RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ZNF70Q9UC06 446 aaPredicted RBP17.06■□□□□ 0.32
TPM3-205ENST00000328159 IQCB1Q15051 598 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 ELOA2Q8IYF1 753 aaPredicted RBP17.05■□□□□ 0.32
TPM3-205ENST00000328159 CEP57L1Q8IYX8 460 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 CNNM3Q8NE01 707 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 MKL1Q969V6 931 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 CLRN2A0PK11 232 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 SMCO2A6NFE2 343 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 TCP10L2B9ZVM9 353 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 EEF2P13639 858 aaKnown RBP17.05■□□□□ 0.32
TPM3-205ENST00000328159 MCM7P33993 719 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 CCDC96Q2M329 555 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 SHROOM1Q2M3G4 852 aaPredicted RBP17.05■□□□□ 0.32
TPM3-205ENST00000328159 SPDYE2Q495Y8 402 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 GPATCH4Q5T3I0 446 aaKnown RBP17.05■□□□□ 0.32
TPM3-205ENST00000328159 TMEM179Q6ZVK1 233 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 CSRNP1Q96S65 589 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 TAOK3Q9H2K8 898 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 CCDC39Q9UFE4 941 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 TUBE1Q9UJT0 475 aa17.05■□□□□ 0.32
TPM3-205ENST00000328159 ESYT2A0FGR8 921 aa17.04■□□□□ 0.32
TPM3-205ENST00000328159 ESPNB1AK53 854 aa17.04■□□□□ 0.32
TPM3-205ENST00000328159 GNA11P29992 359 aa17.04■□□□□ 0.32
TPM3-205ENST00000328159 NLRP12P59046 1061 aa17.04■□□□□ 0.32
TPM3-205ENST00000328159 CXCL9Q07325 125 aa17.04■□□□□ 0.32
TPM3-205ENST00000328159 SEPT2Q15019 361 aa17.04■□□□□ 0.32
TPM3-205ENST00000328159 R3HDM1Q15032 1099 aaKnown RBP17.04■□□□□ 0.32
TPM3-205ENST00000328159 ABCB5Q2M3G0 1257 aa17.04■□□□□ 0.32
TPM3-205ENST00000328159 USP49Q70CQ1 688 aa17.04■□□□□ 0.32
TPM3-205ENST00000328159 NAT10Q9H0A0 1025 aaKnown RBP17.04■□□□□ 0.32
TPM3-205ENST00000328159 PPP1R1BQ9UD71 204 aaPredicted RBP17.04■□□□□ 0.32
TPM3-205ENST00000328159 ARFGEF1Q9Y6D6 1849 aa17.03■□□□□ 0.32
TPM3-205ENST00000328159 POLR2DO15514 142 aaKnown RBP17.03■□□□□ 0.32
TPM3-205ENST00000328159 GDF11O95390 407 aa17.03■□□□□ 0.32
TPM3-205ENST00000328159 PNOCQ13519 176 aa17.03■□□□□ 0.32
TPM3-205ENST00000328159 TTBK2Q6IQ55 1244 aa17.03■□□□□ 0.32
TPM3-205ENST00000328159 KRT25Q7Z3Z0 450 aa17.03■□□□□ 0.32
TPM3-205ENST00000328159 ADGRF4Q8IZF3 695 aa17.03■□□□□ 0.32
TPM3-205ENST00000328159 MTMR14Q8NCE2 650 aa17.03■□□□□ 0.32
TPM3-205ENST00000328159 FAM151AQ8WW52 585 aa17.03■□□□□ 0.32
TPM3-205ENST00000328159 JMJD4Q9H9V9 463 aa17.03■□□□□ 0.32
TPM3-205ENST00000328159 SERTAD1Q9UHV2 236 aa17.03■□□□□ 0.32
TPM3-205ENST00000328159 HOOK1Q9UJC3 728 aaKnown RBP17.03■□□□□ 0.32
TPM3-205ENST00000328159 GOLGA6L19H0YKK7 550 aa17.02■□□□□ 0.32
TPM3-205ENST00000328159 BIN1O00499 593 aa17.02■□□□□ 0.32
TPM3-205ENST00000328159 PTMAP06454 111 aaKnown RBP17.02■□□□□ 0.32
TPM3-205ENST00000328159 ICA1Q05084 483 aa17.02■□□□□ 0.32
TPM3-205ENST00000328159 INF2Q27J81 1249 aa17.02■□□□□ 0.32
TPM3-205ENST00000328159 DPCR1Q3MIW9 517 aa17.02■□□□□ 0.32
TPM3-205ENST00000328159 CIAPIN1Q6FI81 312 aa17.02■□□□□ 0.32
TPM3-205ENST00000328159 SIAH1Q8IUQ4 282 aa17.02■□□□□ 0.32
TPM3-205ENST00000328159 DCAF4Q8WV16 495 aa17.02■□□□□ 0.32
TPM3-205ENST00000328159 SYMPKQ92797 1274 aaKnown RBP17.02■□□□□ 0.32
TPM3-205ENST00000328159 RRAGDQ9NQL2 400 aaPredicted RBP17.02■□□□□ 0.32
TPM3-205ENST00000328159 HERC5Q9UII4 1024 aaKnown RBP17.02■□□□□ 0.32
TPM3-205ENST00000328159 CNTNAP1P78357 1384 aa17.02■□□□□ 0.31
TPM3-205ENST00000328159 PNMA6FA0A0J9YX94 578 aa17.02■□□□□ 0.31
TPM3-205ENST00000328159 VWA3AA6NCI4 1184 aa17.02■□□□□ 0.31
TPM3-205ENST00000328159 MDM2Q00987 491 aaPredicted RBP17.02■□□□□ 0.31
TPM3-205ENST00000328159 RBM26Q5T8P6 1007 aaKnown RBP17.02■□□□□ 0.31
TPM3-205ENST00000328159 FKBP1CQ5VVH2 108 aa17.02■□□□□ 0.31
TPM3-205ENST00000328159 ARL6IP4Q66PJ3 421 aaKnown RBP17.02■□□□□ 0.31
TPM3-205ENST00000328159 KCTD1Q719H9 257 aa17.02■□□□□ 0.31
TPM3-205ENST00000328159 DHX40Q8IX18 779 aaKnown RBP17.02■□□□□ 0.31
TPM3-205ENST00000328159 PDILTQ8N807 584 aa17.02■□□□□ 0.31
TPM3-205ENST00000328159 C4orf32Q8N8J7 132 aa17.02■□□□□ 0.31
TPM3-205ENST00000328159 JDP2Q8WYK2 163 aa17.02■□□□□ 0.31
TPM3-205ENST00000328159 EPSTI1Q96J88 318 aa17.02■□□□□ 0.31
TPM3-205ENST00000328159 RTN4Q9NQC3 1192 aaKnown RBP17.02■□□□□ 0.31
TPM3-205ENST00000328159 CD2APQ9Y5K6 639 aa17.02■□□□□ 0.31
TPM3-205ENST00000328159 BECN2A8MW95 431 aa17.01■□□□□ 0.31
TPM3-205ENST00000328159 NFKBIEO00221 500 aa17.01■□□□□ 0.31
TPM3-205ENST00000328159 ACTN4O43707 911 aaKnown RBP17.01■□□□□ 0.31
TPM3-205ENST00000328159 RRP1BQ14684 758 aaKnown RBP17.01■□□□□ 0.31
TPM3-205ENST00000328159 SLFN13Q68D06 897 aa17.01■□□□□ 0.31
TPM3-205ENST00000328159 KANK3Q6NY19 840 aa17.01■□□□□ 0.31
TPM3-205ENST00000328159 PPP1R18Q6NYC8 613 aa17.01■□□□□ 0.31
TPM3-205ENST00000328159 ZSCAN30Q86W11 494 aa17.01■□□□□ 0.31
TPM3-205ENST00000328159 SGIP1Q9BQI5 828 aa17.01■□□□□ 0.31
TPM3-205ENST00000328159 BPIFA3Q9BQP9 254 aa17.01■□□□□ 0.31
TPM3-205ENST00000328159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.01■□□□□ 0.31
TPM3-205ENST00000328159 FOXN1O15353 648 aa17■□□□□ 0.31
TPM3-205ENST00000328159 GH2P01242 217 aa17■□□□□ 0.31
TPM3-205ENST00000328159 SLC16A2P36021 539 aa17■□□□□ 0.31
TPM3-205ENST00000328159 JAG1P78504 1218 aa17■□□□□ 0.31
TPM3-205ENST00000328159 POSTNQ15063 836 aa17■□□□□ 0.31
TPM3-205ENST00000328159 NONOQ15233 471 aaKnown RBP eCLIP17■□□□□ 0.311e-7■■■■□ 26.2
TPM3-205ENST00000328159 IL17AQ16552 155 aa17■□□□□ 0.31
TPM3-205ENST00000328159 COA7Q96BR5 231 aa17■□□□□ 0.31
TPM3-205ENST00000328159 MTMR8Q96EF0 704 aa17■□□□□ 0.31
TPM3-205ENST00000328159 ZBED3Q96IU2 234 aaPredicted RBP17■□□□□ 0.31
TPM3-205ENST00000328159 VEZTQ9HBM0 779 aa17■□□□□ 0.31
TPM3-205ENST00000328159 A0A087X0B3 334 aa17■□□□□ 0.31
TPM3-205ENST00000328159 USP17L10C9JJH3 530 aa17■□□□□ 0.31
TPM3-205ENST00000328159 RAD21O60216 631 aa17■□□□□ 0.31
TPM3-205ENST00000328159 SLC1A4P43007 532 aa17■□□□□ 0.31
TPM3-205ENST00000328159 ADCY7P51828 1080 aa17■□□□□ 0.31
TPM3-205ENST00000328159 REXO1Q8N1G1 1221 aaKnown RBP17■□□□□ 0.31
TPM3-205ENST00000328159 AOPEPQ8N6M6 819 aa17■□□□□ 0.31
TPM3-205ENST00000328159 GMCL1P1Q8NEA9 526 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms