RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 XBP1P17861 261 aa10.04□□□□□ -0.8
LSAMP-201ENST00000333617 TROAPQ12815 778 aa10.04□□□□□ -0.8
LSAMP-201ENST00000333617 NOSTRINQ8IVI9 506 aa10.04□□□□□ -0.8
LSAMP-201ENST00000333617 MAPKAPK5Q8IW41 473 aa10.04□□□□□ -0.8
LSAMP-201ENST00000333617 DIS3L2Q8IYB7 885 aaKnown RBP10.04□□□□□ -0.8
LSAMP-201ENST00000333617 FMR1NBQ8N0W7 255 aaPredicted RBP10.04□□□□□ -0.8
LSAMP-201ENST00000333617 MPNDQ8N594 471 aa10.04□□□□□ -0.8
LSAMP-201ENST00000333617 JMYQ8N9B5 988 aa10.04□□□□□ -0.8
LSAMP-201ENST00000333617 CTCFLQ8NI51 663 aaPredicted RBP10.04□□□□□ -0.8
LSAMP-201ENST00000333617 COA1Q9GZY4 146 aa10.04□□□□□ -0.8
LSAMP-201ENST00000333617 TMX4Q9H1E5 349 aaPredicted RBP10.04□□□□□ -0.8
LSAMP-201ENST00000333617 FOXP1Q9H334 677 aaPredicted RBP10.04□□□□□ -0.8
LSAMP-201ENST00000333617 MKNK2Q9HBH9 465 aa10.04□□□□□ -0.8
LSAMP-201ENST00000333617 KCNJ14Q9UNX9 436 aa10.04□□□□□ -0.8
LSAMP-201ENST00000333617 A0A1B0GVL5 298 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 PRPF3O43395 683 aaKnown RBP10.03□□□□□ -0.8
LSAMP-201ENST00000333617 PPP6R2O75170 966 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 CAVIN2O95810 425 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 NDUFA8P51970 172 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 TFAP4Q01664 338 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 SLC4A8Q2Y0W8 1093 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 ANO6Q4KMQ2 910 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 CCDC178Q5BJE1 867 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 TMTC3Q6ZXV5 915 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 TEX11Q8IYF3 940 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 MASTLQ96GX5 879 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 USB1Q9BQ65 265 aaKnown RBP10.03□□□□□ -0.8
LSAMP-201ENST00000333617 ZC3H12CQ9C0D7 883 aaKnown RBP10.03□□□□□ -0.8
LSAMP-201ENST00000333617 CCDC39Q9UFE4 941 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 USP25Q9UHP3 1055 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 GAKO14976 1311 aa10.03□□□□□ -0.8
LSAMP-201ENST00000333617 BTBD18B2RXH4 712 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 GDF9O60383 454 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 PLEKHA8P1O95397 391 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 ADCY5O95622 1261 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 CMA1P23946 247 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 MARCKSP29966 332 aaPredicted RBP10.02□□□□□ -0.81
LSAMP-201ENST00000333617 GTF2IP78347 998 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 PTPAQ15257 358 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 AXDND1Q5T1B0 1012 aaPredicted RBP10.02□□□□□ -0.81
LSAMP-201ENST00000333617 DPP8Q6V1X1 898 aaPredicted RBP10.02□□□□□ -0.81
LSAMP-201ENST00000333617 ZSCAN30Q86W11 494 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 ZNF444Q8N0Y2 327 aaPredicted RBP10.02□□□□□ -0.81
LSAMP-201ENST00000333617 DYNLL2Q96FJ2 89 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 MAP3K14Q99558 947 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 KAT14Q9H8E8 782 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 ZNF287Q9HBT7 754 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 SAP30BPQ9UHR5 308 aaKnown RBP10.02□□□□□ -0.81
LSAMP-201ENST00000333617 SUGT1Q9Y2Z0 365 aa10.02□□□□□ -0.81
LSAMP-201ENST00000333617 SOCS7O14512 581 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 PTMAP06454 111 aaKnown RBP10.01□□□□□ -0.81
LSAMP-201ENST00000333617 TSPY3P0CV98 308 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 TSPY8P0CW00 308 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 KIF5BP33176 963 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 TTLL12Q14166 644 aaPredicted RBP10.01□□□□□ -0.81
LSAMP-201ENST00000333617 PKN1Q16512 942 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 STX1AQ16623 288 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 RILPL1Q5EBL4 403 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 MSL1Q68DK7 614 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 DGKHQ86XP1 1220 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 ANKS1AQ92625 1134 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 HLA-CQ95604 372 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 SDF4Q9BRK5 362 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 CBX8Q9HC52 389 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 FLT1P17948 1338 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 CNTNAP5Q8WYK1 1306 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 TNFRSF10AO00220 468 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 CUTAO60888 179 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 WDHD1O75717 1129 aaPredicted RBP10.01□□□□□ -0.81
LSAMP-201ENST00000333617 DGAT1O75907 488 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 PFKFB1P16118 471 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 MSNP26038 577 aaKnown RBP10.01□□□□□ -0.81
LSAMP-201ENST00000333617 SSTR3P32745 418 aaPredicted RBP10.01□□□□□ -0.81
LSAMP-201ENST00000333617 PLCD1P51178 756 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 MMP16P51512 607 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 RHBDL3P58872 404 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 AMHR2Q16671 573 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 PKDCCQ504Y2 493 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 RCSD1Q6JBY9 416 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 SRBD1Q8N5C6 995 aaKnown RBP10.01□□□□□ -0.81
LSAMP-201ENST00000333617 ZNF622Q969S3 477 aaKnown RBP eCLIP10.01□□□□□ -0.81
LSAMP-201ENST00000333617 EYA3Q99504 573 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 PHF20Q9BVI0 1012 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 REPIN1Q9BWE0 567 aaKnown RBP10.01□□□□□ -0.81
LSAMP-201ENST00000333617 DNAJC25Q9H1X3 360 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 IL17RBQ9NRM6 502 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 TCP11L1Q9NUJ3 509 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 VPS54Q9P1Q0 977 aa10.01□□□□□ -0.81
LSAMP-201ENST00000333617 GREB1LQ9C091 1923 aaPredicted RBP10.01□□□□□ -0.81
LSAMP-201ENST00000333617 hCG_1642624A0A1W2PR95 340 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 USP17L3A6NCW0 530 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 USP17L4A6NCW7 530 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 ZBTB24O43167 697 aaPredicted RBP10□□□□□ -0.81
LSAMP-201ENST00000333617 ZNF202O95125 648 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 KRT2P35908 639 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 ZNF165P49910 485 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 TOB1P50616 345 aaPredicted RBP10□□□□□ -0.81
LSAMP-201ENST00000333617 NR5A1Q13285 461 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 OLFM4Q6UX06 510 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 C16orf86Q6ZW13 317 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms