RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 USP49Q70CQ1 688 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 BLIDQ8IZY5 108 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 SUPT20HQ8NEM7 779 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 AKR1B15C9JRZ8 316 aaPredicted RBP16.88■□□□□ 0.29
CHFR-202ENST00000315585 LAD1O00515 517 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 FKBP1AP62942 108 aaKnown RBP16.88■□□□□ 0.29
CHFR-202ENST00000315585 TFAP4Q01664 338 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 NPY5RQ15761 445 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 CCDC93Q567U6 631 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 MAPKAPK5Q8IW41 473 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 CCDC51Q96ER9 411 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 DNAI1Q9UI46 699 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 PCDHA4Q9UN74 947 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 PPP2R2CQ9Y2T4 447 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.88■□□□□ 0.294e-7■■■■□ 20.4
CHFR-202ENST00000315585 EP400Q96L91 3159 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 TMEM232C9JQI7 657 aa16.87■□□□□ 0.29
CHFR-202ENST00000315585 SMIM22K7EJ46 135 aa16.87■□□□□ 0.29
CHFR-202ENST00000315585 GTPBP6O43824 516 aaPredicted RBP16.87■□□□□ 0.29
CHFR-202ENST00000315585 GRAMD1CQ8IYS0 662 aa16.87■□□□□ 0.29
CHFR-202ENST00000315585 CCDC12Q8WUD4 166 aaPredicted RBP16.87■□□□□ 0.29
CHFR-202ENST00000315585 ARID3AQ99856 593 aa16.87■□□□□ 0.29
CHFR-202ENST00000315585 GTPBP4Q9BZE4 634 aaKnown RBP16.87■□□□□ 0.29
CHFR-202ENST00000315585 INTS13Q9NVM9 706 aa16.87■□□□□ 0.29
CHFR-202ENST00000315585 TSPY3P0CV98 308 aa16.87■□□□□ 0.29
CHFR-202ENST00000315585 TSPY8P0CW00 308 aa16.87■□□□□ 0.29
CHFR-202ENST00000315585 EARS2Q5JPH6 523 aaKnown RBP16.87■□□□□ 0.29
CHFR-202ENST00000315585 PNMA1Q8ND90 353 aa16.87■□□□□ 0.29
CHFR-202ENST00000315585 SHISA4Q96DD7 197 aa16.87■□□□□ 0.29
CHFR-202ENST00000315585 DAGLAQ9Y4D2 1042 aa16.87■□□□□ 0.29
CHFR-202ENST00000315585 FLT1P17948 1338 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 CCDC194A0A1B0GVG4 234 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 hCG_1642624A0A1W2PR95 340 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 PRKCSHP14314 528 aaPredicted RBP16.86■□□□□ 0.29
CHFR-202ENST00000315585 RHBDL3P58872 404 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 CUL4BQ13620 913 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 DOK7Q18PE1 504 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 HHIPL2Q6UWX4 724 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 TC2NQ8N9U0 490 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 MNS1Q8NEH6 495 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 SLC16A10Q8TF71 515 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 SAMSN1Q9NSI8 373 aaKnown RBP16.86■□□□□ 0.29
CHFR-202ENST00000315585 ARGLU1Q9NWB6 273 aaPredicted RBP16.86■□□□□ 0.29
CHFR-202ENST00000315585 TTF2Q9UNY4 1162 aaKnown RBP16.86■□□□□ 0.29
CHFR-202ENST00000315585 FAM205CA6NFA0 338 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 GRM4Q14833 912 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 CNGA4Q8IV77 575 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 REXO1L1PQ8IX06 675 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 TRMT44Q8IYL2 757 aaKnown RBP16.86■□□□□ 0.29
CHFR-202ENST00000315585 RWDD2AQ9UIY3 292 aa16.86■□□□□ 0.29
CHFR-202ENST00000315585 ITIH6Q6UXX5 1313 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 MCM7P33993 719 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 TRIM14Q14142 442 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 CDKAL1Q5VV42 579 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 RCSD1Q6JBY9 416 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 C16orf86Q6ZW13 317 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 TMEM139Q8IV31 216 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 DAGLBQ8NCG7 672 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 TEKT1Q969V4 418 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 MRIQ9BWK5 157 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 NMT2O60551 498 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 CCDC175P0C221 793 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 CASQ1P31415 396 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 CBX1P83916 185 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 KLHL10Q6JEL2 608 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 DTHD1Q6ZMT9 781 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 UBXN4Q92575 508 aa16.85■□□□□ 0.29
CHFR-202ENST00000315585 DDX41Q9UJV9 622 aaKnown RBP16.85■□□□□ 0.29
CHFR-202ENST00000315585 A0A087X0B3 334 aa16.84■□□□□ 0.29
CHFR-202ENST00000315585 E2F4Q16254 413 aa16.84■□□□□ 0.29
CHFR-202ENST00000315585 ZNF658Q5TYW1 1059 aaPredicted RBP16.84■□□□□ 0.29
CHFR-202ENST00000315585 STRIP1Q5VSL9 837 aa16.84■□□□□ 0.29
CHFR-202ENST00000315585 TRIM65Q6PJ69 517 aa16.84■□□□□ 0.29
CHFR-202ENST00000315585 DYNLL2Q96FJ2 89 aa16.84■□□□□ 0.29
CHFR-202ENST00000315585 MAGEF1Q9HAY2 307 aa16.84■□□□□ 0.29
CHFR-202ENST00000315585 ADD3Q9UEY8 706 aaKnown RBP16.84■□□□□ 0.29
CHFR-202ENST00000315585 SAP30BPQ9UHR5 308 aaKnown RBP16.84■□□□□ 0.29
CHFR-202ENST00000315585 LRRC10BA6NIK2 292 aa16.84■□□□□ 0.29
CHFR-202ENST00000315585 PPP1R3GB7ZBB8 358 aa16.84■□□□□ 0.29
CHFR-202ENST00000315585 IGSF22Q8N9C0 903 aa16.84■□□□□ 0.29
CHFR-202ENST00000315585 EFCAB8A8MWE9 144 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 SMARCA1P28370 1054 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 CHRNA5P30532 468 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 TUBB4BP68371 445 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 HDLBPQ00341 1268 aaKnown RBP16.83■□□□□ 0.28
CHFR-202ENST00000315585 PAK1Q13153 545 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 STIM1Q13586 685 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 TUBB2AQ13885 445 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 ELF2Q15723 593 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 HSP90AA4PQ58FG1 418 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 CCDC47Q96A33 483 aaKnown RBP16.83■□□□□ 0.28
CHFR-202ENST00000315585 TUBB2BQ9BVA1 445 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 CUEDC2Q9H467 287 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 CDK5RAP2Q96SN8 1893 aa16.83■□□□□ 0.28
CHFR-202ENST00000315585 F8W031 263 aaPredicted RBP16.82■□□□□ 0.28
CHFR-202ENST00000315585 URI1O94763 535 aaPredicted RBP16.82■□□□□ 0.28
CHFR-202ENST00000315585 PRPHP41219 470 aa16.82■□□□□ 0.28
CHFR-202ENST00000315585 STAT6P42226 847 aa16.82■□□□□ 0.28
CHFR-202ENST00000315585 CDK8P49336 464 aa16.82■□□□□ 0.28
CHFR-202ENST00000315585 ADKP55263 362 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms