RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CHMLP26374 656 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 CYP2C19P33261 490 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 MFAP1P55081 439 aaKnown RBP17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 TMEM47Q9BQJ4 181 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 TEX13BQ9BXU2 312 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 FEM1BQ9UK73 627 aa17.28■□□□□ 0.36
PPP1CA-201ENST00000312989 LAMA4Q16363 1823 aa17.27■□□□□ 0.36
PPP1CA-201ENST00000312989 PLA2G6O60733 806 aa17.27■□□□□ 0.35
PPP1CA-201ENST00000312989 MCCP23508 829 aa17.27■□□□□ 0.35
PPP1CA-201ENST00000312989 ZNF792Q3KQV3 632 aa17.27■□□□□ 0.35
PPP1CA-201ENST00000312989 MAML3Q96JK9 1138 aa17.27■□□□□ 0.35
PPP1CA-201ENST00000312989 RAD50Q92878 1312 aa17.27■□□□□ 0.35
PPP1CA-201ENST00000312989 MYH4Q9Y623 1939 aa17.26■□□□□ 0.35
PPP1CA-201ENST00000312989 DNAJC25-GNG10A0A024R161 153 aa17.26■□□□□ 0.35
PPP1CA-201ENST00000312989 TMEM232C9JQI7 657 aa17.26■□□□□ 0.35
PPP1CA-201ENST00000312989 PGK2P07205 417 aa17.26■□□□□ 0.35
PPP1CA-201ENST00000312989 CAPN2P17655 700 aa17.26■□□□□ 0.35
PPP1CA-201ENST00000312989 RRP12Q5JTH9 1297 aaKnown RBP17.26■□□□□ 0.35
PPP1CA-201ENST00000312989 SNRNP48Q6IEG0 339 aaKnown RBP17.26■□□□□ 0.35
PPP1CA-201ENST00000312989 KIFC2Q96AC6 838 aa17.26■□□□□ 0.35
PPP1CA-201ENST00000312989 FGD4Q96M96 766 aa17.26■□□□□ 0.35
PPP1CA-201ENST00000312989 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
PPP1CA-201ENST00000312989 RANBP2P49792 3224 aaKnown RBP17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 ZNF213O14771 459 aa17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 TFRCP02786 760 aaKnown RBP17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 SNHG28P0DPA3 235 aa17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 FCER1AP12319 257 aa17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 SLC1A4P43007 532 aa17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 OAZ1P54368 228 aa17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 PTH1RQ03431 593 aa17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 MFSD6Q6ZSS7 791 aa17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 KCTD1Q719H9 257 aa17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 ANKLE1Q8NAG6 615 aa17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 PAWRQ96IZ0 340 aaKnown RBP17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 RAVER2Q9HCJ3 691 aaKnown RBP17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 TAF6LQ9Y6J9 622 aa17.25■□□□□ 0.35
PPP1CA-201ENST00000312989 PFASO15067 1338 aa17.24■□□□□ 0.35
PPP1CA-201ENST00000312989 SGSM2O43147 1006 aa17.24■□□□□ 0.35
PPP1CA-201ENST00000312989 TOP1P11387 765 aaKnown RBP17.24■□□□□ 0.35
PPP1CA-201ENST00000312989 COL6A1P12109 1028 aa17.24■□□□□ 0.35
PPP1CA-201ENST00000312989 COPB2P35606 906 aa17.24■□□□□ 0.35
PPP1CA-201ENST00000312989 STAT2P52630 851 aa17.24■□□□□ 0.35
PPP1CA-201ENST00000312989 PPP4R3BQ5MIZ7 849 aa17.24■□□□□ 0.35
PPP1CA-201ENST00000312989 BTNL9Q6UXG8 535 aa17.24■□□□□ 0.35
PPP1CA-201ENST00000312989 DPP9Q86TI2 863 aa17.24■□□□□ 0.35
PPP1CA-201ENST00000312989 CHMP4CQ96CF2 233 aa17.24■□□□□ 0.35
PPP1CA-201ENST00000312989 MMP19Q99542 508 aa17.24■□□□□ 0.35
PPP1CA-201ENST00000312989 PDHBP11177 359 aa17.23■□□□□ 0.35
PPP1CA-201ENST00000312989 MFSD14CQ5VZR4 134 aa17.23■□□□□ 0.35
PPP1CA-201ENST00000312989 TTBK2Q6IQ55 1244 aa17.23■□□□□ 0.35
PPP1CA-201ENST00000312989 FAM160B2Q86V87 743 aa17.23■□□□□ 0.35
PPP1CA-201ENST00000312989 CPXCR1Q8N123 301 aa17.23■□□□□ 0.35
PPP1CA-201ENST00000312989 DCAF4Q8WV16 495 aa17.23■□□□□ 0.35
PPP1CA-201ENST00000312989 ANKS1AQ92625 1134 aa17.23■□□□□ 0.35
PPP1CA-201ENST00000312989 RNF41Q9H4P4 317 aaPredicted RBP17.23■□□□□ 0.35
PPP1CA-201ENST00000312989 TOMM22Q9NS69 142 aa17.23■□□□□ 0.35
PPP1CA-201ENST00000312989 DDX20Q9UHI6 824 aaKnown RBP17.23■□□□□ 0.35
PPP1CA-201ENST00000312989 PRR12Q9ULL5 1215 aa17.23■□□□□ 0.35
PPP1CA-201ENST00000312989 ZBED4O75132 1171 aa17.22■□□□□ 0.35
PPP1CA-201ENST00000312989 KDM4AO75164 1064 aa17.22■□□□□ 0.35
PPP1CA-201ENST00000312989 TAL1P17542 331 aaPredicted RBP17.22■□□□□ 0.35
PPP1CA-201ENST00000312989 SNAP25P60880 206 aa17.22■□□□□ 0.35
PPP1CA-201ENST00000312989 ESR2Q92731 530 aa17.22■□□□□ 0.35
PPP1CA-201ENST00000312989 TTC14Q96N46 770 aa17.22■□□□□ 0.35
PPP1CA-201ENST00000312989 ZKSCAN3Q9BRR0 538 aa17.22■□□□□ 0.35
PPP1CA-201ENST00000312989 DIS3Q9Y2L1 958 aaKnown RBP17.22■□□□□ 0.35
PPP1CA-201ENST00000312989 B4E1Z4 1266 aa17.21■□□□□ 0.35
PPP1CA-201ENST00000312989 NT5C2P49902 561 aa17.21■□□□□ 0.35
PPP1CA-201ENST00000312989 KCTD2Q14681 263 aa17.21■□□□□ 0.35
PPP1CA-201ENST00000312989 PRAMEF19Q5SWL8 479 aa17.21■□□□□ 0.35
PPP1CA-201ENST00000312989 AGBL1Q96MI9 1066 aa17.21■□□□□ 0.35
PPP1CA-201ENST00000312989 RANBP17Q9H2T7 1088 aaKnown RBP17.21■□□□□ 0.35
PPP1CA-201ENST00000312989 ZSWIM5Q9P217 1185 aa17.21■□□□□ 0.35
PPP1CA-201ENST00000312989 ASTN1O14525 1302 aa17.2■□□□□ 0.34
PPP1CA-201ENST00000312989 H0YGN5 161 aa17.2■□□□□ 0.34
PPP1CA-201ENST00000312989 CYP21A2P08686 494 aa17.2■□□□□ 0.34
PPP1CA-201ENST00000312989 FDX1P10109 184 aa17.2■□□□□ 0.34
PPP1CA-201ENST00000312989 SLC16A2P36021 539 aa17.2■□□□□ 0.34
PPP1CA-201ENST00000312989 ZNF543Q08ER8 600 aa17.2■□□□□ 0.34
PPP1CA-201ENST00000312989 IMMTQ16891 758 aaKnown RBP17.2■□□□□ 0.34
PPP1CA-201ENST00000312989 CENPQQ7L2Z9 268 aaPredicted RBP17.2■□□□□ 0.34
PPP1CA-201ENST00000312989 DGKHQ86XP1 1220 aa17.2■□□□□ 0.34
PPP1CA-201ENST00000312989 CHURC1Q8WUH1 139 aa17.2■□□□□ 0.34
PPP1CA-201ENST00000312989 FRMPD2Q68DX3 1309 aaPredicted RBP17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 DNAH12Q6ZR08 3092 aa17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 FRMPD3Q5JV73 1810 aa17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 ZNF865P0CJ78 1059 aaPredicted RBP17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 MAMDC4Q6UXC1 1216 aa17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 STOX1Q6ZVD7 989 aa17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 NECAB2Q7Z6G3 386 aa17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 ENAHQ8N8S7 591 aaPredicted RBP17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 CHST13Q8NET6 341 aa17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 TINF2Q9BSI4 451 aa17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 PRO3102Q9H379 93 aa17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 A1CFQ9NQ94 594 aaKnown RBP17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 CTNNA3Q9UI47 895 aa17.19■□□□□ 0.34
PPP1CA-201ENST00000312989 SEPT4O43236 478 aa17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 SNAI1O95863 264 aaPredicted RBP17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 COL9A3Q14050 684 aaPredicted RBP17.18■□□□□ 0.34
PPP1CA-201ENST00000312989 SEC23AQ15436 765 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms