RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 DLATP10515 647 aaKnown RBP14.98□□□□□ -0.01
RFFL-201ENST00000315249 MARK3P27448 753 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 ME3Q16798 604 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 USP17L2Q6R6M4 530 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 PPP1R21Q6ZMI0 780 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 ZBTB9Q96C00 473 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 ZMYM6O95789 1325 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 UBN2Q6ZU65 1347 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 CLTCL1P53675 1640 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 ERICH4A6NGS2 130 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 POSTNQ15063 836 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 SEL1L2Q5TEA6 688 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 FAM178BQ8IXR5 827 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 KIF24Q5T7B8 1368 aa14.98□□□□□ -0.01
RFFL-201ENST00000315249 HSF2BPO75031 334 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 CCND2P30279 289 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 CCDC125Q86Z20 511 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 SMIM23A6NLE4 172 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 DDAH1O94760 285 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 ADRA2BP18089 450 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 CRB1P82279 1406 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 BCRP11274 1271 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 ADD2P35612 726 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 NSMCE1Q8WV22 266 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 SPATA31A6Q5VVP1 1343 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 ODF2LQ9ULJ1 636 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 TNNC2P02585 160 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 HSPA4P34932 840 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 SYDE2Q5VT97 1194 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 NELFBQ8WX92 580 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 FAM204AQ9H8W3 233 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 SERPINA10Q9UK55 444 aa14.97□□□□□ -0.01
RFFL-201ENST00000315249 GH2P01242 217 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 PCP11498 1178 aaKnown RBP14.96□□□□□ -0.01
RFFL-201ENST00000315249 RNASE9P60153 205 aaKnown RBP14.96□□□□□ -0.01
RFFL-201ENST00000315249 MTUS1Q9ULD2 1270 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 GLI2P10070 1586 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 VWA3BQ502W6 1294 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 ZNF569Q5MCW4 686 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 IWS1Q96ST2 819 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 PARP2Q9UGN5 583 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 CDC42BPBQ9Y5S2 1711 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 RIMS1Q86UR5 1692 aaKnown RBP14.96□□□□□ -0.01
RFFL-201ENST00000315249 CAPN9O14815 690 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 KIAA1841Q6NSI8 718 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 CEP112Q8N8E3 955 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 PANK4Q9NVE7 773 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 MINPP1Q9UNW1 487 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 CCDC66A2RUB6 948 aa14.96□□□□□ -0.01
RFFL-201ENST00000315249 INO80B-WBP1J3KQ70 363 aa14.96□□□□□ -0.02
RFFL-201ENST00000315249 SH3BP5O60239 455 aa14.96□□□□□ -0.02
RFFL-201ENST00000315249 RETREG2Q8NC44 543 aa14.96□□□□□ -0.02
RFFL-201ENST00000315249 POMGNT1Q8WZA1 660 aa14.96□□□□□ -0.02
RFFL-201ENST00000315249 PGBD1Q96JS3 809 aa14.96□□□□□ -0.02
RFFL-201ENST00000315249 INO80BQ9C086 356 aaPredicted RBP14.96□□□□□ -0.02
RFFL-201ENST00000315249 NUB1Q9Y5A7 615 aa14.96□□□□□ -0.02
RFFL-201ENST00000315249 AKR1B15C9JRZ8 316 aaPredicted RBP14.95□□□□□ -0.02
RFFL-201ENST00000315249 IGSF22Q8N9C0 903 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 FAM107BQ9H098 131 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 OR52Z1P0C646 297 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 ZSCAN20P17040 1043 aaPredicted RBP14.95□□□□□ -0.02
RFFL-201ENST00000315249 MIS18BP1Q6P0N0 1132 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 SH3RF3Q8TEJ3 882 aaPredicted RBP14.95□□□□□ -0.02
RFFL-201ENST00000315249 GTF3C6Q969F1 213 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 COA7Q96BR5 231 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 ZNF274Q96GC6 653 aaPredicted RBP14.95□□□□□ -0.02
RFFL-201ENST00000315249 QRICH2Q9H0J4 1663 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 NLRP7Q8WX94 980 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 ZBED2Q9BTP6 218 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 MYO1AQ9UBC5 1043 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 CTAGE15A4D2H0 777 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 ASNSP08243 561 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 CTAGE8P0CG41 777 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 IRX5P78411 483 aaPredicted RBP14.95□□□□□ -0.02
RFFL-201ENST00000315249 CTAGE6Q86UF2 777 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 CTAGE4Q8IX94 777 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 UAP1Q16222 522 aaPredicted RBP14.95□□□□□ -0.02
RFFL-201ENST00000315249 MYL3P08590 195 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 VPS72Q15906 364 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 CCDC122Q5T0U0 273 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 CNGA4Q8IV77 575 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 RAB3IL1Q8TBN0 382 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 RASGRP4Q8TDF6 673 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 OTUD5Q96G74 571 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 CCDC77Q9BR77 488 aa14.95□□□□□ -0.02
RFFL-201ENST00000315249 CYP19A1P11511 503 aaPredicted RBP14.94□□□□□ -0.02
RFFL-201ENST00000315249 RASGRF1Q13972 1273 aa14.94□□□□□ -0.02
RFFL-201ENST00000315249 CCDC127Q96BQ5 260 aa14.94□□□□□ -0.02
RFFL-201ENST00000315249 IFT81Q8WYA0 676 aa14.94□□□□□ -0.02
RFFL-201ENST00000315249 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.94□□□□□ -0.02
RFFL-201ENST00000315249 MICAL1Q8TDZ2 1067 aa14.94□□□□□ -0.02
RFFL-201ENST00000315249 CELF1Q92879 486 aaKnown RBP14.94□□□□□ -0.02
RFFL-201ENST00000315249 PPANQ9NQ55 473 aaKnown RBP14.94□□□□□ -0.02
RFFL-201ENST00000315249 FAM196BA6NMK8 535 aa14.94□□□□□ -0.02
RFFL-201ENST00000315249 ATF7P17544 494 aaPredicted RBP14.94□□□□□ -0.02
RFFL-201ENST00000315249 CDK8P49336 464 aa14.94□□□□□ -0.02
RFFL-201ENST00000315249 RNF187Q5TA31 235 aaPredicted RBP14.94□□□□□ -0.02
RFFL-201ENST00000315249 APOBEC3FQ8IUX4 373 aaKnown RBP14.94□□□□□ -0.02
RFFL-201ENST00000315249 NOSTRINQ8IVI9 506 aa14.94□□□□□ -0.02
RFFL-201ENST00000315249 TSGA10Q9BZW7 698 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms