RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 TRIM47Q96LD4 638 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 SLC4A9Q96Q91 983 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 SAR1BQ9Y6B6 198 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 GUCY1A3Q02108 690 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 FBXL16Q8N461 479 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 SPATA20Q8TB22 786 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 CRACR2AQ9BSW2 395 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 PRDM11Q9NQV5 511 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 ATP8B1O43520 1251 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 KRT2P35908 639 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 SLC20A2Q08357 652 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 CCDC178Q5BJE1 867 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 TRAPPC11Q7Z392 1133 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 GOLGA6L1Q8N7Z2 621 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 OR2W6PQ8NHA6 318 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 FAM71BQ8TC56 605 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 DACH1Q9UI36 760 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 GOLGA6CA6NDK9 693 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 RPN1P04843 607 aaKnown RBP10.79□□□□□ -0.68
RPGR-201ENST00000318842 GOLGA6DP0CG33 693 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 ERCC5P28715 1186 aaPredicted RBP10.79□□□□□ -0.68
RPGR-201ENST00000318842 MAGEA9P43362 315 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 NAP1L1P55209 391 aaKnown RBP10.79□□□□□ -0.68
RPGR-201ENST00000318842 CORO7P57737 925 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 NLRP5P59047 1200 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 STAG2Q8N3U4 1231 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 FOXP1Q9H334 677 aaPredicted RBP10.79□□□□□ -0.68
RPGR-201ENST00000318842 LRRC4CQ9HCJ2 640 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 GOLGA6AQ9NYA3 693 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 MYH10P35580 1976 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 SIPA1L3O60292 1781 aaPredicted RBP10.79□□□□□ -0.68
RPGR-201ENST00000318842 IRAK1P51617 712 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 KIF6Q6ZMV9 814 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 ZBTB38Q8NAP3 1195 aaPredicted RBP10.79□□□□□ -0.68
RPGR-201ENST00000318842 PIGBQ92521 554 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 FAM212AQ96EL1 285 aa10.79□□□□□ -0.68
RPGR-201ENST00000318842 LUC7L2Q9Y383 392 aaKnown RBP10.79□□□□□ -0.68
RPGR-201ENST00000318842 GOLGA6BA6NDN3 693 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 LRRC41Q15345 812 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 TTMPQ5BVD1 217 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 IFIT1BQ5T764 474 aaKnown RBP10.78□□□□□ -0.68
RPGR-201ENST00000318842 PDXDC2PQ6P474 469 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 KCNV1Q6PIU1 500 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 BICDL1Q6ZP65 573 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 SH3RF1Q7Z6J0 888 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 HNRNPLLQ8WVV9 542 aaKnown RBP10.78□□□□□ -0.68
RPGR-201ENST00000318842 NHEJ1Q9H9Q4 299 aaPredicted RBP10.78□□□□□ -0.68
RPGR-201ENST00000318842 TTF2Q9UNY4 1162 aaKnown RBP10.78□□□□□ -0.68
RPGR-201ENST00000318842 FAM169AQ9Y6X4 670 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 MST1RQ04912 1400 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 TUBB4AP04350 444 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 HPDP32754 393 aaPredicted RBP10.78□□□□□ -0.68
RPGR-201ENST00000318842 STAT6P42226 847 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 INF2Q27J81 1249 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 NBPF9Q3BBW0 867 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 TMTC1Q8IUR5 882 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 CD248Q9HCU0 757 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 OVOS2A0A0G2JMS6 1433 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 FRMD3A2A2Y4 597 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 USP17L12C9JPN9 530 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 USP17L21D6R901 530 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 MAP3K12Q12852 859 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 UBE3CQ15386 1083 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 WHAMMP3Q1A5X7 153 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 C2CD5Q86YS7 1000 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 MB21D1Q8N884 522 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 SLC39A2Q9NP94 309 aa10.78□□□□□ -0.68
RPGR-201ENST00000318842 AATFQ9NY61 560 aaKnown RBP eCLIP10.78□□□□□ -0.68
RPGR-201ENST00000318842 TJP1Q07157 1748 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 FTCDO95954 541 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 LIFRP42702 1097 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 MNAT1P51948 309 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 STK4Q13043 487 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 MKRN4PQ13434 485 aaPredicted RBP10.77□□□□□ -0.69
RPGR-201ENST00000318842 SPRED3Q2MJR0 410 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 DYMQ7RTS9 669 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 SLC44A5Q8NCS7 719 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 DYNLL2Q96FJ2 89 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 PHF20Q9BVI0 1012 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 VAT1LQ9HCJ6 419 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 NLRC4Q9NPP4 1024 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 TBC1D7Q9P0N9 293 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 AKAP11Q9UKA4 1901 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 CSF1RP07333 972 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 PIP4K2BP78356 416 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 FUT2Q10981 343 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 NAALADL2Q58DX5 795 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 OR8K1Q8NGG5 319 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 ZNF384Q8TF68 577 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 RBM12Q9NTZ6 932 aaKnown RBP10.77□□□□□ -0.69
RPGR-201ENST00000318842 TMOD3Q9NYL9 352 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 TFCP2L1Q9NZI6 479 aa10.77□□□□□ -0.69
RPGR-201ENST00000318842 ARHGAP23Q9P227 1491 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 MYO1BO43795 1136 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 PPFIA4O75335 1185 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 IVLP07476 585 aa10.76□□□□□ -0.69
RPGR-201ENST00000318842 TRHP20396 242 aaPredicted RBP10.76□□□□□ -0.69
RPGR-201ENST00000318842 CARSP49589 748 aaKnown RBP10.76□□□□□ -0.69
RPGR-201ENST00000318842 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms