RNA–Protein interactions for RNA: ENST00000315274.6

MMP1-201, Transcript of matrix metallopeptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP1, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1-201ENST00000315274 USP17L22D6RA61 530 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 USP17L17D6RBQ6 530 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 USP17L19D6RCP7 530 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 USP17L20D6RJB6 530 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 JAK2O60674 1132 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 CDKL5O76039 1030 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 IFNAR1P17181 557 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 AKAP17AQ02040 695 aaKnown RBP11.06□□□□□ -0.64
MMP1-201ENST00000315274 SSRP1Q08945 709 aaKnown RBP11.06□□□□□ -0.64
MMP1-201ENST00000315274 USP17L24Q0WX57 530 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 CUL4AQ13619 759 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 CATSPERGQ6ZRH7 1159 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 NSUN7Q8NE18 718 aaKnown RBP11.06□□□□□ -0.64
MMP1-201ENST00000315274 NID2Q14112 1375 aa11.06□□□□□ -0.64
MMP1-201ENST00000315274 PTPDC1A2A3K4 754 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 FAM155AB1AL88 458 aaPredicted RBP11.05□□□□□ -0.64
MMP1-201ENST00000315274 CYTH3O43739 400 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 SNAP25P60880 206 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 MOGSQ13724 837 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 COG2Q14746 738 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 SYDE2Q5VT97 1194 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 TRIM22Q8IYM9 498 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 PRPF38AQ8NAV1 312 aaKnown RBP11.05□□□□□ -0.64
MMP1-201ENST00000315274 BRI3BPQ8WY22 251 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 SLF1Q9BQI6 1058 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 LLPHQ9BRT6 129 aaKnown RBP11.05□□□□□ -0.64
MMP1-201ENST00000315274 PRR12Q9ULL5 1215 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 AGTPBP1Q9UPW5 1226 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 SMC3Q9UQE7 1217 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 RASSF10A6NK89 507 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 BTBD19C9JJ37 291 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 IRX3P78415 501 aaPredicted RBP11.05□□□□□ -0.64
MMP1-201ENST00000315274 FUT2Q10981 343 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 SLC35G1Q2M3R5 365 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 GPAT2Q6NUI2 795 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 BTNL9Q6UXG8 535 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 FAM160B2Q86V87 743 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 RRP36Q96EU6 259 aaKnown RBP11.05□□□□□ -0.64
MMP1-201ENST00000315274 INTS4Q96HW7 963 aaKnown RBP11.05□□□□□ -0.64
MMP1-201ENST00000315274 CAPNS2Q96L46 248 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 IPO9Q96P70 1041 aaKnown RBP11.05□□□□□ -0.64
MMP1-201ENST00000315274 PIGSQ96S52 555 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 ZIC5Q96T25 663 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 SPZ1Q9BXG8 430 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 RIOX1Q9H6W3 641 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 JMJD4Q9H9V9 463 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 HOXC10Q9NYD6 342 aa11.05□□□□□ -0.64
MMP1-201ENST00000315274 ORC3Q9UBD5 711 aaPredicted RBP11.05□□□□□ -0.64
MMP1-201ENST00000315274 MANSC4A6NHS7 340 aaPredicted RBP11.04□□□□□ -0.64
MMP1-201ENST00000315274 PDHXO00330 501 aa11.04□□□□□ -0.64
MMP1-201ENST00000315274 FMNL1O95466 1100 aaPredicted RBP11.04□□□□□ -0.64
MMP1-201ENST00000315274 SMARCA1P28370 1054 aa11.04□□□□□ -0.64
MMP1-201ENST00000315274 GJB2P29033 226 aa11.04□□□□□ -0.64
MMP1-201ENST00000315274 HOXA7P31268 230 aaPredicted RBP11.04□□□□□ -0.64
MMP1-201ENST00000315274 KIF23Q02241 960 aaPredicted RBP11.04□□□□□ -0.64
MMP1-201ENST00000315274 PABPC4Q13310 644 aaKnown RBP eCLIP11.04□□□□□ -0.64
MMP1-201ENST00000315274 FAM184AQ8NB25 1140 aa11.04□□□□□ -0.64
MMP1-201ENST00000315274 PTPN18Q99952 460 aa11.04□□□□□ -0.64
MMP1-201ENST00000315274 ASCC2Q9H1I8 757 aaPredicted RBP11.04□□□□□ -0.64
MMP1-201ENST00000315274 SEC63Q9UGP8 760 aaKnown RBP11.04□□□□□ -0.64
MMP1-201ENST00000315274 CTDP1Q9Y5B0 961 aaPredicted RBP11.04□□□□□ -0.64
MMP1-201ENST00000315274 CNTNAP5Q8WYK1 1306 aa11.04□□□□□ -0.64
MMP1-201ENST00000315274 LOC285556D6RIA3 1793 aa11.04□□□□□ -0.64
MMP1-201ENST00000315274 PRPF3O43395 683 aaKnown RBP11.03□□□□□ -0.64
MMP1-201ENST00000315274 PLA2G6O60733 806 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 AOC2O75106 756 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 FDPSP14324 419 aaKnown RBP11.03□□□□□ -0.64
MMP1-201ENST00000315274 OSBPP22059 807 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 CCDC174Q6PII3 467 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 FAM43AQ8N2R8 423 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 SMARCC2Q8TAQ2 1214 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 ATG4CQ96DT6 458 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 P2RX7Q99572 595 aaKnown RBP11.03□□□□□ -0.64
MMP1-201ENST00000315274 RNF26Q9BY78 433 aaPredicted RBP11.03□□□□□ -0.64
MMP1-201ENST00000315274 PPP1R9AQ9ULJ8 1098 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 SMCHD1A6NHR9 2005 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 CYP2C8P10632 490 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 DSG3P32926 999 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 FOSBP53539 338 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 INHBEP58166 350 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 C1QTNF8P60827 252 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 HMGN5P82970 282 aaKnown RBP11.03□□□□□ -0.64
MMP1-201ENST00000315274 NOGQ13253 232 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 CDC37Q16543 378 aaPredicted RBP11.03□□□□□ -0.64
MMP1-201ENST00000315274 ANKRD23Q86SG2 305 aa11.03□□□□□ -0.64
MMP1-201ENST00000315274 PNMA6FA0A0J9YX94 578 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 TESPA1A2RU30 521 aaPredicted RBP11.02□□□□□ -0.65
MMP1-201ENST00000315274 VWA5AO00534 786 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 ZBTB5O15062 677 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 ZBED4O75132 1171 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 DEXIO95424 95 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 SREBF2Q12772 1141 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 QRICH1Q2TAL8 776 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 HEATR3Q7Z4Q2 680 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 CPXCR1Q8N123 301 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 AIFM3Q96NN9 605 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 PNMA3Q9UL41 463 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 RLFQ13129 1914 aa11.02□□□□□ -0.65
MMP1-201ENST00000315274 PARP14Q460N5 1801 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms