RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 CYTH3O43739 400 aa25.28■■□□□ 1.64
PNKP-201ENST00000322344 BBOX1O75936 387 aa25.28■■□□□ 1.64
PNKP-201ENST00000322344 MYL1P05976 194 aa25.28■■□□□ 1.64
PNKP-201ENST00000322344 STAT6P42226 847 aa25.28■■□□□ 1.64
PNKP-201ENST00000322344 IGSF22Q8N9C0 903 aa25.28■■□□□ 1.64
PNKP-201ENST00000322344 SLC44A5Q8NCS7 719 aa25.28■■□□□ 1.64
PNKP-201ENST00000322344 TBC1D22AQ8WUA7 517 aa25.28■■□□□ 1.64
PNKP-201ENST00000322344 STAMQ92783 540 aa25.28■■□□□ 1.64
PNKP-201ENST00000322344 MTRQ99707 1265 aa25.28■■□□□ 1.64
PNKP-201ENST00000322344 DISC1Q9NRI5 854 aa25.28■■□□□ 1.64
PNKP-201ENST00000322344 LIMA1Q9UHB6 759 aaKnown RBP25.28■■□□□ 1.64
PNKP-201ENST00000322344 SAP30BPQ9UHR5 308 aaKnown RBP25.28■■□□□ 1.64
PNKP-201ENST00000322344 TEX33O43247 280 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 RPN1P04843 607 aaKnown RBP25.27■■□□□ 1.64
PNKP-201ENST00000322344 SMARCA1P28370 1054 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 PRPHP41219 470 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 CDK8P49336 464 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 PAK1Q13153 545 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 SLC35G1Q2M3R5 365 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 GJD4Q96KN9 370 aaPredicted RBP25.27■■□□□ 1.64
PNKP-201ENST00000322344 GPR101Q96P66 508 aaPredicted RBP25.27■■□□□ 1.64
PNKP-201ENST00000322344 EYA3Q99504 573 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 PODXL2Q9NZ53 605 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.27■■□□□ 1.64
PNKP-201ENST00000322344 ELF2Q15723 593 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 SLC51AQ86UW1 340 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 ANKRD20A12PQ8NF67 263 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 RASGRP4Q8TDF6 673 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 CCDC51Q96ER9 411 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 OGFRQ9NZT2 677 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 SNED1Q8TER0 1413 aa25.27■■□□□ 1.64
PNKP-201ENST00000322344 CCSER1Q9C0I3 900 aa25.26■■□□□ 1.63
PNKP-201ENST00000322344 LRRC10BA6NIK2 292 aa25.25■■□□□ 1.63
PNKP-201ENST00000322344 KLRF2D3W0D1 207 aa25.25■■□□□ 1.63
PNKP-201ENST00000322344 KRT25Q7Z3Z0 450 aa25.25■■□□□ 1.63
PNKP-201ENST00000322344 ZMYND12Q9H0C1 365 aa25.25■■□□□ 1.63
PNKP-201ENST00000322344 FLT1P17948 1338 aa25.25■■□□□ 1.63
PNKP-201ENST00000322344 DDX60LQ5H9U9 1706 aaKnown RBP25.25■■□□□ 1.63
PNKP-201ENST00000322344 SERPINB2P05120 415 aa25.25■■□□□ 1.63
PNKP-201ENST00000322344 TPM1P09493 284 aa25.25■■□□□ 1.63
PNKP-201ENST00000322344 PARP1P09874 1014 aaKnown RBP25.25■■□□□ 1.63
PNKP-201ENST00000322344 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.25■■□□□ 1.63
PNKP-201ENST00000322344 V9GYY5 206 aaPredicted RBP25.25■■□□□ 1.63
PNKP-201ENST00000322344 GAKO14976 1311 aa25.25■■□□□ 1.63
PNKP-201ENST00000322344 GYS1P13807 737 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 CBX1P83916 185 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 KARSQ15046 597 aaKnown RBP25.24■■□□□ 1.63
PNKP-201ENST00000322344 INF2Q27J81 1249 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 TOGARAM2Q6ZUX3 1019 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 CNGA4Q8IV77 575 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 LRRC4BQ9NT99 713 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 BAZ2BQ9UIF8 2168 aaKnown RBP25.24■■□□□ 1.63
PNKP-201ENST00000322344 HOXA10P31260 410 aaPredicted RBP25.24■■□□□ 1.63
PNKP-201ENST00000322344 UBA7P41226 1012 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 RBL2Q08999 1139 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 KCNB1Q14721 858 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 NELFBQ8WX92 580 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 CUEDC2Q9H467 287 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 MAGEF1Q9HAY2 307 aa25.24■■□□□ 1.63
PNKP-201ENST00000322344 MFAP3LO75121 409 aa25.23■■□□□ 1.63
PNKP-201ENST00000322344 CCDC175P0C221 793 aa25.23■■□□□ 1.63
PNKP-201ENST00000322344 GNA11P29992 359 aa25.23■■□□□ 1.63
PNKP-201ENST00000322344 RHBDL3P58872 404 aa25.23■■□□□ 1.63
PNKP-201ENST00000322344 AK8Q96MA6 479 aa25.23■■□□□ 1.63
PNKP-201ENST00000322344 C6orf50Q9HD87 102 aa25.23■■□□□ 1.63
PNKP-201ENST00000322344 DDX41Q9UJV9 622 aaKnown RBP25.23■■□□□ 1.63
PNKP-201ENST00000322344 ONECUT3O60422 494 aaPredicted RBP25.22■■□□□ 1.63
PNKP-201ENST00000322344 CASQ1P31415 396 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 NOVP48745 357 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 KRT31Q15323 416 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 KMT5BQ4FZB7 885 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 MFSD14BQ5SR56 506 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 TMC4Q7Z404 712 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 RRP36Q96EU6 259 aaKnown RBP25.22■■□□□ 1.63
PNKP-201ENST00000322344 CRAMP1Q96RY5 1269 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 TMEM60Q9H2L4 133 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 URI1O94763 535 aaPredicted RBP25.22■■□□□ 1.63
PNKP-201ENST00000322344 NAPAP54920 295 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 ORC2Q13416 577 aaPredicted RBP25.22■■□□□ 1.63
PNKP-201ENST00000322344 TRIM14Q14142 442 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 RASSF8Q8NHQ8 419 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 PARP3Q9Y6F1 533 aa25.22■■□□□ 1.63
PNKP-201ENST00000322344 CDK5RAP2Q96SN8 1893 aa25.21■■□□□ 1.63
PNKP-201ENST00000322344 H7C1D1 291 aa25.21■■□□□ 1.63
PNKP-201ENST00000322344 FECHP22830 423 aa25.21■■□□□ 1.63
PNKP-201ENST00000322344 GNG11P61952 73 aa25.21■■□□□ 1.63
PNKP-201ENST00000322344 MNS1Q8NEH6 495 aa25.21■■□□□ 1.63
PNKP-201ENST00000322344 TBC1D16Q8TBP0 767 aa25.21■■□□□ 1.63
PNKP-201ENST00000322344 MTMR7Q9Y216 660 aa25.21■■□□□ 1.63
PNKP-201ENST00000322344 N4BP3O15049 544 aa25.2■■□□□ 1.63
PNKP-201ENST00000322344 GOLGA8HP0CJ92 632 aa25.2■■□□□ 1.63
PNKP-201ENST00000322344 COPB1P53618 953 aaKnown RBP25.2■■□□□ 1.63
PNKP-201ENST00000322344 NONOQ15233 471 aaKnown RBP eCLIP25.2■■□□□ 1.63
PNKP-201ENST00000322344 NAALADL2Q58DX5 795 aa25.2■■□□□ 1.63
PNKP-201ENST00000322344 FBXO38Q6PIJ6 1188 aa25.2■■□□□ 1.63
PNKP-201ENST00000322344 SEC63Q9UGP8 760 aaKnown RBP25.2■■□□□ 1.63
PNKP-201ENST00000322344 SPDYE4A6NLX3 237 aa25.2■■□□□ 1.62
PNKP-201ENST00000322344 hCG_1984214I3L0E3 225 aa25.2■■□□□ 1.62
PNKP-201ENST00000322344 CDC25AP30304 524 aa25.2■■□□□ 1.62
PNKP-201ENST00000322344 ERCC6LQ2NKX8 1250 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms