RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 CCT8L2Q96SF2 557 aa27.16■■□□□ 1.94
SOX1-201ENST00000330949 TFR2Q9UP52 801 aa27.16■■□□□ 1.94
SOX1-201ENST00000330949 IFT88Q13099 833 aa27.16■■□□□ 1.94
SOX1-201ENST00000330949 CYB5R4Q7L1T6 521 aa27.16■■□□□ 1.94
SOX1-201ENST00000330949 NLRP14Q86W24 1093 aa27.16■■□□□ 1.94
SOX1-201ENST00000330949 PARP9Q8IXQ6 854 aa27.16■■□□□ 1.94
SOX1-201ENST00000330949 HINFPQ9BQA5 517 aa27.16■■□□□ 1.94
SOX1-201ENST00000330949 TRIM6Q9C030 488 aaPredicted RBP27.16■■□□□ 1.94
SOX1-201ENST00000330949 STIM2Q9P246 746 aa27.16■■□□□ 1.94
SOX1-201ENST00000330949 FAM107AO95990 144 aa27.15■■□□□ 1.94
SOX1-201ENST00000330949 KCTD16Q68DU8 428 aa27.15■■□□□ 1.94
SOX1-201ENST00000330949 CREG2Q8IUH2 290 aa27.15■■□□□ 1.94
SOX1-201ENST00000330949 EGFL6Q8IUX8 553 aa27.15■■□□□ 1.94
SOX1-201ENST00000330949 MYCBPAPQ8TBZ2 947 aa27.15■■□□□ 1.94
SOX1-201ENST00000330949 SNX12Q9UMY4 172 aa27.15■■□□□ 1.94
SOX1-201ENST00000330949 ATP2B2Q01814 1243 aa27.15■■□□□ 1.94
SOX1-201ENST00000330949 GUCY1A3Q02108 690 aa27.15■■□□□ 1.94
SOX1-201ENST00000330949 EZH2Q15910 746 aaKnown RBP27.15■■□□□ 1.94
SOX1-201ENST00000330949 CCDC114Q96M63 670 aa27.15■■□□□ 1.94
SOX1-201ENST00000330949 CASP1P29466 404 aa27.14■■□□□ 1.94
SOX1-201ENST00000330949 FAM217BQ9NTX9 383 aaPredicted RBP27.14■■□□□ 1.94
SOX1-201ENST00000330949 DDX20Q9UHI6 824 aaKnown RBP27.14■■□□□ 1.94
SOX1-201ENST00000330949 PAX7P23759 505 aa27.14■■□□□ 1.93
SOX1-201ENST00000330949 CASP7P55210 303 aa27.14■■□□□ 1.93
SOX1-201ENST00000330949 PAK1Q13153 545 aa27.14■■□□□ 1.93
SOX1-201ENST00000330949 PI16Q6UXB8 463 aa27.14■■□□□ 1.93
SOX1-201ENST00000330949 CCDC121Q6ZUS5 278 aa27.14■■□□□ 1.93
SOX1-201ENST00000330949 SPATA4Q8NEY3 305 aa27.14■■□□□ 1.93
SOX1-201ENST00000330949 PURBQ96QR8 312 aaKnown RBP27.14■■□□□ 1.93
SOX1-201ENST00000330949 A0A087X0B3 334 aa27.13■■□□□ 1.93
SOX1-201ENST00000330949 CLSTN1O94985 981 aa27.13■■□□□ 1.93
SOX1-201ENST00000330949 NR1D1P20393 614 aa27.13■■□□□ 1.93
SOX1-201ENST00000330949 WDR59Q6PJI9 974 aa27.13■■□□□ 1.93
SOX1-201ENST00000330949 SGMS1Q86VZ5 419 aa27.13■■□□□ 1.93
SOX1-201ENST00000330949 RBM28Q9NW13 759 aaKnown RBP27.13■■□□□ 1.93
SOX1-201ENST00000330949 CAPN11Q9UMQ6 739 aa27.13■■□□□ 1.93
SOX1-201ENST00000330949 KRT14P02533 472 aa27.13■■□□□ 1.93
SOX1-201ENST00000330949 IRX1P78414 480 aaPredicted RBP27.13■■□□□ 1.93
SOX1-201ENST00000330949 CYB5D1Q6P9G0 228 aa27.13■■□□□ 1.93
SOX1-201ENST00000330949 C6orf89Q6UWU4 347 aa27.13■■□□□ 1.93
SOX1-201ENST00000330949 LACRTQ9GZZ8 138 aa27.13■■□□□ 1.93
SOX1-201ENST00000330949 UBE2Q2LH0YL09 131 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 GPAA1O43292 621 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 VAV2P52735 878 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 CLNS1AP54105 237 aaKnown RBP27.12■■□□□ 1.93
SOX1-201ENST00000330949 RRAGBQ5VZM2 374 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 TSGA10Q9BZW7 698 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 PUS7LQ9H0K6 701 aaKnown RBP27.12■■□□□ 1.93
SOX1-201ENST00000330949 CWC25Q9NXE8 425 aaPredicted RBP27.12■■□□□ 1.93
SOX1-201ENST00000330949 KCNJ14Q9UNX9 436 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 PARP4Q9UKK3 1724 aaKnown RBP27.12■■□□□ 1.93
SOX1-201ENST00000330949 A0A1W2PQC6 194 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 SLC8A1P32418 973 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 CFAP58Q5T655 872 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 TRIM58Q8NG06 486 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 PRLRP16471 622 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 IFNAR1P17181 557 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 ADORA1P30542 326 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 KIF5AQ12840 1032 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 MEA1Q16626 185 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 TRIM22Q8IYM9 498 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 CCDC170Q8IYT3 715 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 SGSM3Q96HU1 749 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 EPSTI1Q96J88 318 aa27.12■■□□□ 1.93
SOX1-201ENST00000330949 TMEM94Q12767 1356 aa27.11■■□□□ 1.93
SOX1-201ENST00000330949 MDH1P40925 334 aaKnown RBP27.11■■□□□ 1.93
SOX1-201ENST00000330949 HDLBPQ00341 1268 aaKnown RBP27.11■■□□□ 1.93
SOX1-201ENST00000330949 ATP6V0A4Q9HBG4 840 aa27.11■■□□□ 1.93
SOX1-201ENST00000330949 SENP2Q9HC62 589 aa27.11■■□□□ 1.93
SOX1-201ENST00000330949 ZNHIT6Q9NWK9 470 aaKnown RBP27.11■■□□□ 1.93
SOX1-201ENST00000330949 FUKQ8N0W3 1084 aa27.11■■□□□ 1.93
SOX1-201ENST00000330949 SLC7A5Q01650 507 aa27.1■■□□□ 1.93
SOX1-201ENST00000330949 IQCKQ8N0W5 287 aa27.1■■□□□ 1.93
SOX1-201ENST00000330949 MB21D1Q8N884 522 aa27.1■■□□□ 1.93
SOX1-201ENST00000330949 DENND2AQ9ULE3 1009 aa27.1■■□□□ 1.93
SOX1-201ENST00000330949 MACROD2A1Z1Q3 448 aa27.1■■□□□ 1.93
SOX1-201ENST00000330949 COBLO75128 1261 aa27.1■■□□□ 1.93
SOX1-201ENST00000330949 TOM1L2Q6ZVM7 507 aa27.1■■□□□ 1.93
SOX1-201ENST00000330949 TBC1D10CQ8IV04 446 aa27.1■■□□□ 1.93
SOX1-201ENST00000330949 C1orf131Q8NDD1 294 aaKnown RBP27.1■■□□□ 1.93
SOX1-201ENST00000330949 IGDCC4Q8TDY8 1250 aa27.1■■□□□ 1.93
SOX1-201ENST00000330949 SLC12A7Q9Y666 1083 aa27.1■■□□□ 1.93
SOX1-201ENST00000330949 RCCD1A6NED2 376 aa27.09■■□□□ 1.93
SOX1-201ENST00000330949 IFFO1Q0D2I5 559 aa27.09■■□□□ 1.93
SOX1-201ENST00000330949 C11orf91Q3C1V1 193 aa27.09■■□□□ 1.93
SOX1-201ENST00000330949 MYL10Q9BUA6 226 aa27.09■■□□□ 1.93
SOX1-201ENST00000330949 LY9Q9HBG7 655 aa27.09■■□□□ 1.93
SOX1-201ENST00000330949 SCN11AQ9UI33 1791 aa27.09■■□□□ 1.93
SOX1-201ENST00000330949 CAMTA1Q9Y6Y1 1673 aa27.09■■□□□ 1.93
SOX1-201ENST00000330949 NR5A1Q13285 461 aa27.09■■□□□ 1.93
SOX1-201ENST00000330949 CD302Q8IX05 232 aa27.09■■□□□ 1.93
SOX1-201ENST00000330949 SYNE4Q8N205 404 aa27.09■■□□□ 1.93
SOX1-201ENST00000330949 C3orf20Q8ND61 904 aa27.09■■□□□ 1.93
SOX1-201ENST00000330949 SYMPKQ92797 1274 aaKnown RBP27.09■■□□□ 1.93
SOX1-201ENST00000330949 EPB41L3Q9Y2J2 1087 aaPredicted RBP27.09■■□□□ 1.93
SOX1-201ENST00000330949 SEC24CP53992 1094 aa27.08■■□□□ 1.93
SOX1-201ENST00000330949 TMEM67Q5HYA8 995 aa27.08■■□□□ 1.93
SOX1-201ENST00000330949 HAUS3Q68CZ6 603 aa27.08■■□□□ 1.93
SOX1-201ENST00000330949 NELFBQ8WX92 580 aa27.08■■□□□ 1.93
SOX1-201ENST00000330949 LGALS16A8MUM7 142 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms