RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 MTFR1Q15390 333 aa11.41□□□□□ -0.58
SYN3-201ENST00000332840 GPR142Q7Z601 462 aa11.41□□□□□ -0.58
SYN3-201ENST00000332840 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
SYN3-201ENST00000332840 CEP95Q96GE4 821 aa11.41□□□□□ -0.58
SYN3-201ENST00000332840 APBA2Q99767 749 aa11.41□□□□□ -0.58
SYN3-201ENST00000332840 UPF3BQ9BZI7 483 aaKnown RBP11.41□□□□□ -0.58
SYN3-201ENST00000332840 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
SYN3-201ENST00000332840 MROH8Q9H579 483 aa11.41□□□□□ -0.58
SYN3-201ENST00000332840 TOMM22Q9NS69 142 aa11.41□□□□□ -0.58
SYN3-201ENST00000332840 RBM27Q9P2N5 1060 aaKnown RBP11.41□□□□□ -0.58
SYN3-201ENST00000332840 CLIP2Q9UDT6 1046 aa11.41□□□□□ -0.58
SYN3-201ENST00000332840 ATAD5Q96QE3 1844 aa11.41□□□□□ -0.58
SYN3-201ENST00000332840 SLC15A5A6NIM6 579 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 F5H6K3 240 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 RANBP6O60518 1105 aaKnown RBP11.4□□□□□ -0.58
SYN3-201ENST00000332840 CNMDO75829 334 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 SLC25A27O95847 323 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 NDUFB10O96000 172 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 INHAP05111 366 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 GJB1P08034 283 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 CYP21A2P08686 494 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 FDX1P10109 184 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 KLRC3Q07444 240 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 ADCK5Q3MIX3 580 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 WDR78Q5VTH9 848 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 BLOC1S2Q6QNY1 142 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 MFSD6Q6ZSS7 791 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 RUFY3Q7L099 469 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 ABRAQ8N0Z2 381 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 PRPF38AQ8NAV1 312 aaKnown RBP11.4□□□□□ -0.58
SYN3-201ENST00000332840 TTC14Q96N46 770 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 SLF1Q9BQI6 1058 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 SPATC1LQ9H0A9 340 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 RNF208Q9H0X6 261 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 PORCNQ9H237 461 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 ALDH8A1Q9H2A2 487 aaPredicted RBP11.4□□□□□ -0.58
SYN3-201ENST00000332840 PDRG1Q9NUG6 133 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 SLC5A4Q9NY91 659 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 CHMP5Q9NZZ3 219 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 GJD2Q9UKL4 321 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 PPP1R9AQ9ULJ8 1098 aa11.4□□□□□ -0.58
SYN3-201ENST00000332840 ZNF213O14771 459 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 HMGB1P09429 215 aaKnown RBP11.39□□□□□ -0.59
SYN3-201ENST00000332840 HOXC6P09630 235 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 CCL5P13501 91 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 ELNP15502 786 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 PTPREP23469 700 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 CTDSPL2Q05D32 466 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 MAP2K5Q13163 448 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 IMMTQ16891 758 aaKnown RBP11.39□□□□□ -0.59
SYN3-201ENST00000332840 Q3C1V9 767 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 CCDC178Q5BJE1 867 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 FAM47AQ5JRC9 791 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 KIAA1755Q5JYT7 1200 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 MORN1Q5T089 497 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 FAM83BQ5T0W9 1011 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 AKNAD1Q5T1N1 836 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 STAG1Q8WVM7 1258 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 ESR2Q92731 530 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 ATG4CQ96DT6 458 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 GMCL1Q96IK5 515 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 NEK1Q96PY6 1258 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 MOV10L1Q9BXT6 1211 aaKnown RBP11.39□□□□□ -0.59
SYN3-201ENST00000332840 BTBD7Q9P203 1132 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 FEM1BQ9UK73 627 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 CIZ1Q9ULV3 898 aaPredicted RBP11.39□□□□□ -0.59
SYN3-201ENST00000332840 ADAMTS5Q9UNA0 930 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 STX8Q9UNK0 236 aa11.39□□□□□ -0.59
SYN3-201ENST00000332840 CTDP1Q9Y5B0 961 aaPredicted RBP11.39□□□□□ -0.59
SYN3-201ENST00000332840 VWA5AO00534 786 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 DLL1O00548 723 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 CYP2B6P20813 491 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 RPS6KB1P23443 525 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 GJA8P48165 433 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 AK2P54819 239 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 GRB14Q14449 540 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 PLS1Q14651 629 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 ANKRD1Q15327 319 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 SLFN13Q68D06 897 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 FAM160B2Q86V87 743 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 CHURC1Q8WUH1 139 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 USP6NLQ92738 828 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 SHISA4Q96DD7 197 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 TMX3Q96JJ7 454 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 ZSCAN31Q96LW9 406 aaPredicted RBP11.38□□□□□ -0.59
SYN3-201ENST00000332840 TEX13BQ9BXU2 312 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 TCP11L1Q9NUJ3 509 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 LIMCH1Q9UPQ0 1083 aa11.38□□□□□ -0.59
SYN3-201ENST00000332840 FARP1Q9Y4F1 1045 aaPredicted RBP11.38□□□□□ -0.59
SYN3-201ENST00000332840 RPTORQ8N122 1335 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 ATP2A1O14983 1001 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 PLA2G6O60733 806 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 ZBED4O75132 1171 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 FCER1AP12319 257 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 BMP3P12645 472 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 ERCC3P19447 782 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 STAT3P40763 770 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 SLC1A4P43007 532 aa11.37□□□□□ -0.59
SYN3-201ENST00000332840 NOVP48745 357 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms