RNA–Protein interactions for RNA: ENST00000315616.11

RPUSD2-201, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPUSD2, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-201ENST00000315616 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
RPUSD2-201ENST00000315616 LZTS2Q9BRK4 669 aa16.78■□□□□ 0.28
RPUSD2-201ENST00000315616 SPZ1Q9BXG8 430 aa16.78■□□□□ 0.28
RPUSD2-201ENST00000315616 KCNQ5Q9NR82 932 aa16.78■□□□□ 0.28
RPUSD2-201ENST00000315616 SERPINC1P01008 464 aa16.77■□□□□ 0.28
RPUSD2-201ENST00000315616 PARP1P09874 1014 aaKnown RBP16.77■□□□□ 0.28
RPUSD2-201ENST00000315616 DPYDQ12882 1025 aa16.77■□□□□ 0.28
RPUSD2-201ENST00000315616 TRMT44Q8IYL2 757 aaKnown RBP16.77■□□□□ 0.28
RPUSD2-201ENST00000315616 DAGLBQ8NCG7 672 aa16.77■□□□□ 0.28
RPUSD2-201ENST00000315616 STAMQ92783 540 aa16.77■□□□□ 0.28
RPUSD2-201ENST00000315616 C16orf45Q96MC5 204 aaPredicted RBP16.77■□□□□ 0.28
RPUSD2-201ENST00000315616 PARP3Q9Y6F1 533 aa16.77■□□□□ 0.28
RPUSD2-201ENST00000315616 ADAMTSL1Q8N6G6 1762 aa16.77■□□□□ 0.28
RPUSD2-201ENST00000315616 USP17L5A8MUK1 530 aa16.77■□□□□ 0.27
RPUSD2-201ENST00000315616 CDC25AP30304 524 aa16.77■□□□□ 0.27
RPUSD2-201ENST00000315616 PTPN21Q16825 1174 aa16.77■□□□□ 0.27
RPUSD2-201ENST00000315616 ENOX1Q8TC92 643 aaKnown RBP16.77■□□□□ 0.27
RPUSD2-201ENST00000315616 MASTLQ96GX5 879 aa16.77■□□□□ 0.27
RPUSD2-201ENST00000315616 NFE2L3Q9Y4A8 694 aa16.77■□□□□ 0.27
RPUSD2-201ENST00000315616 QSER1Q2KHR3 1735 aa16.76■□□□□ 0.27
RPUSD2-201ENST00000315616 ZNF18P17022 549 aa16.76■□□□□ 0.27
RPUSD2-201ENST00000315616 ARL6IP4Q66PJ3 421 aaKnown RBP16.76■□□□□ 0.27
RPUSD2-201ENST00000315616 CCDC125Q86Z20 511 aa16.76■□□□□ 0.27
RPUSD2-201ENST00000315616 MTRQ99707 1265 aa16.76■□□□□ 0.27
RPUSD2-201ENST00000315616 USP40Q9NVE5 1235 aa16.76■□□□□ 0.27
RPUSD2-201ENST00000315616 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
RPUSD2-201ENST00000315616 CGNQ9P2M7 1197 aaKnown RBP16.76■□□□□ 0.27
RPUSD2-201ENST00000315616 CCDC194A0A1B0GVG4 234 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 TMEM232C9JQI7 657 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 INF2Q27J81 1249 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 GALNT17Q6IS24 598 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 CCDC148Q8NFR7 591 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 ZMYND12Q9H0C1 365 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 TMEM60Q9H2L4 133 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 VAT1LQ9HCJ6 419 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 MTMR4Q9NYA4 1195 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 MYO1BO43795 1136 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 AKR1B1P15121 316 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 CFAP100Q494V2 611 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 APOBEC3HQ6NTF7 200 aaKnown RBP16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 CDC42EP5Q6NZY7 148 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 PDXDC2PQ6P474 469 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 HOMER1Q86YM7 354 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 CLEC10AQ8IUN9 316 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 UBA5Q9GZZ9 404 aa16.75■□□□□ 0.27
RPUSD2-201ENST00000315616 TPD52L1Q16890 204 aaPredicted RBP16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 IQUBQ8NA54 791 aa16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 PIGSQ96S52 555 aa16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 SAMSN1Q9NSI8 373 aaKnown RBP16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 DACH1Q9UI36 760 aa16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 IGKV6D-41A0A0C4DH26 115 aa16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 SLURP2P0DP57 97 aa16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 PDHBP11177 359 aa16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 FLAD1Q8NFF5 587 aa16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 GSDMAQ96QA5 445 aa16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 BLZF1Q9H2G9 400 aa16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 DBNDD1Q9H9R9 158 aa16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 PLIN4Q96Q06 1357 aa16.74■□□□□ 0.27
RPUSD2-201ENST00000315616 CBFA2T2O43439 604 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 SMARCA1P28370 1054 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 ERCC5P28715 1186 aaPredicted RBP16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 LONP1P36776 959 aaKnown RBP16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 NAPAP54920 295 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 EIF6P56537 245 aaKnown RBP16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 NCBP1Q09161 790 aaKnown RBP16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 SF3B2Q13435 895 aaKnown RBP16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 VSTM4Q8IW00 320 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 SMYD4Q8IYR2 804 aaPredicted RBP16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 CCDC150Q8NCX0 1101 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 RRP36Q96EU6 259 aaKnown RBP16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 CCDC34Q96HJ3 373 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 CAMKK2Q96RR4 588 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 MYH8P13535 1937 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 SMCO2A6NFE2 343 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 TNNT1P13805 278 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 NFIAQ12857 509 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 CUL4BQ13620 913 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 LRRC47Q8N1G4 583 aaKnown RBP16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 RIOX1Q9H6W3 641 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 TRMT1Q9NXH9 659 aaKnown RBP16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 SERPINB13Q9UIV8 391 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 PCDHAC2Q9Y5I4 1007 aa16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 FRMPD2Q68DX3 1309 aaPredicted RBP16.73■□□□□ 0.27
RPUSD2-201ENST00000315616 CCDC66A2RUB6 948 aa16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 PPP1R3GB7ZBB8 358 aa16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 G3V3G9 751 aa16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 SFPQP23246 707 aaKnown RBP eCLIP16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 DCAF8Q5TAQ9 597 aa16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 ZFPM1Q8IX07 1006 aa16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 CCAR2Q8N163 923 aaKnown RBP16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 PP2D1A8MPX8 630 aa16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 SHMT1P34896 483 aa16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 BAG6P46379 1132 aa16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 C2CD5Q86YS7 1000 aa16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 TEKT1Q969V4 418 aa16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 KCND1Q9NSA2 647 aa16.72■□□□□ 0.27
RPUSD2-201ENST00000315616 CDK11BP21127 795 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms