202ENST00000334654 REPS2Q8NFH8 660 aa20.33■□□□□ 0.85
CHGA-202ENST00000334654 RBM19Q9Y4C8 960 aaKnown RBP20.33■□□□□ 0.85
CHGA-202ENST00000334654 MYH6P13533 1939 aa20.33■□□□□ 0.85
CHGA-202ENST00000334654 VWA5AO00534 786 aa20.32■□□□□ 0.84
CHGA-202ENST00000334654 PPFIA3O75145 1194 aa20.32■□□□□ 0.84
CHGA-202ENST00000334654 SNAP25P60880 206 aa20.32■□□□□ 0.84
CHGA-202ENST00000334654 IKQ13123 557 aaPredicted RBP20.32■□□□□ 0.84
CHGA-202ENST00000334654 SLC38A10Q9HBR0 1119 aa20.32■□□□□ 0.84
CHGA-202ENST00000334654 VAT1LQ9HCJ6 419 aa20.32■□□□□ 0.84
CHGA-202ENST00000334654 ADGRA2Q96PE1 1338 aa20.32■□□□□ 0.84
CHGA-202ENST00000334654 PCNTO95613 3336 aa20.32■□□□□ 0.84
CHGA-202ENST00000334654 PEX10O60683 326 aa20.31■□□□□ 0.84
CHGA-202ENST00000334654 CNMDO75829 334 aa20.31■□□□□ 0.84
CHGA-202ENST00000334654 SAMD1Q6SPF0 538 aaPredicted RBP20.31■□□□□ 0.84
CHGA-202ENST00000334654 NSUN7Q8NE18 718 aaKnown RBP20.31■□□□□ 0.84
CHGA-202ENST00000334654 PHKBQ93100 1093 aa20.31■□□□□ 0.84
CHGA-202ENST00000334654 PIGSQ96S52 555 aa20.31■□□□□ 0.84
CHGA-202ENST00000334654 RANBP17Q9H2T7 1088 aaKnown RBP20.31■□□□□ 0.84
CHGA-202ENST00000334654 RBPJLQ9UBG7 517 aa20.31■□□□□ 0.84
CHGA-202ENST00000334654 PNMA3Q9UL41 463 aa20.31■□□□□ 0.84
CHGA-202ENST00000334654 OTUD7BQ6GQQ9 843 aa20.3■□□□□ 0.84
CHGA-202ENST00000334654 TXNRD2Q9NNW7 524 aa20.3■□□□□ 0.84
CHGA-202ENST00000334654 BTBD7Q9P203 1132 aa20.3■□□□□ 0.84
CHGA-202ENST00000334654 ZNF536O15090 1300 aa20.3■□□□□ 0.84
CHGA-202ENST00000334654 hCG_1642624A0A1W2PR95 340 aa20.3■□□□□ 0.84
CHGA-202ENST00000334654 CPLX1O14810 134 aa20.3■□□□□ 0.84
CHGA-202ENST00000334654 PRPF3O43395 683 aaKnown RBP20.3■□□□□ 0.84
CHGA-202ENST00000334654 DHX16O60231 1041 aaKnown RBP20.3■□□□□ 0.84
CHGA-202ENST00000334654 PPP1R11O60927 126 aaPredicted RBP20.3■□□□□ 0.84
CHGA-202ENST00000334654 FDPSP14324 419 aaKnown RBP20.3■□□□□ 0.84
CHGA-202ENST00000334654 TAF1CQ15572 869 aaPredicted RBP20.3■□□□□ 0.84
CHGA-202ENST00000334654 PKN1Q16512 942 aa20.3■□□□□ 0.84
CHGA-202ENST00000334654 HSCBQ8IWL3 235 aa20.3■□□□□ 0.84
CHGA-202ENST00000334654 SMARCC2Q8TAQ2 1214 aa20.3■□□□□ 0.84
CHGA-202ENST00000334654 R3HDMLQ9H3Y0 253 aa20.3■□□□□ 0.84
CHGA-202ENST00000334654 V9GY48 417 aaPredicted RBP20.3■□□□□ 0.84
CHGA-202ENST00000334654 CA12O43570 354 aa20.29■□□□□ 0.84
CHGA-202ENST00000334654 JAK2O60674 1132 aa20.29■□□□□ 0.84
CHGA-202ENST00000334654 FMNL1O95466 1100 aaPredicted RBP20.29■□□□□ 0.84
CHGA-202ENST00000334654 FDX1P10109 184 aa20.29■□□□□ 0.84
CHGA-202ENST00000334654 TMEM132BQ14DG7 1078 aa20.29■□□□□ 0.84
CHGA-202ENST00000334654 CDC37Q16543 378 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms