RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 FOXR1Q6PIV2 292 aa22.36■■□□□ 1.17
CRLF3-201ENST00000324238 CEP112Q8N8E3 955 aa22.36■■□□□ 1.17
CRLF3-201ENST00000324238 NAA15Q9BXJ9 866 aaKnown RBP22.36■■□□□ 1.17
CRLF3-201ENST00000324238 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.36■■□□□ 1.17
CRLF3-201ENST00000324238 GOLGA8HP0CJ92 632 aa22.36■■□□□ 1.17
CRLF3-201ENST00000324238 TMTC1Q8IUR5 882 aa22.36■■□□□ 1.17
CRLF3-201ENST00000324238 EPN1Q9Y6I3 576 aaPredicted RBP22.36■■□□□ 1.17
CRLF3-201ENST00000324238 ANKRD65E5RJM6 399 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 MAP2K7O14733 419 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 INF2Q27J81 1249 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 CYP26C1Q6V0L0 522 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 LRRC15Q8TF66 581 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 AGPAT5Q9NUQ2 364 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 MCM9Q9NXL9 1143 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 LIMA1Q9UHB6 759 aaKnown RBP22.35■■□□□ 1.17
CRLF3-201ENST00000324238 GTPBP6O43824 516 aaPredicted RBP22.35■■□□□ 1.17
CRLF3-201ENST00000324238 CYP27A1Q02318 531 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 BRD3Q15059 726 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 PODXL2Q9NZ53 605 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 RWDD2AQ9UIY3 292 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 ANAPC4Q9UJX5 808 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 SRCAPQ6ZRS2 3230 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 B4DLN1 442 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 ATP8B1O43520 1251 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 DCP1AQ9NPI6 582 aaPredicted RBP22.35■■□□□ 1.17
CRLF3-201ENST00000324238 MYO6Q9UM54 1294 aa22.35■■□□□ 1.17
CRLF3-201ENST00000324238 TTF2Q9UNY4 1162 aaKnown RBP22.35■■□□□ 1.17
CRLF3-201ENST00000324238 LRRIQ3A6PVS8 624 aaPredicted RBP22.34■■□□□ 1.17
CRLF3-201ENST00000324238 TRIM66O15016 1216 aa22.34■■□□□ 1.17
CRLF3-201ENST00000324238 ATP1A1P05023 1023 aaKnown RBP22.34■■□□□ 1.17
CRLF3-201ENST00000324238 L1RE1Q9UN81 338 aa22.34■■□□□ 1.17
CRLF3-201ENST00000324238 USP17L3A6NCW0 530 aa22.34■■□□□ 1.17
CRLF3-201ENST00000324238 USP17L4A6NCW7 530 aa22.34■■□□□ 1.17
CRLF3-201ENST00000324238 ZNF185O15231 689 aa22.34■■□□□ 1.17
CRLF3-201ENST00000324238 NDUFA10O95299 355 aa22.34■■□□□ 1.17
CRLF3-201ENST00000324238 USP17L1Q7RTZ2 530 aa22.34■■□□□ 1.17
CRLF3-201ENST00000324238 SLC44A5Q8NCS7 719 aa22.34■■□□□ 1.17
CRLF3-201ENST00000324238 RIN2Q8WYP3 895 aaPredicted RBP22.34■■□□□ 1.17
CRLF3-201ENST00000324238 DISP2A7MBM2 1401 aa22.34■■□□□ 1.17
CRLF3-201ENST00000324238 RCCD1A6NED2 376 aa22.33■■□□□ 1.17
CRLF3-201ENST00000324238 ZNF658Q5TYW1 1059 aaPredicted RBP22.33■■□□□ 1.17
CRLF3-201ENST00000324238 NBPF5PQ86XG9 351 aaPredicted RBP22.33■■□□□ 1.17
CRLF3-201ENST00000324238 BBXQ8WY36 941 aaPredicted RBP22.33■■□□□ 1.17
CRLF3-201ENST00000324238 TRIM47Q96LD4 638 aa22.33■■□□□ 1.17
CRLF3-201ENST00000324238 PCMTD1Q96MG8 357 aaPredicted RBP22.33■■□□□ 1.17
CRLF3-201ENST00000324238 MMS19Q96T76 1030 aa22.33■■□□□ 1.17
CRLF3-201ENST00000324238 RBM28Q9NW13 759 aaKnown RBP22.33■■□□□ 1.17
CRLF3-201ENST00000324238 ZNF652Q9Y2D9 606 aa22.33■■□□□ 1.17
CRLF3-201ENST00000324238 CASP8Q14790 479 aa22.33■■□□□ 1.16
CRLF3-201ENST00000324238 DIXDC1Q155Q3 683 aa22.33■■□□□ 1.16
CRLF3-201ENST00000324238 NAALADL2Q58DX5 795 aa22.33■■□□□ 1.16
CRLF3-201ENST00000324238 HDXQ7Z353 690 aa22.33■■□□□ 1.16
CRLF3-201ENST00000324238 SPATA31A1Q5TZJ5 1347 aa22.33■■□□□ 1.16
CRLF3-201ENST00000324238 GPS2Q13227 327 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 FKBP15Q5T1M5 1219 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 AMIGO3Q86WK7 504 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 TXLNBQ8N3L3 684 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 ANKRD20A12PQ8NF67 263 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 DRC1Q96MC2 740 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 TNNT3P45378 269 aaPredicted RBP22.32■■□□□ 1.16
CRLF3-201ENST00000324238 RPS8P62241 208 aaKnown RBP22.32■■□□□ 1.16
CRLF3-201ENST00000324238 TFAP4Q01664 338 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 CCDC122Q5T0U0 273 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.32■■□□□ 1.16
CRLF3-201ENST00000324238 HEATR3Q7Z4Q2 680 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 NSUN4Q96CB9 384 aaKnown RBP22.32■■□□□ 1.16
CRLF3-201ENST00000324238 LACRTQ9GZZ8 138 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 SAP30BPQ9UHR5 308 aaKnown RBP22.32■■□□□ 1.16
CRLF3-201ENST00000324238 RCSD1Q6JBY9 416 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 SMCR8Q8TEV9 937 aaPredicted RBP22.32■■□□□ 1.16
CRLF3-201ENST00000324238 AK7Q96M32 723 aa22.32■■□□□ 1.16
CRLF3-201ENST00000324238 MACROD2A1Z1Q3 448 aa22.31■■□□□ 1.16
CRLF3-201ENST00000324238 FAM193AP78312 1265 aa22.31■■□□□ 1.16
CRLF3-201ENST00000324238 PFKFB3Q16875 520 aaPredicted RBP22.31■■□□□ 1.16
CRLF3-201ENST00000324238 BLIDQ8IZY5 108 aa22.31■■□□□ 1.16
CRLF3-201ENST00000324238 LUC7L2Q9Y383 392 aaKnown RBP22.31■■□□□ 1.16
CRLF3-201ENST00000324238 HIBADHP31937 336 aaKnown RBP22.31■■□□□ 1.16
CRLF3-201ENST00000324238 HERVK_113P62684 666 aa22.31■■□□□ 1.16
CRLF3-201ENST00000324238 WDR59Q6PJI9 974 aa22.31■■□□□ 1.16
CRLF3-201ENST00000324238 MB21D1Q8N884 522 aa22.31■■□□□ 1.16
CRLF3-201ENST00000324238 PSMB7Q99436 277 aa22.31■■□□□ 1.16
CRLF3-201ENST00000324238 BSDC1Q9NW68 430 aaPredicted RBP22.31■■□□□ 1.16
CRLF3-201ENST00000324238 LRRC10BA6NIK2 292 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 GRIK5Q16478 980 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 SLC35G1Q2M3R5 365 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 C10orf67Q8IYJ2 551 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 C4orf32Q8N8J7 132 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 RCAN1P53805 252 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 KRT26Q7Z3Y9 468 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 MSANTD4Q8NCY6 345 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 UIMC1Q96RL1 719 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 BRIP1Q9BX63 1249 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 ANKIB1Q9P2G1 1089 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 RAB21Q9UL25 225 aa22.3■■□□□ 1.16
CRLF3-201ENST00000324238 GNPATO15228 680 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 BMP15O95972 392 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 UBA7P41226 1012 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 UBE4AQ14139 1066 aa22.29■■□□□ 1.16
CRLF3-201ENST00000324238 MYH14Q7Z406 1995 aaKnown RBP22.29■■□□□ 1.16
CRLF3-201ENST00000324238 DZIP1Q86YF9 867 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms