RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 RNF146Q9NTX7 359 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 TBC1D7Q9P0N9 293 aa16.16■□□□□ 0.18
SYNGR1-203ENST00000328933 PFKFB2O60825 505 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 SNAPC2Q13487 334 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 CABP7Q86V35 215 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 PLCD3Q8N3E9 789 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 PRPF38AQ8NAV1 312 aaKnown RBP16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 NRBP2Q9NSY0 501 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 MAPK8IP1Q9UQF2 711 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 POLR2DO15514 142 aaKnown RBP16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 DNA2P51530 1060 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 CTR9Q6PD62 1173 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 CDAN1Q8IWY9 1227 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 ZFP91Q96JP5 570 aaPredicted RBP16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 NMT2O60551 498 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 LPXNO60711 386 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 STAT3P40763 770 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 RBM46Q8TBY0 533 aaKnown RBP16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 KCNH3Q9ULD8 1083 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 GSG1L2A8MUP6 293 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 CCP110O43303 1012 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 TNNT3P45378 269 aaPredicted RBP16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 DCAF17Q5H9S7 520 aaPredicted RBP16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 LRCH2Q5VUJ6 765 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 CDHR1Q96JP9 859 aa16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 RNF26Q9BY78 433 aaPredicted RBP16.15■□□□□ 0.18
SYNGR1-203ENST00000328933 FAM160B1Q5W0V3 765 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 ATL3Q6DD88 541 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 NOSTRINQ8IVI9 506 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 STK24Q9Y6E0 443 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 ANKRD62A6NC57 917 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 ZEB2O60315 1214 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 GALNT17Q6IS24 598 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 TAF4BQ92750 862 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 GBA2Q9HCG7 927 aaPredicted RBP16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 FRMD4BQ9Y2L6 1034 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 MAP2P11137 1827 aaKnown RBP16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 USP17L15C9J2P7 530 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 USP17L13C9JLJ4 530 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 USP17L11C9JVI0 530 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 USP17L18D6R9N7 530 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 USP17L22D6RA61 530 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 USP17L17D6RBQ6 530 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 USP17L19D6RCP7 530 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 USP17L20D6RJB6 530 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 YEATS4O95619 227 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 USP17L24Q0WX57 530 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 KIF1AQ12756 1690 aa16.14■□□□□ 0.17
SYNGR1-203ENST00000328933 SPAG1Q07617 926 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 FAM102BQ5T8I3 360 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 ZNF577Q9BSK1 485 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 RPAP3Q9H6T3 665 aaPredicted RBP16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 EXOC7Q9UPT5 735 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 NBPF9Q3BBW0 867 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 ZNF280CQ8ND82 737 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 RMDN3Q96TC7 470 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 ABCC12Q96J65 1359 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 PPM1FP49593 454 aaPredicted RBP16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 POLGP54098 1239 aaPredicted RBP16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 MYSM1Q5VVJ2 828 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 RSPH3Q86UC2 560 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 ZBTB8OSQ8IWT0 167 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 UPF1Q92900 1129 aaKnown RBP eCLIP16.13■□□□□ 0.177e-6■■■■□ 23.6
SYNGR1-203ENST00000328933 NT5C3AQ9H0P0 336 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 FLT1P17948 1338 aa16.13■□□□□ 0.17
SYNGR1-203ENST00000328933 TBC1D5Q92609 795 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 TMEM106CQ9BVX2 250 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 ZFYVE28Q9HCC9 887 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 SH2B2O14492 632 aaPredicted RBP16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 UBE2SQ16763 222 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 CLEC10AQ8IUN9 316 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 TBC1D10CQ8IV04 446 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 LRRIQ4A6NIV6 560 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 KIF4AO95239 1232 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 OR52Z1P0C646 297 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 FCER1AP12319 257 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 TRPC3Q13507 836 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 RCSD1Q6JBY9 416 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 SLFN12Q8IYM2 578 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 FEM1BQ9UK73 627 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 BICDL2A1A5D9 508 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 AKR1B10O60218 316 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 LIFRP42702 1097 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 ARID5AQ03989 594 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 C12orf60Q5U649 245 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 DCAF4Q8WV16 495 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 ATP6V0A1Q93050 837 aa16.12■□□□□ 0.17
SYNGR1-203ENST00000328933 GCNT3O95395 438 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 STAG1Q8WVM7 1258 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 PNMA6FA0A0J9YX94 578 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 CCND2P30279 289 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 SCRN1Q12765 414 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 ADPGKQ9BRR6 497 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 MRPL44Q9H9J2 332 aaKnown RBP16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 GRPEL1Q9HAV7 217 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 ELP1O95163 1332 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 CUTAO60888 179 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 CSPG5O95196 566 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 CCDC172P0C7W6 258 aa16.11■□□□□ 0.17
SYNGR1-203ENST00000328933 COG2Q14746 738 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms