RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 BBOX1O75936 387 aa8.99□□□□□ -0.97
CNOT4-201ENST00000315544 SMARCA1P28370 1054 aa8.99□□□□□ -0.97
CNOT4-201ENST00000315544 FSTL1Q12841 308 aa8.99□□□□□ -0.97
CNOT4-201ENST00000315544 TTF1Q15361 905 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-201ENST00000315544 LRRC55Q6ZSA7 311 aa8.99□□□□□ -0.97
CNOT4-201ENST00000315544 GRAMD1CQ8IYS0 662 aa8.99□□□□□ -0.97
CNOT4-201ENST00000315544 GIMAP8Q8ND71 665 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-201ENST00000315544 DNAJC2Q99543 621 aaKnown RBP8.99□□□□□ -0.97
CNOT4-201ENST00000315544 BLOC1S4Q9NUP1 217 aa8.99□□□□□ -0.97
CNOT4-201ENST00000315544 BAZ2BQ9UIF8 2168 aaKnown RBP8.98□□□□□ -0.97
CNOT4-201ENST00000315544 YDJCA8MPS7 323 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 EFCAB8A8MWE9 144 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 STXBP3O00186 592 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 OPLAHO14841 1288 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 RHOBTB3O94955 611 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 TNNT1P13805 278 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 BCAMP50895 628 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 CHRNDQ07001 517 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 PPP2R5BQ15173 497 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 CCDC150Q8NCX0 1101 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 ZNF397Q8NF99 534 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-201ENST00000315544 EPSTI1Q96J88 318 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 FIZ1Q96SL8 496 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 DCP1AQ9NPI6 582 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-201ENST00000315544 UNCXA6NJT0 531 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 MYL5Q02045 173 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 TNFAIP8L3Q5GJ75 292 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 IRX2Q9BZI1 471 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-201ENST00000315544 DNAI1Q9UI46 699 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 KCNH3Q9ULD8 1083 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 USP20Q9Y2K6 914 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 PPARAQ07869 468 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 POSTNQ15063 836 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 CNKSR1Q969H4 720 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 TRIM44Q96DX7 344 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-201ENST00000315544 PCDHA3Q9Y5H8 950 aa8.98□□□□□ -0.97
CNOT4-201ENST00000315544 VIL1P09327 827 aaKnown RBP8.97□□□□□ -0.97
CNOT4-201ENST00000315544 PRPHP41219 470 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 ELF2Q15723 593 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 TMEM119Q4V9L6 283 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 CCDC158Q5M9N0 1113 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 ZNF784Q8NCA9 323 aaPredicted RBP8.97□□□□□ -0.97
CNOT4-201ENST00000315544 KIAA0895Q8NCT3 520 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 UTP14AQ9BVJ6 771 aaKnown RBP8.97□□□□□ -0.97
CNOT4-201ENST00000315544 PATJQ8NI35 1801 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 A0A1W2PQC6 194 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 PJA2O43164 708 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 DDAH1O94760 285 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 POU5F1Q01860 360 aaKnown RBP8.97□□□□□ -0.97
CNOT4-201ENST00000315544 EPM2AIP1Q7L775 607 aaPredicted RBP8.97□□□□□ -0.97
CNOT4-201ENST00000315544 RTKN2Q8IZC4 609 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 SPC24Q8NBT2 197 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 C16orf45Q96MC5 204 aaPredicted RBP8.97□□□□□ -0.97
CNOT4-201ENST00000315544 PCDHA6Q9UN73 950 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 PCDHA8Q9Y5H6 950 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 A0A1W2PQJ5 194 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 ZBTB7CA1YPR0 619 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 PDE2AO00408 941 aaPredicted RBP8.97□□□□□ -0.97
CNOT4-201ENST00000315544 EPHB6O15197 1021 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 PPP1R37O75864 691 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 ARL6IP4Q66PJ3 421 aaKnown RBP8.97□□□□□ -0.97
CNOT4-201ENST00000315544 KCNN1Q92952 543 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 LENG9Q96B70 501 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 GSDMAQ96QA5 445 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 MYL10Q9BUA6 226 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 CCSER1Q9C0I3 900 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 GPR88Q9GZN0 384 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 ZMYND12Q9H0C1 365 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 ABCB11O95342 1321 aa8.97□□□□□ -0.97
CNOT4-201ENST00000315544 LMNB1P20700 586 aa8.96□□□□□ -0.97
CNOT4-201ENST00000315544 SCNN1DP51172 638 aa8.96□□□□□ -0.97
CNOT4-201ENST00000315544 IMMTQ16891 758 aaKnown RBP8.96□□□□□ -0.97
CNOT4-201ENST00000315544 C12orf60Q5U649 245 aa8.96□□□□□ -0.97
CNOT4-201ENST00000315544 CREBRFQ8IUR6 639 aa8.96□□□□□ -0.97
CNOT4-201ENST00000315544 ZNF654Q8IZM8 581 aa8.96□□□□□ -0.97
CNOT4-201ENST00000315544 TMEM60Q9H2L4 133 aa8.96□□□□□ -0.97
CNOT4-201ENST00000315544 RIOX1Q9H6W3 641 aa8.96□□□□□ -0.97
CNOT4-201ENST00000315544 GREB1Q4ZG55 1949 aa8.96□□□□□ -0.97
CNOT4-201ENST00000315544 ZNF541Q9H0D2 1346 aa8.96□□□□□ -0.97
CNOT4-201ENST00000315544 GOLGA8BA8MQT2 603 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 ITGBL1O95965 494 aaPredicted RBP8.96□□□□□ -0.98
CNOT4-201ENST00000315544 HAND2P61296 217 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 UBE4AQ14139 1066 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 GRM4Q14833 912 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 ERCC6LQ2NKX8 1250 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 TTLL6Q8N841 843 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 MLKLQ8NB16 471 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 ZNF396Q96N95 335 aaPredicted RBP8.96□□□□□ -0.98
CNOT4-201ENST00000315544 PNMA5Q96PV4 448 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 SERTAD1Q9UHV2 236 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 RWDD2AQ9UIY3 292 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 GLTPD2A6NH11 291 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 TLR2O60603 784 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 NPM3O75607 178 aaKnown RBP8.96□□□□□ -0.98
CNOT4-201ENST00000315544 CLSTN1O94985 981 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 UQCRFS1P1P0C7P4 283 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 MYBL2P10244 700 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 ALDH1B1P30837 517 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 GHRHRQ02643 423 aa8.96□□□□□ -0.98
CNOT4-201ENST00000315544 DALRD3Q5D0E6 543 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms