RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 SHISA4Q96DD7 197 aa12.63□□□□□ -0.39
GINS3-202ENST00000328514 NAPBQ9H115 298 aa12.63□□□□□ -0.39
GINS3-202ENST00000328514 KCPQ6ZWJ8 1503 aa12.63□□□□□ -0.39
GINS3-202ENST00000328514 LOC102724159A0A0B4J2E5 919 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 SRGAP2O75044 1071 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 FSBPO95073 299 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 UQCRFS1P1P0C7P4 283 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 INPP5BP32019 993 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 LIG3P49916 1009 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 NNTQ13423 1086 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 PWP2Q15269 919 aaKnown RBP12.62□□□□□ -0.39
GINS3-202ENST00000328514 TSR1Q2NL82 804 aaKnown RBP12.62□□□□□ -0.39
GINS3-202ENST00000328514 CREG2Q8IUH2 290 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 CAVIN3Q969G5 261 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 MTRQ99707 1265 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 NUP58Q9BVL2 599 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 TSGA10Q9BZW7 698 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 THAP9Q9H5L6 903 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 TOMM22Q9NS69 142 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 SOS2Q07890 1332 aaPredicted RBP12.62□□□□□ -0.39
GINS3-202ENST00000328514 ALS2Q96Q42 1657 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 SRRM3A6NNA2 597 aaPredicted RBP12.62□□□□□ -0.39
GINS3-202ENST00000328514 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
GINS3-202ENST00000328514 PARP1P09874 1014 aaKnown RBP12.62□□□□□ -0.39
GINS3-202ENST00000328514 TRAPPC10P48553 1259 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 FNTAP49354 379 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 FUT2Q10981 343 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 PKN1Q16512 942 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 ZNF654Q8IZM8 581 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 C1orf131Q8NDD1 294 aaKnown RBP12.62□□□□□ -0.39
GINS3-202ENST00000328514 INCENPQ9NQS7 918 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 SNX12Q9UMY4 172 aa12.62□□□□□ -0.39
GINS3-202ENST00000328514 DOCK2Q92608 1830 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 PNPLA7Q6ZV29 1317 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 ERICH2A1L162 156 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 GSG1L2A8MUP6 293 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 PRPF3O43395 683 aaKnown RBP12.61□□□□□ -0.39
GINS3-202ENST00000328514 SRGNP10124 158 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 GNAT2P19087 354 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 DNM2P50570 870 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 EPHB4P54760 987 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 GNGT1P63211 74 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 CTDSPL2Q05D32 466 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 FIGNQ5HY92 759 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
GINS3-202ENST00000328514 METTL24Q5JXM2 366 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 KIAA1328Q86T90 577 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 ADSSL1Q8N142 457 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 TTLL11Q8NHH1 800 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 NOC3LQ8WTT2 800 aaKnown RBP12.61□□□□□ -0.39
GINS3-202ENST00000328514 IQCDQ96DY2 449 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 GNL3LQ9NVN8 582 aaKnown RBP12.61□□□□□ -0.39
GINS3-202ENST00000328514 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
GINS3-202ENST00000328514 GGA2Q9UJY4 613 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 RTL9Q8NET4 1388 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 MYH6P13533 1939 aa12.61□□□□□ -0.39
GINS3-202ENST00000328514 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 APBA1Q02410 837 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 KCNB1Q14721 858 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.6□□□□□ -0.39
GINS3-202ENST00000328514 ANKRD18AQ8IVF6 992 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 ZBTB38Q8NAP3 1195 aaPredicted RBP12.6□□□□□ -0.39
GINS3-202ENST00000328514 TRIM58Q8NG06 486 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 CAGE1Q8TC20 777 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 CAPZA3Q96KX2 299 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 ORAI2Q96SN7 254 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 LACRTQ9GZZ8 138 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 RNF41Q9H4P4 317 aaPredicted RBP12.6□□□□□ -0.39
GINS3-202ENST00000328514 MYH13Q9UKX3 1938 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 TNS2Q63HR2 1409 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 A0A1W2PQJ5 194 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 RCCD1A6NED2 376 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 ZMYND10O75800 440 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 IPO7O95373 1038 aaKnown RBP12.6□□□□□ -0.39
GINS3-202ENST00000328514 A1BGP04217 495 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 RPN1P04843 607 aaKnown RBP12.6□□□□□ -0.39
GINS3-202ENST00000328514 MYL1P05976 194 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 IDEP14735 1019 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 HNRNPH3P31942 346 aaKnown RBP12.6□□□□□ -0.39
GINS3-202ENST00000328514 PRCPP42785 496 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 VAV2P52735 878 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 ZBED6P86452 979 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 SEC23AQ15436 765 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 NPY5RQ15761 445 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 TTC38Q5R3I4 469 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 SND1Q7KZF4 910 aaKnown RBP eCLIP12.6□□□□□ -0.39
GINS3-202ENST00000328514 GSPT2Q8IYD1 628 aaKnown RBP12.6□□□□□ -0.39
GINS3-202ENST00000328514 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 COL16A1Q07092 1604 aaPredicted RBP12.6□□□□□ -0.39
GINS3-202ENST00000328514 ARAP2Q8WZ64 1704 aa12.6□□□□□ -0.39
GINS3-202ENST00000328514 SPATA31A6Q5VVP1 1343 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 TNS3Q68CZ2 1445 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 ERVV-2B6SEH9 535 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 PDE8BO95263 885 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 MAP2K2P36507 400 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 PTGDRQ13258 359 aa12.59□□□□□ -0.39
GINS3-202ENST00000328514 GLE1Q53GS7 698 aaKnown RBP12.59□□□□□ -0.39
GINS3-202ENST00000328514 ARL6IP4Q66PJ3 421 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms