RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TOGARAM2Q6ZUX3 1019 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ARHGAP18Q8N392 663 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 NCOA5Q9HCD5 579 aaKnown RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 NUP205Q92621 2012 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ECM29Q5VYK3 1845 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 EIF3HO15372 352 aaKnown RBP eCLIP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 THAP12O43422 761 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ZWINTO95229 277 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 NAIF1Q69YI7 327 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ZNF274Q96GC6 653 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 FMO2Q99518 471 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 EPS15L1Q9UBC2 864 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 DCTN3O75935 186 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 TBC1D8O95759 1140 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 RFC1P35251 1148 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 GNAQP50148 359 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 C2orf54Q08AI8 447 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 C10orf76Q5T2E6 689 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 CCDC13Q8IYE1 715 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ABTB1Q969K4 478 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 HVCN1Q96D96 273 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 SBNO2Q9Y2G9 1366 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ERVK-7P63135 1459 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 FBXW10Q5XX13 1052 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 TMEM87BQ96K49 555 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 TRIM31Q9BZY9 425 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ATP7BP35670 1465 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ERCC5P28715 1186 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 GNPTABQ3T906 1256 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 SWT1Q5T5J6 900 aaKnown RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 CCDC105Q8IYK2 499 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 CUL5Q93034 780 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 TUBB6Q9BUF5 446 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 NSFL1CQ9UNZ2 370 aaKnown RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 PARP4Q9UKK3 1724 aaKnown RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ZMYM6O95789 1325 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ITFG2Q969R8 447 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 SYNCQ9H7C4 482 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 TXNDC16Q9P2K2 825 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 AMFRQ9UKV5 643 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 PALD1Q9ULE6 856 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 HSPA1LP34931 641 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 SPATA1Q5VX52 437 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 TSPYL6Q8N831 410 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 PPP4R1Q8TF05 950 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ATP2A3Q93084 1043 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 MPHOSPH6Q99547 160 aaKnown RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 ABCF2Q9UG63 623 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 SLC8A3P57103 927 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 TRMT44Q8IYL2 757 aaKnown RBP7.74□□□□□ -1.17
SMC1A-201ENST00000322213 ASIC3Q9UHC3 531 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 ADGRB2O60241 1585 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 MEFVO15553 781 aaPredicted RBP7.74□□□□□ -1.17
SMC1A-201ENST00000322213 EEF1GP26641 437 aaKnown RBP7.74□□□□□ -1.17
SMC1A-201ENST00000322213 FAM133BQ5BKY9 247 aaKnown RBP7.74□□□□□ -1.17
SMC1A-201ENST00000322213 EP400NLQ6ZTU2 488 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 TAB2Q9NYJ8 693 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 BZW2Q9Y6E2 419 aaKnown RBP7.74□□□□□ -1.17
SMC1A-201ENST00000322213 KCNK3O14649 394 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 GMNNO75496 209 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 PDHA1P08559 390 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 STRN3Q13033 797 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 SV2BQ7L1I2 683 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 NME9Q86XW9 330 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 H7C1D1 291 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 SPOPO43791 374 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 GNA11P29992 359 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 CASP14P31944 242 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 HEATR3Q7Z4Q2 680 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 GRK7Q8WTQ7 553 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 OSBPL9Q96SU4 736 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 ITGB1BP2Q9UKP3 347 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 TUBGCP6Q96RT7 1819 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 PASKQ96RG2 1323 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 EEF2P13639 858 aaKnown RBP7.74□□□□□ -1.17
SMC1A-201ENST00000322213 SERPINB6P35237 376 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 FAM173BQ6P4H8 233 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 KLHL29Q96CT2 875 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 CARD14Q9BXL6 1004 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 DMRT2Q9Y5R5 561 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 SART1O43290 800 aaKnown RBP7.74□□□□□ -1.17
SMC1A-201ENST00000322213 MYSM1Q5VVJ2 828 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 TXNDC2Q86VQ3 553 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 FLT4P35916 1363 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 ZMYND10O75800 440 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 KRT15P19012 456 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 SCP2P22307 547 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 CUL3Q13618 768 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 PPP2R5BQ15173 497 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 DCAF17Q5H9S7 520 aaPredicted RBP7.74□□□□□ -1.17
SMC1A-201ENST00000322213 BEND3Q5T5X7 828 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 ACBD5Q5T8D3 534 aaPredicted RBP7.74□□□□□ -1.17
SMC1A-201ENST00000322213 PPP4R3AQ6IN85 833 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 NOSTRINQ8IVI9 506 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 AFAP1L2Q8N4X5 818 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 CHAMP1Q96JM3 812 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 LSG1Q9H089 658 aaKnown RBP7.74□□□□□ -1.17
SMC1A-201ENST00000322213 UGGT1Q9NYU2 1555 aa7.74□□□□□ -1.17
SMC1A-201ENST00000322213 KCNH5Q8NCM2 988 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms