RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 MYOZ2Q9NPC6 264 aa23.21■■□□□ 1.31
RIPPLY3-201ENST00000329553 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.2■■□□□ 1.3
RIPPLY3-201ENST00000329553 HERC5Q9UII4 1024 aaKnown RBP23.2■■□□□ 1.3
RIPPLY3-201ENST00000329553 TTBK2Q6IQ55 1244 aa23.2■■□□□ 1.3
RIPPLY3-201ENST00000329553 CCDC148Q8NFR7 591 aa23.2■■□□□ 1.3
RIPPLY3-201ENST00000329553 SEC63Q9UGP8 760 aaKnown RBP23.2■■□□□ 1.3
RIPPLY3-201ENST00000329553 FBXO2Q9UK22 296 aaPredicted RBP23.2■■□□□ 1.3
RIPPLY3-201ENST00000329553 CEP131Q9UPN4 1083 aa23.2■■□□□ 1.3
RIPPLY3-201ENST00000329553 MRVI1Q9Y6F6 885 aa23.2■■□□□ 1.3
RIPPLY3-201ENST00000329553 M0R2N6 131 aa23.19■■□□□ 1.3
RIPPLY3-201ENST00000329553 CTAGE5O15320 804 aa23.19■■□□□ 1.3
RIPPLY3-201ENST00000329553 MYO1BO43795 1136 aa23.19■■□□□ 1.3
RIPPLY3-201ENST00000329553 PTPREP23469 700 aa23.19■■□□□ 1.3
RIPPLY3-201ENST00000329553 TYRO3Q06418 890 aa23.19■■□□□ 1.3
RIPPLY3-201ENST00000329553 RBM26Q5T8P6 1007 aaKnown RBP23.19■■□□□ 1.3
RIPPLY3-201ENST00000329553 TMEM39BQ9GZU3 492 aa23.19■■□□□ 1.3
RIPPLY3-201ENST00000329553 ZNF202O95125 648 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 GH2P01242 217 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 ICA1Q05084 483 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 GRIN1Q05586 938 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 RESP18Q5W5W9 173 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 CDAN1Q8IWY9 1227 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 RASGRP4Q8TDF6 673 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 HPSEQ9Y251 543 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 GALNT17Q6IS24 598 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 KCTD1Q719H9 257 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 FAM83AQ86UY5 434 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 DAGLBQ8NCG7 672 aa23.18■■□□□ 1.3
RIPPLY3-201ENST00000329553 FAM237AA0A1B0GTK4 181 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 FZD9O00144 591 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 ZNF280AP59817 542 aaPredicted RBP23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 ZNF174Q15697 407 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 CCDC96Q2M329 555 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 TTC38Q5R3I4 469 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 GPATCH4Q5T3I0 446 aaKnown RBP23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 FAM177A1Q8N128 213 aaPredicted RBP23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 ZMYND12Q9H0C1 365 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 PCDHA6Q9UN73 950 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 PCDHA8Q9Y5H6 950 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 EGFRP00533 1210 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 RPS12P25398 132 aaKnown RBP23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 NAPAP54920 295 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 SDF4Q9BRK5 362 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 JMJD4Q9H9V9 463 aa23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 SRPRBQ9Y5M8 271 aaKnown RBP23.17■■□□□ 1.3
RIPPLY3-201ENST00000329553 SLC16A2P36021 539 aa23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 SPECC1Q5M775 1068 aa23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 ADGRF4Q8IZF3 695 aa23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 ARFGEF1Q9Y6D6 1849 aa23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 RAD21O60216 631 aa23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 SYKP43405 635 aa23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 TRAPPC10P48553 1259 aa23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 SLFN13Q68D06 897 aa23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 SASS6Q6UVJ0 657 aa23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 CCDC12Q8WUD4 166 aaPredicted RBP23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 PGAP2Q9UHJ9 254 aa23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 GJA3Q9Y6H8 435 aa23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 MORC2Q9Y6X9 1032 aaPredicted RBP23.16■■□□□ 1.3
RIPPLY3-201ENST00000329553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.15■■□□□ 1.3
RIPPLY3-201ENST00000329553 SMCO2A6NFE2 343 aa23.15■■□□□ 1.3
RIPPLY3-201ENST00000329553 GMPSP49915 693 aaPredicted RBP23.15■■□□□ 1.3
RIPPLY3-201ENST00000329553 UBE2Q2Q8WVN8 375 aa23.15■■□□□ 1.3
RIPPLY3-201ENST00000329553 SCAF8Q9UPN6 1271 aaKnown RBP23.15■■□□□ 1.3
RIPPLY3-201ENST00000329553 MMP14P50281 582 aa23.14■■□□□ 1.3
RIPPLY3-201ENST00000329553 ERCC4Q92889 916 aaPredicted RBP23.14■■□□□ 1.3
RIPPLY3-201ENST00000329553 SPON1Q9HCB6 807 aa23.14■■□□□ 1.3
RIPPLY3-201ENST00000329553 AP5Z1O43299 807 aa23.14■■□□□ 1.29
RIPPLY3-201ENST00000329553 SLC1A4P43007 532 aa23.14■■□□□ 1.29
RIPPLY3-201ENST00000329553 MIGA2Q7L4E1 593 aa23.14■■□□□ 1.29
RIPPLY3-201ENST00000329553 ZNF579Q8NAF0 562 aaKnown RBP23.14■■□□□ 1.29
RIPPLY3-201ENST00000329553 DCAF4Q8WV16 495 aa23.14■■□□□ 1.29
RIPPLY3-201ENST00000329553 CCDC194A0A1B0GVG4 234 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 F5H6K3 240 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 TBC1D12O60347 775 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 BMP15O95972 392 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 KLRC3Q07444 240 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 MICALL2Q8IY33 904 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 DPF2Q92785 391 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 COA7Q96BR5 231 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 C6orf50Q9HD87 102 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 USP17L10C9JJH3 530 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 PTGDRQ13258 359 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 SAMD7Q7Z3H4 446 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 TIGD1Q96MW7 591 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 ZNF830Q96NB3 372 aaPredicted RBP23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 CNOT7Q9UIV1 285 aaKnown RBP23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 KCNH3Q9ULD8 1083 aa23.13■■□□□ 1.29
RIPPLY3-201ENST00000329553 PNMA6FA0A0J9YX94 578 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 A0A1W2PRG0 241 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 GNA11P29992 359 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 ANO6Q4KMQ2 910 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 GMCL1P1Q8NEA9 526 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 CSRNP2Q9H175 543 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 UTRNP46939 3433 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 UQCRHLA0A096LP55 91 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 hCG_1984214I3L0E3 225 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 UQCRHP07919 91 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 MCM7P33993 719 aa23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 ZNF713Q8N859 430 aaPredicted RBP23.12■■□□□ 1.29
RIPPLY3-201ENST00000329553 FAM200AQ8TCP9 573 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms