RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 SIRT2Q8IXJ6 389 aa11.33□□□□□ -0.6
GDF3-201ENST00000329913 RNPC3Q96LT9 517 aaKnown RBP11.33□□□□□ -0.6
GDF3-201ENST00000329913 ARHGEF10LQ9HCE6 1279 aa11.33□□□□□ -0.6
GDF3-201ENST00000329913 PRDM6Q9NQX0 595 aa11.33□□□□□ -0.6
GDF3-201ENST00000329913 HOXC10Q9NYD6 342 aa11.33□□□□□ -0.6
GDF3-201ENST00000329913 MYH8P13535 1937 aa11.33□□□□□ -0.6
GDF3-201ENST00000329913 FCER1AP12319 257 aa11.32□□□□□ -0.6
GDF3-201ENST00000329913 SNX17Q15036 470 aa11.32□□□□□ -0.6
GDF3-201ENST00000329913 TSHZ3Q63HK5 1081 aa11.32□□□□□ -0.6
GDF3-201ENST00000329913 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
GDF3-201ENST00000329913 ERC1Q8IUD2 1116 aa11.32□□□□□ -0.6
GDF3-201ENST00000329913 SHCBP1Q8NEM2 672 aa11.32□□□□□ -0.6
GDF3-201ENST00000329913 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
GDF3-201ENST00000329913 PPM1EQ8WY54 764 aa11.32□□□□□ -0.6
GDF3-201ENST00000329913 MROH8Q9H579 483 aa11.32□□□□□ -0.6
GDF3-201ENST00000329913 PAG1Q9NWQ8 432 aa11.32□□□□□ -0.6
GDF3-201ENST00000329913 TMX2Q9Y320 296 aa11.32□□□□□ -0.6
GDF3-201ENST00000329913 SLC4A4Q9Y6R1 1079 aa11.32□□□□□ -0.6
GDF3-201ENST00000329913 PARP14Q460N5 1801 aa11.32□□□□□ -0.6
GDF3-201ENST00000329913 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 GRXCR1A8MXD5 290 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 ADCY6O43306 1168 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 STRNO43815 780 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 CLTBP09497 229 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 RARBP10826 455 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 ADD2P35612 726 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 GRIN2CQ14957 1233 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 TTF1Q15361 905 aaPredicted RBP11.31□□□□□ -0.6
GDF3-201ENST00000329913 CERS3Q8IU89 383 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 TINF2Q9BSI4 451 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
GDF3-201ENST00000329913 ZHX1Q9UKY1 873 aaPredicted RBP11.31□□□□□ -0.6
GDF3-201ENST00000329913 PHF24Q9UPV7 400 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 COG6Q9Y2V7 657 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 RIPK3Q9Y572 518 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 SYNRGQ9UMZ2 1314 aa11.31□□□□□ -0.6
GDF3-201ENST00000329913 VWA5AO00534 786 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 WDR46O15213 610 aaKnown RBP11.3□□□□□ -0.6
GDF3-201ENST00000329913 ZNF865P0CJ78 1059 aaPredicted RBP11.3□□□□□ -0.6
GDF3-201ENST00000329913 RAG1P15918 1043 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 PBX2P40425 430 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 STAT3P40763 770 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 KCTD2Q14681 263 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 ZNF792Q3KQV3 632 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 C12orf60Q5U649 245 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 SNRNP48Q6IEG0 339 aaKnown RBP11.3□□□□□ -0.6
GDF3-201ENST00000329913 CPXCR1Q8N123 301 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 CLASRPQ8N2M8 674 aaKnown RBP11.3□□□□□ -0.6
GDF3-201ENST00000329913 MB21D1Q8N884 522 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 REPS2Q8NFH8 660 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 PUS7LQ9H0K6 701 aaKnown RBP11.3□□□□□ -0.6
GDF3-201ENST00000329913 TMEM39AQ9NV64 488 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 SWAP70Q9UH65 585 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 RAPGEFL1Q9UHV5 662 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 PPP1R9AQ9ULJ8 1098 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 REV3LO60673 3130 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 CHD7Q9P2D1 2997 aa11.3□□□□□ -0.6
GDF3-201ENST00000329913 PLXNA1Q9UIW2 1896 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
GDF3-201ENST00000329913 ADAMTS4O75173 837 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 PRDM1O75626 825 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 ACRP10323 421 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 FAAP100Q0VG06 881 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 ERICH6BQ5W0A0 696 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 CTR9Q6PD62 1173 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 RIOX2Q8IUF8 465 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 FBXO22Q8NEZ5 403 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 KIF1BPQ96EK5 621 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 PPP1R12CQ9BZL4 782 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 HOMER2Q9NSB8 354 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 SLC5A4Q9NY91 659 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 ZNF214Q9UL59 606 aaPredicted RBP11.29□□□□□ -0.6
GDF3-201ENST00000329913 ISY1Q9ULR0 285 aaKnown RBP11.29□□□□□ -0.6
GDF3-201ENST00000329913 ZBED9Q6R2W3 1325 aa11.29□□□□□ -0.6
GDF3-201ENST00000329913 ZNFX1Q9P2E3 1918 aaKnown RBP11.29□□□□□ -0.6
GDF3-201ENST00000329913 XIRP2A4UGR9 3374 aa11.28□□□□□ -0.6
GDF3-201ENST00000329913 MINDY4BA8MYZ0 360 aa11.28□□□□□ -0.6
GDF3-201ENST00000329913 SNAI1O95863 264 aaPredicted RBP11.28□□□□□ -0.6
GDF3-201ENST00000329913 ACLYP53396 1101 aa11.28□□□□□ -0.6
GDF3-201ENST00000329913 SMAD3P84022 425 aaKnown RBP11.28□□□□□ -0.6
GDF3-201ENST00000329913 FPGSQ05932 587 aa11.28□□□□□ -0.6
GDF3-201ENST00000329913 RASGRP2Q7LDG7 609 aa11.28□□□□□ -0.6
GDF3-201ENST00000329913 RNF180Q86T96 592 aa11.28□□□□□ -0.6
GDF3-201ENST00000329913 ABRAQ8N0Z2 381 aa11.28□□□□□ -0.6
GDF3-201ENST00000329913 LRRC47Q8N1G4 583 aaKnown RBP11.28□□□□□ -0.6
GDF3-201ENST00000329913 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
GDF3-201ENST00000329913 SH2D4AQ9H788 454 aa11.28□□□□□ -0.6
GDF3-201ENST00000329913 RAVER2Q9HCJ3 691 aaKnown RBP11.28□□□□□ -0.6
GDF3-201ENST00000329913 STARD7Q9NQZ5 370 aa11.28□□□□□ -0.6
GDF3-201ENST00000329913 KIAA0355O15063 1070 aa11.27□□□□□ -0.61
GDF3-201ENST00000329913 IGSF3O75054 1194 aa11.27□□□□□ -0.61
GDF3-201ENST00000329913 SLC25A27O95847 323 aa11.27□□□□□ -0.61
GDF3-201ENST00000329913 NDUFB10O96000 172 aa11.27□□□□□ -0.61
GDF3-201ENST00000329913 AKR1A1P14550 325 aa11.27□□□□□ -0.61
GDF3-201ENST00000329913 RASA1P20936 1047 aa11.27□□□□□ -0.61
GDF3-201ENST00000329913 DNAJB2P25686 324 aa11.27□□□□□ -0.61
GDF3-201ENST00000329913 SNAP25P60880 206 aa11.27□□□□□ -0.61
GDF3-201ENST00000329913 BEX3Q00994 111 aa11.27□□□□□ -0.61
GDF3-201ENST00000329913 KCNA10Q16322 511 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms