RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 ADGRF4Q8IZF3 695 aa15.76■□□□□ 0.11
PRPF18-201ENST00000320054 CCDC82Q8N4S0 544 aa15.76■□□□□ 0.11
PRPF18-201ENST00000320054 FAM184AQ8NB25 1140 aa15.76■□□□□ 0.11
PRPF18-201ENST00000320054 MTMR8Q96EF0 704 aa15.76■□□□□ 0.11
PRPF18-201ENST00000320054 RRP36Q96EU6 259 aaKnown RBP15.76■□□□□ 0.11
PRPF18-201ENST00000320054 DDX11Q96FC9 970 aa15.76■□□□□ 0.11
PRPF18-201ENST00000320054 UBA5Q9GZZ9 404 aa15.76■□□□□ 0.11
PRPF18-201ENST00000320054 RPAP3Q9H6T3 665 aaPredicted RBP15.76■□□□□ 0.11
PRPF18-201ENST00000320054 JMJD4Q9H9V9 463 aa15.76■□□□□ 0.11
PRPF18-201ENST00000320054 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.76■□□□□ 0.11
PRPF18-201ENST00000320054 ISY1Q9ULR0 285 aaKnown RBP15.76■□□□□ 0.11
PRPF18-201ENST00000320054 V9GY48 417 aaPredicted RBP15.76■□□□□ 0.11
PRPF18-201ENST00000320054 USP17L15C9J2P7 530 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 USP17L13C9JLJ4 530 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 USP17L11C9JVI0 530 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 USP17L18D6R9N7 530 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 USP17L22D6RA61 530 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 USP17L17D6RBQ6 530 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 USP17L19D6RCP7 530 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 USP17L20D6RJB6 530 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 PDCP20941 246 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 SLC16A2P36021 539 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 GTF2A2P52657 109 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 USP17L24Q0WX57 530 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 DGKZQ13574 1117 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 MOGSQ13724 837 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 PKN1Q16512 942 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 PFKFB3Q16875 520 aaPredicted RBP15.75■□□□□ 0.11
PRPF18-201ENST00000320054 RASAL3Q86YV0 1011 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 PRPF38AQ8NAV1 312 aaKnown RBP15.75■□□□□ 0.11
PRPF18-201ENST00000320054 CPVLQ9H3G5 476 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 PRR12Q9ULL5 1215 aa15.75■□□□□ 0.11
PRPF18-201ENST00000320054 MYPNQ86TC9 1320 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 SMCHD1A6NHR9 2005 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 DTNBO60941 627 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 FDX1P10109 184 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 CETPP11597 493 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 HOXA7P31268 230 aaPredicted RBP15.74■□□□□ 0.11
PRPF18-201ENST00000320054 ZNF157P51786 506 aaPredicted RBP15.74■□□□□ 0.11
PRPF18-201ENST00000320054 IKQ13123 557 aaPredicted RBP15.74■□□□□ 0.11
PRPF18-201ENST00000320054 GADL1Q6ZQY3 521 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 CATSPERGQ6ZRH7 1159 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 FAM177A1Q8N128 213 aaPredicted RBP15.74■□□□□ 0.11
PRPF18-201ENST00000320054 MS4A4AQ96JQ5 239 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 SLF1Q9BQI6 1058 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 TANGO6Q9C0B7 1094 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 CIZ1Q9ULV3 898 aaPredicted RBP15.74■□□□□ 0.11
PRPF18-201ENST00000320054 AGTPBP1Q9UPW5 1226 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 MYH15Q9Y2K3 1946 aa15.74■□□□□ 0.11
PRPF18-201ENST00000320054 RBBP6Q7Z6E9 1792 aaKnown RBP15.73■□□□□ 0.11
PRPF18-201ENST00000320054 PNMA6FA0A0J9YX94 578 aa15.73■□□□□ 0.11
PRPF18-201ENST00000320054 hCG_1984214I3L0E3 225 aa15.73■□□□□ 0.11
PRPF18-201ENST00000320054 PPFIA3O75145 1194 aa15.73■□□□□ 0.11
PRPF18-201ENST00000320054 SLC10A3P09131 477 aa15.73■□□□□ 0.11
PRPF18-201ENST00000320054 SCG2P13521 617 aa15.73■□□□□ 0.11
PRPF18-201ENST00000320054 PABPC4Q13310 644 aaKnown RBP eCLIP15.73■□□□□ 0.11
PRPF18-201ENST00000320054 ZNF713Q8N859 430 aaPredicted RBP15.73■□□□□ 0.11
PRPF18-201ENST00000320054 CCDC102AQ96A19 550 aa15.73■□□□□ 0.11
PRPF18-201ENST00000320054 PIGSQ96S52 555 aa15.73■□□□□ 0.11
PRPF18-201ENST00000320054 ALG1Q9BT22 464 aa15.73■□□□□ 0.11
PRPF18-201ENST00000320054 VAT1LQ9HCJ6 419 aa15.73■□□□□ 0.11
PRPF18-201ENST00000320054 FBXO28Q9NVF7 368 aa15.73■□□□□ 0.11
PRPF18-201ENST00000320054 SEC63Q9UGP8 760 aaKnown RBP15.73■□□□□ 0.11
PRPF18-201ENST00000320054 PPP1R9AQ9ULJ8 1098 aa15.73■□□□□ 0.11
PRPF18-201ENST00000320054 ABT1Q9ULW3 272 aaKnown RBP15.73■□□□□ 0.11
PRPF18-201ENST00000320054 ZBTB5O15062 677 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 FLOT1O75955 427 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 SYT1P21579 422 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 APLP1P51693 650 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 COG2Q14746 738 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 TREML2Q5T2D2 321 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 LARP1BQ659C4 914 aaKnown RBP15.72■□□□□ 0.11
PRPF18-201ENST00000320054 KIFC2Q96AC6 838 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 RANBP17Q9H2T7 1088 aaKnown RBP15.72■□□□□ 0.11
PRPF18-201ENST00000320054 SH3GLB2Q9NR46 395 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 CREBZFQ9NS37 354 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 HOXC10Q9NYD6 342 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 ADAMTS5Q9UNA0 930 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 SLC45A1Q9Y2W3 748 aa15.72■□□□□ 0.11
PRPF18-201ENST00000320054 hCG_1642624A0A1W2PR95 340 aa15.71■□□□□ 0.11
PRPF18-201ENST00000320054 TESPA1A2RU30 521 aaPredicted RBP15.71■□□□□ 0.11
PRPF18-201ENST00000320054 XBP1P17861 261 aa15.71■□□□□ 0.11
PRPF18-201ENST00000320054 DSG3P32926 999 aa15.71■□□□□ 0.11
PRPF18-201ENST00000320054 TRAF1Q13077 416 aa15.71■□□□□ 0.11
PRPF18-201ENST00000320054 CDC37Q16543 378 aaPredicted RBP15.71■□□□□ 0.11
PRPF18-201ENST00000320054 QRICH1Q2TAL8 776 aa15.71■□□□□ 0.11
PRPF18-201ENST00000320054 GPAT2Q6NUI2 795 aa15.71■□□□□ 0.11
PRPF18-201ENST00000320054 HOMER1Q86YM7 354 aa15.71■□□□□ 0.11
PRPF18-201ENST00000320054 C8orf76Q96K31 380 aa15.71■□□□□ 0.11
PRPF18-201ENST00000320054 PNMA2Q9UL42 364 aa15.71■□□□□ 0.11
PRPF18-201ENST00000320054 CCL15-CCL14A0A0B4J2E2 113 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 MANSC4A6NHS7 340 aaPredicted RBP15.7■□□□□ 0.1
PRPF18-201ENST00000320054 FAM155AB1AL88 458 aaPredicted RBP15.7■□□□□ 0.1
PRPF18-201ENST00000320054 STX6O43752 255 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 NUCB2P80303 420 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 TRIM29Q14134 588 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 CCL15Q16663 113 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 PPP1R18Q6NYC8 613 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 ANKRD23Q86SG2 305 aa15.7■□□□□ 0.1
PRPF18-201ENST00000320054 FBXO18Q8NFZ0 1043 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms