RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 KIAA1755Q5JYT7 1200 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 NOL9Q5SY16 702 aaKnown RBP36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 GALNT17Q6IS24 598 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 KRT26Q7Z3Y9 468 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 DAGLBQ8NCG7 672 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 TNFRSF25Q93038 417 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 NUP88Q99567 741 aaPredicted RBP36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 RTEL1Q9NZ71 1219 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 OTOFQ9HC10 1997 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 PNMA6FA0A0J9YX94 578 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 SLC16A2P36021 539 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 NR5A1Q13285 461 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 KLHL40Q2TBA0 621 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 CCDC84Q86UT8 332 aaPredicted RBP36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 CCDC12Q8WUD4 166 aaPredicted RBP36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 POLR3EQ9NVU0 708 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 RCOR1Q9UKL0 485 aa36.03■■■■□ 3.36
NECTIN3-201ENST00000319792 PNMA8AQ86V59 439 aaPredicted RBP36.02■■■■□ 3.36
NECTIN3-201ENST00000319792 USP17L10C9JJH3 530 aa36.01■■■■□ 3.36
NECTIN3-201ENST00000319792 WDR18Q9BV38 432 aa36.01■■■■□ 3.36
NECTIN3-201ENST00000319792 KIAA1683Q9H0B3 1180 aa36.01■■■■□ 3.36
NECTIN3-201ENST00000319792 ISY1Q9ULR0 285 aaKnown RBP36.01■■■■□ 3.36
NECTIN3-201ENST00000319792 DDX49Q9Y6V7 483 aaKnown RBP36.01■■■■□ 3.36
NECTIN3-201ENST00000319792 ZBTB5O15062 677 aa36■■■■□ 3.35
NECTIN3-201ENST00000319792 GADD45BO75293 160 aaPredicted RBP36■■■■□ 3.35
NECTIN3-201ENST00000319792 MBD3O95983 291 aa36■■■■□ 3.35
NECTIN3-201ENST00000319792 NASPP49321 788 aaPredicted RBP36■■■■□ 3.35
NECTIN3-201ENST00000319792 UBE2HP62256 183 aa36■■■■□ 3.35
NECTIN3-201ENST00000319792 SPICE1Q8N0Z3 855 aa36■■■■□ 3.35
NECTIN3-201ENST00000319792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP36■■■■□ 3.35
NECTIN3-201ENST00000319792 FTOQ9C0B1 505 aaKnown RBP eCLIP36■■■■□ 3.35
NECTIN3-201ENST00000319792 PCDHA4Q9UN74 947 aa36■■■■□ 3.35
NECTIN3-201ENST00000319792 ESYT2A0FGR8 921 aa35.99■■■■□ 3.35
NECTIN3-201ENST00000319792 GPT2Q8TD30 523 aa35.99■■■■□ 3.35
NECTIN3-201ENST00000319792 ZMYND12Q9H0C1 365 aa35.99■■■■□ 3.35
NECTIN3-201ENST00000319792 TMEM232C9JQI7 657 aa35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 PLA2G6O60733 806 aa35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 USP2O75604 605 aaPredicted RBP35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 YEATS4O95619 227 aa35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 SYDE2Q5VT97 1194 aa35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 PPP1R18Q6NYC8 613 aa35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 ZKSCAN4Q969J2 545 aaPredicted RBP35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 FEZ1Q99689 392 aa35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 PICK1Q9NRD5 415 aa35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 PTPRAP18433 802 aa35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 NAPAP54920 295 aa35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 BLIDQ8IZY5 108 aa35.98■■■■□ 3.35
NECTIN3-201ENST00000319792 RILPL1Q5EBL4 403 aa35.97■■■■□ 3.35
NECTIN3-201ENST00000319792 FAM83BQ5T0W9 1011 aa35.97■■■■□ 3.35
NECTIN3-201ENST00000319792 ANO1Q5XXA6 986 aa35.97■■■■□ 3.35
NECTIN3-201ENST00000319792 LPAR1Q92633 364 aa35.97■■■■□ 3.35
NECTIN3-201ENST00000319792 AS3MTQ9HBK9 375 aa35.97■■■■□ 3.35
NECTIN3-201ENST00000319792 FZD1Q9UP38 647 aa35.97■■■■□ 3.35
NECTIN3-201ENST00000319792 M0R2N6 131 aa35.96■■■■□ 3.35
NECTIN3-201ENST00000319792 PPP1R11O60927 126 aaPredicted RBP35.96■■■■□ 3.35
NECTIN3-201ENST00000319792 CDCA5Q96FF9 252 aa35.96■■■■□ 3.35
NECTIN3-201ENST00000319792 CLIC4Q9Y696 253 aa35.96■■■■□ 3.35
NECTIN3-201ENST00000319792 STAT2P52630 851 aa35.95■■■■□ 3.35
NECTIN3-201ENST00000319792 CEBPZQ03701 1054 aaKnown RBP35.95■■■■□ 3.35
NECTIN3-201ENST00000319792 EAPPQ56P03 285 aaPredicted RBP35.95■■■■□ 3.35
NECTIN3-201ENST00000319792 DLK2Q6UY11 383 aa35.95■■■■□ 3.35
NECTIN3-201ENST00000319792 LINC00301Q8NCQ3 95 aa35.95■■■■□ 3.35
NECTIN3-201ENST00000319792 TOB1P50616 345 aaPredicted RBP35.94■■■■□ 3.34
NECTIN3-201ENST00000319792 ZYXQ15942 572 aaKnown RBP35.94■■■■□ 3.34
NECTIN3-201ENST00000319792 CDC37Q16543 378 aaPredicted RBP35.94■■■■□ 3.34
NECTIN3-201ENST00000319792 QRICH1Q2TAL8 776 aa35.94■■■■□ 3.34
NECTIN3-201ENST00000319792 PPP1R12BO60237 982 aaPredicted RBP35.93■■■■□ 3.34
NECTIN3-201ENST00000319792 C6orf50Q9HD87 102 aa35.93■■■■□ 3.34
NECTIN3-201ENST00000319792 ADAMTS3O15072 1205 aa35.93■■■■□ 3.34
NECTIN3-201ENST00000319792 WDR46O15213 610 aaKnown RBP35.93■■■■□ 3.34
NECTIN3-201ENST00000319792 GNA11P29992 359 aa35.93■■■■□ 3.34
NECTIN3-201ENST00000319792 USP14P54578 494 aa35.93■■■■□ 3.34
NECTIN3-201ENST00000319792 EARS2Q5JPH6 523 aaKnown RBP35.93■■■■□ 3.34
NECTIN3-201ENST00000319792 FAM160B2Q86V87 743 aa35.93■■■■□ 3.34
NECTIN3-201ENST00000319792 CHURC1Q8WUH1 139 aa35.93■■■■□ 3.34
NECTIN3-201ENST00000319792 PRR12Q9ULL5 1215 aa35.93■■■■□ 3.34
NECTIN3-201ENST00000319792 SMCO2A6NFE2 343 aa35.92■■■■□ 3.34
NECTIN3-201ENST00000319792 MAP3K9P80192 1104 aa35.92■■■■□ 3.34
NECTIN3-201ENST00000319792 IKQ13123 557 aaPredicted RBP35.92■■■■□ 3.34
NECTIN3-201ENST00000319792 ZNF280CQ8ND82 737 aa35.92■■■■□ 3.34
NECTIN3-201ENST00000319792 KCNG4Q8TDN1 519 aa35.92■■■■□ 3.34
NECTIN3-201ENST00000319792 COA7Q96BR5 231 aa35.92■■■■□ 3.34
NECTIN3-201ENST00000319792 FEM1BQ9UK73 627 aa35.92■■■■□ 3.34
NECTIN3-201ENST00000319792 NF2P35240 595 aa35.91■■■■□ 3.34
NECTIN3-201ENST00000319792 STK38Q15208 465 aa35.91■■■■□ 3.34
NECTIN3-201ENST00000319792 PPP1R3FQ6ZSY5 799 aaPredicted RBP35.91■■■■□ 3.34
NECTIN3-201ENST00000319792 PGBD1Q96JS3 809 aa35.91■■■■□ 3.34
NECTIN3-201ENST00000319792 PARP14Q460N5 1801 aa35.9■■■■□ 3.34
NECTIN3-201ENST00000319792 FAM205CA6NFA0 338 aa35.9■■■■□ 3.34
NECTIN3-201ENST00000319792 SLC39A14Q15043 492 aa35.9■■■■□ 3.34
NECTIN3-201ENST00000319792 PTPAQ15257 358 aa35.9■■■■□ 3.34
NECTIN3-201ENST00000319792 SF3A1Q15459 793 aaKnown RBP35.9■■■■□ 3.34
NECTIN3-201ENST00000319792 PCDHA6Q9UN73 950 aa35.9■■■■□ 3.34
NECTIN3-201ENST00000319792 PCDHA8Q9Y5H6 950 aa35.9■■■■□ 3.34
NECTIN3-201ENST00000319792 BACE1P56817 501 aa35.89■■■■□ 3.34
NECTIN3-201ENST00000319792 SPP2Q13103 211 aa35.89■■■■□ 3.34
NECTIN3-201ENST00000319792 MTMR2Q13614 643 aa35.89■■■■□ 3.34
NECTIN3-201ENST00000319792 PRKG1Q13976 671 aa35.89■■■■□ 3.34
NECTIN3-201ENST00000319792 BICD2Q8TD16 824 aa35.89■■■■□ 3.34
NECTIN3-201ENST00000319792 NOL7Q9UMY1 257 aaKnown RBP35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms