RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 IFFO2Q5TF58 517 aa19.2■□□□□ 0.66
C11orf88-201ENST00000332814 STOX1Q6ZVD7 989 aa19.2■□□□□ 0.66
C11orf88-201ENST00000332814 RASGRP2Q7LDG7 609 aa19.2■□□□□ 0.66
C11orf88-201ENST00000332814 CPXCR1Q8N123 301 aa19.2■□□□□ 0.66
C11orf88-201ENST00000332814 SH3TC2Q8TF17 1288 aa19.2■□□□□ 0.66
C11orf88-201ENST00000332814 TEX13BQ9BXU2 312 aa19.2■□□□□ 0.66
C11orf88-201ENST00000332814 PLA2G6O60733 806 aa19.19■□□□□ 0.66
C11orf88-201ENST00000332814 PDHBP11177 359 aa19.19■□□□□ 0.66
C11orf88-201ENST00000332814 CYP2B6P20813 491 aa19.19■□□□□ 0.66
C11orf88-201ENST00000332814 UBXN2AP68543 259 aa19.19■□□□□ 0.66
C11orf88-201ENST00000332814 WTAPQ15007 396 aa19.19■□□□□ 0.66
C11orf88-201ENST00000332814 SNRNP48Q6IEG0 339 aaKnown RBP19.19■□□□□ 0.66
C11orf88-201ENST00000332814 RIOX2Q8IUF8 465 aa19.19■□□□□ 0.66
C11orf88-201ENST00000332814 ANKS1AQ92625 1134 aa19.19■□□□□ 0.66
C11orf88-201ENST00000332814 ARMC5Q96C12 935 aa19.19■□□□□ 0.66
C11orf88-201ENST00000332814 GPCPD1Q9NPB8 672 aa19.19■□□□□ 0.66
C11orf88-201ENST00000332814 TAF6LQ9Y6J9 622 aa19.19■□□□□ 0.66
C11orf88-201ENST00000332814 SLC15A5A6NIM6 579 aa19.18■□□□□ 0.66
C11orf88-201ENST00000332814 PTPREP23469 700 aa19.18■□□□□ 0.66
C11orf88-201ENST00000332814 MCM5P33992 734 aa19.18■□□□□ 0.66
C11orf88-201ENST00000332814 OAZ1P54368 228 aa19.18■□□□□ 0.66
C11orf88-201ENST00000332814 KRT32Q14532 448 aa19.18■□□□□ 0.66
C11orf88-201ENST00000332814 TMEM67Q5HYA8 995 aa19.18■□□□□ 0.66
C11orf88-201ENST00000332814 GPATCH4Q5T3I0 446 aaKnown RBP19.18■□□□□ 0.66
C11orf88-201ENST00000332814 MB21D2Q8IYB1 491 aaPredicted RBP19.18■□□□□ 0.66
C11orf88-201ENST00000332814 PXYLP1Q8TE99 480 aa19.18■□□□□ 0.66
C11orf88-201ENST00000332814 TMEM106CQ9BVX2 250 aa19.18■□□□□ 0.66
C11orf88-201ENST00000332814 SLC38A10Q9HBR0 1119 aa19.18■□□□□ 0.66
C11orf88-201ENST00000332814 ZNF214Q9UL59 606 aaPredicted RBP19.18■□□□□ 0.66
C11orf88-201ENST00000332814 STRNO43815 780 aa19.17■□□□□ 0.66
C11orf88-201ENST00000332814 MYCP01106 439 aaPredicted RBP19.17■□□□□ 0.66
C11orf88-201ENST00000332814 PARP1P09874 1014 aaKnown RBP19.17■□□□□ 0.66
C11orf88-201ENST00000332814 ZNF543Q08ER8 600 aa19.17■□□□□ 0.66
C11orf88-201ENST00000332814 SYDE2Q5VT97 1194 aa19.17■□□□□ 0.66
C11orf88-201ENST00000332814 CHST3Q7LGC8 479 aa19.17■□□□□ 0.66
C11orf88-201ENST00000332814 REPS2Q8NFH8 660 aa19.17■□□□□ 0.66
C11orf88-201ENST00000332814 APBA2Q99767 749 aa19.17■□□□□ 0.66
C11orf88-201ENST00000332814 RAVER2Q9HCJ3 691 aaKnown RBP19.17■□□□□ 0.66
C11orf88-201ENST00000332814 SLC5A4Q9NY91 659 aa19.17■□□□□ 0.66
C11orf88-201ENST00000332814 PRR12Q9ULL5 1215 aa19.17■□□□□ 0.66
C11orf88-201ENST00000332814 RLFQ13129 1914 aa19.17■□□□□ 0.66
C11orf88-201ENST00000332814 PARP14Q460N5 1801 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 ATP2A1O14983 1001 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 PRC1O43663 620 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 FCER1AP12319 257 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 ELNP15502 786 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 SLC16A2P36021 539 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 MAP2K5Q13163 448 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 GRB14Q14449 540 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 KCTD2Q14681 263 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 SEC23AQ15436 765 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 ASPRV1Q53RT3 343 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 MORN1Q5T089 497 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 CCDC174Q6PII3 467 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 DPP9Q86TI2 863 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 TRMT44Q8IYL2 757 aaKnown RBP19.16■□□□□ 0.66
C11orf88-201ENST00000332814 ZNF333Q96JL9 665 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 MMP19Q99542 508 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 GJD2Q9UKL4 321 aa19.16■□□□□ 0.66
C11orf88-201ENST00000332814 DHX16O60231 1041 aaKnown RBP19.15■□□□□ 0.66
C11orf88-201ENST00000332814 EIF5BO60841 1220 aaKnown RBP19.15■□□□□ 0.66
C11orf88-201ENST00000332814 HMGCRP04035 888 aa19.15■□□□□ 0.66
C11orf88-201ENST00000332814 GOLGA8HP0CJ92 632 aa19.15■□□□□ 0.66
C11orf88-201ENST00000332814 SNHG28P0DPA3 235 aa19.15■□□□□ 0.66
C11orf88-201ENST00000332814 SOX10P56693 466 aa19.15■□□□□ 0.66
C11orf88-201ENST00000332814 TTBK2Q6IQ55 1244 aa19.15■□□□□ 0.66
C11orf88-201ENST00000332814 NFXL1Q6ZNB6 911 aa19.15■□□□□ 0.66
C11orf88-201ENST00000332814 TMEM87BQ96K49 555 aa19.15■□□□□ 0.66
C11orf88-201ENST00000332814 NEK1Q96PY6 1258 aa19.15■□□□□ 0.66
C11orf88-201ENST00000332814 MTA3Q9BTC8 594 aa19.15■□□□□ 0.66
C11orf88-201ENST00000332814 FBXO40Q9UH90 709 aa19.15■□□□□ 0.66
C11orf88-201ENST00000332814 INHAP05111 366 aa19.14■□□□□ 0.65
C11orf88-201ENST00000332814 XRCC5P13010 732 aaKnown RBP19.14■□□□□ 0.65
C11orf88-201ENST00000332814 ADORA2AP29274 412 aa19.14■□□□□ 0.65
C11orf88-201ENST00000332814 BTNL9Q6UXG8 535 aa19.14■□□□□ 0.65
C11orf88-201ENST00000332814 CATIPQ7Z7H3 387 aa19.14■□□□□ 0.65
C11orf88-201ENST00000332814 ABRAQ8N0Z2 381 aa19.14■□□□□ 0.65
C11orf88-201ENST00000332814 PNMA2Q9UL42 364 aa19.14■□□□□ 0.65
C11orf88-201ENST00000332814 CCDC69A6NI79 296 aa19.13■□□□□ 0.65
C11orf88-201ENST00000332814 EPB41L2O43491 1005 aaKnown RBP19.13■□□□□ 0.65
C11orf88-201ENST00000332814 ANTXR2P58335 489 aa19.13■□□□□ 0.65
C11orf88-201ENST00000332814 SNAP25P60880 206 aa19.13■□□□□ 0.65
C11orf88-201ENST00000332814 CHST13Q8NET6 341 aa19.13■□□□□ 0.65
C11orf88-201ENST00000332814 HOMER2Q9NSB8 354 aa19.13■□□□□ 0.65
C11orf88-201ENST00000332814 CCPG1Q9ULG6 757 aa19.13■□□□□ 0.65
C11orf88-201ENST00000332814 COL11A1P12107 1806 aaPredicted RBP19.12■□□□□ 0.65
C11orf88-201ENST00000332814 HMGB1P09429 215 aaKnown RBP19.12■□□□□ 0.65
C11orf88-201ENST00000332814 ALAS1P13196 640 aa19.12■□□□□ 0.65
C11orf88-201ENST00000332814 HSPA4P34932 840 aa19.12■□□□□ 0.65
C11orf88-201ENST00000332814 FGD1P98174 961 aa19.12■□□□□ 0.65
C11orf88-201ENST00000332814 TKFCQ3LXA3 575 aa19.12■□□□□ 0.65
C11orf88-201ENST00000332814 TMTC2Q8N394 836 aa19.12■□□□□ 0.65
C11orf88-201ENST00000332814 NUP133Q8WUM0 1156 aa19.12■□□□□ 0.65
C11orf88-201ENST00000332814 TRIB2Q92519 343 aa19.12■□□□□ 0.65
C11orf88-201ENST00000332814 USP6NLQ92738 828 aa19.12■□□□□ 0.65
C11orf88-201ENST00000332814 DDX11Q96FC9 970 aa19.12■□□□□ 0.65
C11orf88-201ENST00000332814 RANBP17Q9H2T7 1088 aaKnown RBP19.12■□□□□ 0.65
C11orf88-201ENST00000332814 ICAM1P05362 532 aa19.11■□□□□ 0.65
C11orf88-201ENST00000332814 TSGA10IPQ3SY00 556 aa19.11■□□□□ 0.65
C11orf88-201ENST00000332814 MFSD14CQ5VZR4 134 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms