RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 ENAHQ8N8S7 591 aaPredicted RBP9.24□□□□□ -0.93
CDC42-201ENST00000315554 ZNF296Q8WUU4 475 aaPredicted RBP9.24□□□□□ -0.93
CDC42-201ENST00000315554 MKL1Q969V6 931 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 PAGR1Q9BTK6 254 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 TCP11L1Q9NUJ3 509 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 PNMA3Q9UL41 463 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 SNX14Q9Y5W7 946 aa9.24□□□□□ -0.93
CDC42-201ENST00000315554 PCNTO95613 3336 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 FRMPD2Q68DX3 1309 aaPredicted RBP9.23□□□□□ -0.93
CDC42-201ENST00000315554 IFIT3O14879 490 aaKnown RBP9.23□□□□□ -0.93
CDC42-201ENST00000315554 WDR46O15213 610 aaKnown RBP9.23□□□□□ -0.93
CDC42-201ENST00000315554 PRC1O43663 620 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 FLOT1O75955 427 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 TOP1P11387 765 aaKnown RBP9.23□□□□□ -0.93
CDC42-201ENST00000315554 ZKSCAN1P17029 563 aaPredicted RBP9.23□□□□□ -0.93
CDC42-201ENST00000315554 HOXA7P31268 230 aaPredicted RBP9.23□□□□□ -0.93
CDC42-201ENST00000315554 HERVK_113P62684 666 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 CAP1Q01518 475 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 CCDC96Q2M329 555 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 KCTD1Q719H9 257 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 RAB11FIP4Q86YS3 637 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 CD99L2Q8TCZ2 262 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 LPAR1Q92633 364 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 ATG4CQ96DT6 458 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 JAKMIP1Q96N16 626 aaKnown RBP9.23□□□□□ -0.93
CDC42-201ENST00000315554 ARHGAP39Q9C0H5 1083 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 KAT14Q9H8E8 782 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 TXNRD2Q9NNW7 524 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 ZCCHC17Q9NP64 241 aaKnown RBP9.23□□□□□ -0.93
CDC42-201ENST00000315554 SLC45A1Q9Y2W3 748 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 MYH4Q9Y623 1939 aa9.23□□□□□ -0.93
CDC42-201ENST00000315554 SPDYE16A6NNV3 312 aaPredicted RBP9.22□□□□□ -0.93
CDC42-201ENST00000315554 TMEM232C9JQI7 657 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 FKTNO75072 461 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 GOLGA8HP0CJ92 632 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 BCRP11274 1271 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 SLC1A4P43007 532 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 NOVP48745 357 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 SNAP25P60880 206 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 IKQ13123 557 aaPredicted RBP9.22□□□□□ -0.93
CDC42-201ENST00000315554 WTAPQ15007 396 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 SEC23AQ15436 765 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 TMEM67Q5HYA8 995 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 PPP4R3BQ5MIZ7 849 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 IFIT1BQ5T764 474 aaKnown RBP9.22□□□□□ -0.93
CDC42-201ENST00000315554 IFFO2Q5TF58 517 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 TTBK2Q6IQ55 1244 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 C17orf99Q6UX52 265 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 PNMA1Q8ND90 353 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 GMCL1P1Q8NEA9 526 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 NEK1Q96PY6 1258 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 CFHR5Q9BXR6 569 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 GPCPD1Q9NPB8 672 aa9.22□□□□□ -0.93
CDC42-201ENST00000315554 ERICH2A1L162 156 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 TK2O00142 265 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 CNMDO75829 334 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 BMP3P12645 472 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 CTGFP29279 349 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 MCM5P33992 734 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 SLC16A2P36021 539 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 SLC4A3P48751 1232 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 SP3Q02447 781 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 COG2Q14746 738 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 Q3C1V9 767 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 DGKHQ86XP1 1220 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 KCNB2Q92953 911 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 KIFC2Q96AC6 838 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 TTC14Q96N46 770 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 SLF1Q9BQI6 1058 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 MYL10Q9BUA6 226 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 CPVLQ9H3G5 476 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 BTBD7Q9P203 1132 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 RBPJLQ9UBG7 517 aa9.21□□□□□ -0.93
CDC42-201ENST00000315554 ZSWIM8A7E2V4 1837 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 SH2B2O14492 632 aaPredicted RBP9.21□□□□□ -0.94
CDC42-201ENST00000315554 PDHBP11177 359 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 TAL1P17542 331 aaPredicted RBP9.21□□□□□ -0.94
CDC42-201ENST00000315554 CASTP20810 708 aaKnown RBP9.21□□□□□ -0.94
CDC42-201ENST00000315554 KRT32Q14532 448 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 PLS1Q14651 629 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 SART3Q15020 963 aaKnown RBP9.21□□□□□ -0.94
CDC42-201ENST00000315554 TSGA10IPQ3SY00 556 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 CCDC178Q5BJE1 867 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 NFXL1Q6ZNB6 911 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 IGDCC4Q8TDY8 1250 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 DCAF4Q8WV16 495 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 ANKS1AQ92625 1134 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 GMCL1Q96IK5 515 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 LY9Q9HBG7 655 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 PPP1R9AQ9ULJ8 1098 aa9.21□□□□□ -0.94
CDC42-201ENST00000315554 CASP8AP2Q9UKL3 1982 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 RXRAP19793 462 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 PSMC4P43686 418 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 GCLCP48506 637 aaPredicted RBP9.2□□□□□ -0.94
CDC42-201ENST00000315554 ERVK-9P63128 1117 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 ERVK-24P63145 666 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 LACTBP83111 547 aaPredicted RBP9.2□□□□□ -0.94
CDC42-201ENST00000315554 EXOSC10Q01780 885 aaKnown RBP9.2□□□□□ -0.94
CDC42-201ENST00000315554 COL13A1Q5TAT6 717 aaPredicted RBP9.2□□□□□ -0.94
CDC42-201ENST00000315554 WDR78Q5VTH9 848 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms