RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CXCL11O14625 94 aa19.19■□□□□ 0.66
SHOX-201ENST00000334060 FLOT1O75955 427 aa19.19■□□□□ 0.66
SHOX-201ENST00000334060 MCM2P49736 904 aa19.19■□□□□ 0.66
SHOX-201ENST00000334060 SNAPC2Q13487 334 aa19.19■□□□□ 0.66
SHOX-201ENST00000334060 TYW1BQ6NUM6 668 aa19.19■□□□□ 0.66
SHOX-201ENST00000334060 C19orf81C9J6K1 198 aa19.19■□□□□ 0.66
SHOX-201ENST00000334060 WDR46O15213 610 aaKnown RBP19.19■□□□□ 0.66
SHOX-201ENST00000334060 SH2D4AQ9H788 454 aa19.19■□□□□ 0.66
SHOX-201ENST00000334060 TMOD4Q9NZQ9 345 aa19.19■□□□□ 0.66
SHOX-201ENST00000334060 CENPFP49454 3210 aa19.18■□□□□ 0.66
SHOX-201ENST00000334060 DHX16O60231 1041 aaKnown RBP19.18■□□□□ 0.66
SHOX-201ENST00000334060 GJB2P29033 226 aa19.18■□□□□ 0.66
SHOX-201ENST00000334060 USP14P54578 494 aa19.18■□□□□ 0.66
SHOX-201ENST00000334060 ASPRV1Q53RT3 343 aa19.18■□□□□ 0.66
SHOX-201ENST00000334060 CATSPERGQ6ZRH7 1159 aa19.18■□□□□ 0.66
SHOX-201ENST00000334060 SMARCC2Q8TAQ2 1214 aa19.18■□□□□ 0.66
SHOX-201ENST00000334060 P2RX7Q99572 595 aaKnown RBP19.18■□□□□ 0.66
SHOX-201ENST00000334060 RASSF10A6NK89 507 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 CPLX1O14810 134 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 ECM2O94769 699 aaPredicted RBP19.17■□□□□ 0.66
SHOX-201ENST00000334060 CALM1P0DP23 149 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 CALM2P0DP24 149 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 CALM3P0DP25 149 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 IFNAR1P17181 557 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 CCDC174Q6PII3 467 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 LPAR1Q92633 364 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 CAPNS2Q96L46 248 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 RIOX1Q9H6W3 641 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 SPDYE16A6NNV3 312 aaPredicted RBP19.17■□□□□ 0.66
SHOX-201ENST00000334060 ZBTB48P10074 688 aaPredicted RBP19.17■□□□□ 0.66
SHOX-201ENST00000334060 VEGFBP49765 207 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 STAT2P52630 851 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 GUCY1B3Q02153 619 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 KIF23Q02241 960 aaPredicted RBP19.17■□□□□ 0.66
SHOX-201ENST00000334060 DEFB115Q30KQ5 88 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 SYDE2Q5VT97 1194 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 ASCC2Q9H1I8 757 aaPredicted RBP19.17■□□□□ 0.66
SHOX-201ENST00000334060 TXNRD2Q9NNW7 524 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 AGTPBP1Q9UPW5 1226 aa19.17■□□□□ 0.66
SHOX-201ENST00000334060 COL11A1P12107 1806 aaPredicted RBP19.16■□□□□ 0.66
SHOX-201ENST00000334060 RCAN1P53805 252 aa19.16■□□□□ 0.66
SHOX-201ENST00000334060 PPP4R3BQ5MIZ7 849 aa19.16■□□□□ 0.66
SHOX-201ENST00000334060 COA7Q96BR5 231 aa19.16■□□□□ 0.66
SHOX-201ENST00000334060 MAP3K14Q99558 947 aa19.16■□□□□ 0.66
SHOX-201ENST00000334060 SYNPO2Q9UMS6 1093 aa19.16■□□□□ 0.66
SHOX-201ENST00000334060 ZNF536O15090 1300 aa19.16■□□□□ 0.66
SHOX-201ENST00000334060 UNCXA6NJT0 531 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 PDHXO00330 501 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 FMNL1O95466 1100 aaPredicted RBP19.15■□□□□ 0.66
SHOX-201ENST00000334060 KIF5BP33176 963 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 GTF2A2P52657 109 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 CDC37Q16543 378 aaPredicted RBP19.15■□□□□ 0.66
SHOX-201ENST00000334060 QRICH1Q2TAL8 776 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 GPATCH4Q5T3I0 446 aaKnown RBP19.15■□□□□ 0.66
SHOX-201ENST00000334060 BTNL9Q6UXG8 535 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 RBM28Q9NW13 759 aaKnown RBP19.15■□□□□ 0.66
SHOX-201ENST00000334060 ORC3Q9UBD5 711 aaPredicted RBP19.15■□□□□ 0.66
SHOX-201ENST00000334060 C1QTNF8P60827 252 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 WWC2Q6AWC2 1192 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 PROCA1Q8NCQ7 364 aaPredicted RBP19.15■□□□□ 0.66
SHOX-201ENST00000334060 AGBL1Q96MI9 1066 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 SLF1Q9BQI6 1058 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 RAVER2Q9HCJ3 691 aaKnown RBP19.15■□□□□ 0.66
SHOX-201ENST00000334060 VPS54Q9P1Q0 977 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 BTBD7Q9P203 1132 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 PPP1R9AQ9ULJ8 1098 aa19.15■□□□□ 0.66
SHOX-201ENST00000334060 USH1GQ495M9 461 aa19.14■□□□□ 0.65
SHOX-201ENST00000334060 CPXCR1Q8N123 301 aa19.14■□□□□ 0.65
SHOX-201ENST00000334060 MTMR8Q96EF0 704 aa19.14■□□□□ 0.65
SHOX-201ENST00000334060 CHAMP1Q96JM3 812 aa19.14■□□□□ 0.65
SHOX-201ENST00000334060 SPZ1Q9BXG8 430 aa19.14■□□□□ 0.65
SHOX-201ENST00000334060 RIPK3Q9Y572 518 aa19.14■□□□□ 0.65
SHOX-201ENST00000334060 CNMDO75829 334 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 CETPP11597 493 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 DSG3P32926 999 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 FOXD4L5Q5VV16 416 aaPredicted RBP19.13■□□□□ 0.65
SHOX-201ENST00000334060 REPS2Q8NFH8 660 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 FOXD4L4Q8WXT5 416 aaPredicted RBP19.13■□□□□ 0.65
SHOX-201ENST00000334060 KCNJ14Q9UNX9 436 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 USP17L15C9J2P7 530 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 USP17L13C9JLJ4 530 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 USP17L11C9JVI0 530 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 USP17L18D6R9N7 530 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 USP17L22D6RA61 530 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 USP17L17D6RBQ6 530 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 USP17L19D6RCP7 530 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 USP17L20D6RJB6 530 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 VWA5AO00534 786 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 SSRP1Q08945 709 aaKnown RBP19.13■□□□□ 0.65
SHOX-201ENST00000334060 USP17L24Q0WX57 530 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 BECN1Q14457 450 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 TMEM132BQ14DG7 1078 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 Q3C1V9 767 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 NOM1Q5C9Z4 860 aaKnown RBP19.13■□□□□ 0.65
SHOX-201ENST00000334060 FEM1BQ9UK73 627 aa19.13■□□□□ 0.65
SHOX-201ENST00000334060 HSP90AA1P07900 732 aaKnown RBP19.12■□□□□ 0.65
SHOX-201ENST00000334060 SMC3Q9UQE7 1217 aa19.12■□□□□ 0.65
SHOX-201ENST00000334060 MYH6P13533 1939 aa19.12■□□□□ 0.65
SHOX-201ENST00000334060 TESPA1A2RU30 521 aaPredicted RBP19.12■□□□□ 0.65
SHOX-201ENST00000334060 PRPF3O43395 683 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms