RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 SPRED2Q7Z698 418 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 MSLNLQ96KJ4 702 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 C12orf42Q96LP6 360 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 MYD88Q99836 296 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 FAM184BQ9ULE4 1060 aa8.35□□□□□ -1.07
CSTF3-201ENST00000323959 CFAP47Q6ZTR5 3102 aa8.34□□□□□ -1.07
CSTF3-201ENST00000323959 H3BNC9 293 aa8.34□□□□□ -1.07
CSTF3-201ENST00000323959 AOC1P19801 751 aa8.34□□□□□ -1.07
CSTF3-201ENST00000323959 CCDC84Q86UT8 332 aaPredicted RBP8.34□□□□□ -1.07
CSTF3-201ENST00000323959 SUMF1Q8NBK3 374 aa8.34□□□□□ -1.07
CSTF3-201ENST00000323959 VTI1AQ96AJ9 217 aa8.34□□□□□ -1.07
CSTF3-201ENST00000323959 KIF12Q96FN5 646 aa8.34□□□□□ -1.07
CSTF3-201ENST00000323959 ZBED2Q9BTP6 218 aa8.34□□□□□ -1.07
CSTF3-201ENST00000323959 NPM3O75607 178 aaKnown RBP8.34□□□□□ -1.07
CSTF3-201ENST00000323959 MTMR2Q13614 643 aa8.34□□□□□ -1.07
CSTF3-201ENST00000323959 MTMR3Q13615 1198 aa8.34□□□□□ -1.07
CSTF3-201ENST00000323959 ADAM32Q8TC27 787 aa8.34□□□□□ -1.07
CSTF3-201ENST00000323959 CEP250Q9BV73 2442 aa8.34□□□□□ -1.07
CSTF3-201ENST00000323959 ANKRD18BA2A2Z9 1011 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 SRRM3A6NNA2 597 aaPredicted RBP8.33□□□□□ -1.08
CSTF3-201ENST00000323959 COBLO75128 1261 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 ASGR1P07306 291 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 CSF1RP07333 972 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 CAP2P40123 477 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 GJA9P57773 515 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 MROH8Q9H579 483 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 USP40Q9NVE5 1235 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 SPTLC1O15269 473 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 TAF5LO75529 589 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 KRT38O76015 456 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 SUPT20HL2P0C7V6 817 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 RGS3P49796 1198 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 FBXO33Q7Z6M2 555 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 DCLK2Q8N568 766 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 SP7Q8TDD2 431 aaPredicted RBP8.33□□□□□ -1.08
CSTF3-201ENST00000323959 FAM84BQ96KN1 310 aaPredicted RBP8.33□□□□□ -1.08
CSTF3-201ENST00000323959 CFAP53Q96M91 514 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 CRBNQ96SW2 442 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 MFSD1Q9H3U5 465 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 SORCS3Q9UPU3 1222 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 ATG2AQ2TAZ0 1938 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 GPM6BQ13491 265 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 SH3BP5LQ7L8J4 393 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 ZBTB33Q86T24 672 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 CRACR2BQ8N4Y2 399 aaPredicted RBP8.33□□□□□ -1.08
CSTF3-201ENST00000323959 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
CSTF3-201ENST00000323959 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.33□□□□□ -1.08
CSTF3-201ENST00000323959 NDUFB9Q9Y6M9 179 aa8.33□□□□□ -1.08
CSTF3-201ENST00000323959 TBX10O75333 385 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 GJB5O95377 273 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 WDR5P61964 334 aaKnown RBP8.32□□□□□ -1.08
CSTF3-201ENST00000323959 HYAL1Q12794 435 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 ADAM15Q13444 863 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 CLUL1Q15846 466 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 VARS2Q5ST30 1063 aaKnown RBP8.32□□□□□ -1.08
CSTF3-201ENST00000323959 CWF19L1Q69YN2 538 aaKnown RBP8.32□□□□□ -1.08
CSTF3-201ENST00000323959 SMRP1Q8NCR6 262 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 GLIS3Q8NEA6 775 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 R4GN57 208 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 USP17L10C9JJH3 530 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 SCLYQ96I15 445 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 TINF2Q9BSI4 451 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 CNPY2Q9Y2B0 182 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 XIRP2A4UGR9 3374 aa8.32□□□□□ -1.08
CSTF3-201ENST00000323959 KIF16BQ96L93 1317 aa8.31□□□□□ -1.08
CSTF3-201ENST00000323959 EIF4E1BA6NMX2 242 aaKnown RBP8.31□□□□□ -1.08
CSTF3-201ENST00000323959 SNAP23O00161 211 aa8.31□□□□□ -1.08
CSTF3-201ENST00000323959 KINO60870 393 aaKnown RBP8.31□□□□□ -1.08
CSTF3-201ENST00000323959 CCDC27Q2M243 656 aa8.31□□□□□ -1.08
CSTF3-201ENST00000323959 ZSCAN29Q8IWY8 852 aaPredicted RBP8.31□□□□□ -1.08
CSTF3-201ENST00000323959 SMCHD1A6NHR9 2005 aa8.31□□□□□ -1.08
CSTF3-201ENST00000323959 PITPNM1O00562 1244 aa8.31□□□□□ -1.08
CSTF3-201ENST00000323959 MAP4K4O95819 1239 aaPredicted RBP8.31□□□□□ -1.08
CSTF3-201ENST00000323959 NEFMP07197 916 aa8.31□□□□□ -1.08
CSTF3-201ENST00000323959 CHAF1AQ13111 956 aaPredicted RBP8.31□□□□□ -1.08
CSTF3-201ENST00000323959 LRRFIP1Q32MZ4 808 aaKnown RBP8.31□□□□□ -1.08
CSTF3-201ENST00000323959 KREMEN2Q8NCW0 462 aa8.31□□□□□ -1.08
CSTF3-201ENST00000323959 MTUS1Q9ULD2 1270 aa8.31□□□□□ -1.08
CSTF3-201ENST00000323959 DNAH12Q6ZR08 3092 aa8.31□□□□□ -1.08
CSTF3-201ENST00000323959 SCN5AQ14524 2016 aa8.31□□□□□ -1.08
CSTF3-201ENST00000323959 NAV2Q8IVL1 2488 aa8.3□□□□□ -1.08
CSTF3-201ENST00000323959 PARNO95453 639 aaKnown RBP8.3□□□□□ -1.08
CSTF3-201ENST00000323959 ASNSP08243 561 aa8.3□□□□□ -1.08
CSTF3-201ENST00000323959 RBM25P49756 843 aaKnown RBP8.3□□□□□ -1.08
CSTF3-201ENST00000323959 RRP1P56182 461 aaKnown RBP8.3□□□□□ -1.08
CSTF3-201ENST00000323959 HDGFL1Q5TGJ6 251 aa8.3□□□□□ -1.08
CSTF3-201ENST00000323959 DEFB128Q7Z7B8 93 aa8.3□□□□□ -1.08
CSTF3-201ENST00000323959 PPP2R3CQ969Q6 453 aa8.3□□□□□ -1.08
CSTF3-201ENST00000323959 BTBD7Q9P203 1132 aa8.3□□□□□ -1.08
CSTF3-201ENST00000323959 MYH13Q9UKX3 1938 aa8.3□□□□□ -1.08
CSTF3-201ENST00000323959 FSD2A1L4K1 749 aa8.3□□□□□ -1.08
CSTF3-201ENST00000323959 FOXD2O60548 495 aaPredicted RBP8.3□□□□□ -1.08
CSTF3-201ENST00000323959 GYG1P46976 350 aa8.3□□□□□ -1.08
CSTF3-201ENST00000323959 CC2D1BQ5T0F9 858 aaKnown RBP8.3□□□□□ -1.08
CSTF3-201ENST00000323959 CATSPERGQ6ZRH7 1159 aa8.3□□□□□ -1.08
CSTF3-201ENST00000323959 USP15Q9Y4E8 981 aaPredicted RBP8.3□□□□□ -1.08
CSTF3-201ENST00000323959 INSL6Q9Y581 213 aa8.3□□□□□ -1.08
CSTF3-201ENST00000323959 OTOGLQ3ZCN5 2332 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 H7C1W4 665 aa8.29□□□□□ -1.08
CSTF3-201ENST00000323959 B4GALT4O60513 344 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms